CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSMMUP00000029747
(
Macaca fascicularis
)
Rel
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00554 (RHD_DNA_bind)
IPR011539
ENSMMUP00000029747
T317768_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NFATC1
M03449_2.00
Homo sapiens
HKGRAAADDNWBTTTCCAYN
NRTGGAAAVWNHHTTTYCMD
SELEX
Jolma et al.(2013)
NFATC1_1
1.000
1.000
NFATC1
M03450_2.00
Homo sapiens
TTTCCAYWRYGGAAA
TTTCCRYWRTGGAAA
SELEX
Jolma et al.(2013)
NFATC1_2
1.000
1.000
NFATC1
M03451_2.00
Homo sapiens
NTTTCCATGGAAAN
NTTTCCATGGAAAN
SELEX
Jolma et al.(2013)
NFATC1_3
1.000
1.000
NFATC1
M02747_2.00
Homo sapiens
DTTCCRYGGAA
TTCCRYGGAAH
SELEX
Jolma et al.(2010)
NFATc1_dimer
1.000
1.000
NFATC1
M02748_2.00
Homo sapiens
GGAANDTTCC
GGAAHNTTCC
SELEX
Jolma et al.(2010)
NFATc1_dimer_type2
1.000
1.000
NFATC1
M02749_2.00
Homo sapiens
WDTTTCCAY
RTGGAAAHW
SELEX
Jolma et al.(2010)
NFATc1_monomer
1.000
1.000
NFATC1
M05711_2.00
Homo sapiens
NTTTCCATGGAAAN
NTTTCCATGGAAAN
SELEX
Yin et al.(2017)
NFATC1_eDBD_HT-SELEX_1
1.000
1.000
NFATC1
M05712_2.00
Homo sapiens
NTTTCCRYNNRYGGAAAN
NTTTCCRYNNRYGGAAAN
SELEX
Yin et al.(2017)
NFATC1_eDBD_HT-SELEX_2
1.000
1.000
NFATC1
M09349_2.00
Homo sapiens
HBYHWBWBTTTCCWB
VWGGAAAVWVWDRVD
Misc
Kulakovskiy et al.(2013)
NFAC1_HUMAN.H11MO.0.B
1.000
1.000
NFATC1
M09625_2.00
Homo sapiens
WBTTTCCAYY
RRTGGAAAVW
Misc
Heinz et al.(2010)
Jurkat-NFATC1_Jolma_et_al.
1.000
1.000
NFATC1
M11232_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NFAT2_Q4
1.000
1.000
NFATC1
M11233_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NFAT2_Q5_01
1.000
1.000
NFATC1
M11234_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NFAT2_Q5
1.000
1.000
NFATC1
M05713_2.00
Homo sapiens
NTTTCCRYGGAAAN
NTTTCCRYGGAAAN
SELEX
Yin et al.(2017)
NFATC1_eDBD_Methyl-HT-SELEX_1
1.000
1.000
NFATC1
M05714_2.00
Homo sapiens
NTTTCCRYNNRYGGAAAN
NTTTCCRYNNRYGGAAAN
SELEX
Yin et al.(2017)
NFATC1_eDBD_Methyl-HT-SELEX_2
1.000
1.000
NFATC1
M02444_2.00
Monodelphis domestica
NNDTTCCDNN
NNHGGAAHNN
PBM
Weirauch et al.(2014)
pTH8401
0.944
0.944
Nfatc1
M09360_2.00
Mus musculus
KABTCANWBTTTCCW
WGGAAAVWNTGAVTM
Misc
Kulakovskiy et al.(2013)
NFAC1_MOUSE.H11MO.0.A
0.923
0.923
NFATC1
M02443_2.00
Meleagris gallopavo
NNTTTCCRNN
NNYGGAAANN
PBM
Weirauch et al.(2014)
pTH8315
0.916
0.916
nfatc1
M02446_2.00
Xenopus tropicalis
NNTTTCCRNN
NNYGGAAANN
PBM
Weirauch et al.(2014)
pTH8557
0.895
0.895
NFATC3
M02440_2.00
Homo sapiens
DNTTTCCRNN
NNYGGAAANH
PBM
Weirauch et al.(2014)
pTH9192
0.839
0.839
NFATC3
M05693_2.00
Homo sapiens
WNTTTCCRYN
NRYGGAAANW
SELEX
Yin et al.(2017)
NFATC3_eDBD_HT-SELEX_1
0.839
0.839
NFATC3
M05694_2.00
Homo sapiens
NTTTCCATGGAAAN
NTTTCCATGGAAAN
SELEX
Yin et al.(2017)
NFATC3_eDBD_HT-SELEX_2
0.839
0.839
NFATC3
M05695_2.00
Homo sapiens
DYGGAAANNNNNNNTTTCCRH
DYGGAAANNNNNNNTTTCCRH
SELEX
Yin et al.(2017)
NFATC3_eDBD_HT-SELEX_3
0.839
0.839
NFATC3
M09343_2.00
Homo sapiens
RDTTTTCCA
TGGAAAAHY
Misc
Kulakovskiy et al.(2013)
NFAC3_HUMAN.H11MO.0.B
0.839
0.839
Nfatc3
M09359_2.00
Mus musculus
RDTTTTCCA
TGGAAAAHY
Misc
Kulakovskiy et al.(2013)
NFAC3_MOUSE.H11MO.0.B
0.839
0.839
NFATC3
M11217_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NFAT4_Q3
0.839
0.839
NFATC3
M11218_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NFAT4_Q5
0.839
0.839
NFATC3
M05696_2.00
Homo sapiens
WNTTTCCRYN
NRYGGAAANW
SELEX
Yin et al.(2017)
NFATC3_eDBD_Methyl-HT-SELEX_1
0.839
0.839
NFATC3
M05697_2.00
Homo sapiens
NTTTCCRYGGAAAN
NTTTCCRYGGAAAN
SELEX
Yin et al.(2017)
NFATC3_eDBD_Methyl-HT-SELEX_2
0.839
0.839
NFATC3
M05698_2.00
Homo sapiens
RYGGAAANHNNNDNTTTCCRY
RYGGAAANHNNNDNTTTCCRY
SELEX
Yin et al.(2017)
NFATC3_eDBD_Methyl-HT-SELEX_3
0.839
0.839
Nfatc2
M09357_2.00
Mus musculus
NWTTTTCCW
WGGAAAAWN
Misc
Kulakovskiy et al.(2013)
NFAC2_MOUSE.H11MO.0.C
0.832
0.832
NFATC2
M02441_2.00
Homo sapiens
WNTTTCCRHN
NDYGGAAANW
PBM
Weirauch et al.(2014)
pTH9196
0.818
0.818
NFATC2
M05705_2.00
Homo sapiens
DTTTCCATGGAAAM
KTTTCCATGGAAAH
SELEX
Yin et al.(2017)
NFATC2_eDBD_HT-SELEX_1
0.818
0.818
NFATC2
M05706_2.00
Homo sapiens
NTTTCCRYNNRYGGAAAN
NTTTCCRYNNRYGGAAAN
SELEX
Yin et al.(2017)
NFATC2_eDBD_HT-SELEX_2
0.818
0.818
NFATC2
M09346_2.00
Homo sapiens
NWTTTTCCW
WGGAAAAWN
Misc
Kulakovskiy et al.(2013)
NFAC2_HUMAN.H11MO.0.B
0.818
0.818
NFATC2
M11221_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NFAT1_Q4
0.818
0.818
NFATC2
M11222_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NFAT1_Q5
0.818
0.818
NFATC2
M11223_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NFAT1_Q6
0.818
0.818
NFATC2
M08462_2.00
Homo sapiens
TTTTCCA
TGGAAAA
COMPILED
Mathelier et al.(2014)
MA0152.1
0.818
0.818
NFATC2
M05707_2.00
Homo sapiens
NTTTCCGCGGAAAN
NTTTCCGCGGAAAN
SELEX
Yin et al.(2017)
NFATC2_eDBD_Methyl-HT-SELEX_1
0.818
0.818
NFATC2
M05708_2.00
Homo sapiens
NTTTCCRYNNRYGGAAAN
NTTTCCRYNNRYGGAAAN
SELEX
Yin et al.(2017)
NFATC2_eDBD_Methyl-HT-SELEX_2
0.818
0.818
NFATC4
M01306_2.00
Homo sapiens
NNNWWWVYRN
NYRBWWWNNN
PBM
Lambert et al.(2019)
pTH9347
0.790
0.790
NFATC4
M05701_2.00
Homo sapiens
DBTTTCCRYN
NRYGGAAAVH
SELEX
Yin et al.(2017)
NFATC4_eDBD_HT-SELEX_1
0.790
0.790
NFATC4
M05702_2.00
Homo sapiens
NKTTCCATGGAAMV
BKTTCCATGGAAMN
SELEX
Yin et al.(2017)
NFATC4_eDBD_HT-SELEX_2
0.790
0.790
NFATC4
M09345_2.00
Homo sapiens
HNDBTTTCCN
NGGAAAVHND
Misc
Kulakovskiy et al.(2013)
NFAC4_HUMAN.H11MO.0.C
0.790
0.790
Nfatc4
M09354_2.00
Mus musculus
HNDBTTTCCN
NGGAAAVHND
Misc
Kulakovskiy et al.(2013)
NFAC4_MOUSE.H11MO.0.C
0.790
0.790
NFATC4
M11219_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NFAT3_Q3_01
0.790
0.790
NFATC4
M11220_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NFAT3_Q3
0.790
0.790
NFATC4
M05703_2.00
Homo sapiens
DNTTTCCRYN
NRYGGAAANH
SELEX
Yin et al.(2017)
NFATC4_eDBD_Methyl-HT-SELEX_1
0.790
0.790
NFATC4
M05704_2.00
Homo sapiens
NKTTCCRYGGAAMN
NKTTCCRYGGAAMN
SELEX
Yin et al.(2017)
NFATC4_eDBD_Methyl-HT-SELEX_2
0.790
0.790
ENSTNIG00000018271
M02445_2.00
Tetraodon nigroviridis
DNDTTCCRNN
NNYGGAAHNH
PBM
Weirauch et al.(2014)
pTH9005
0.755
0.755
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMMUP00000029747
Rel
363
523
LRIEVQPKSHHRAHYETEGSRGAVKASAGGHPIVQLHGYLESEPLMLQLFIGTADDRLLRPHAFYQVHRITGKTVSTTSHEAILSNTKVLEIPLLPENSMRAVIDCAGILKLRNSDIELRKGETDIGRKNTRVRLVFRVHVPQPSGRTLSLQVASNPIECS
Links
Other
Rel
family TFs
Other
Macaca fascicularis
TFs
241 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BRADI3G05510
Brachypodium distachyon
BRADI3G05510
I
GSMUA_Achr4G12470_001
Musa acuminata
GSMUA_Achr4G12470_001
I
GSMUA_Achr9G23140_001
Musa acuminata
GSMUA_Achr9G23140_001
I
PGSC0003DMG400026736
Solanum tuberosum
PGSC0003DMG400026736
I
POPTR_0001s13890
Populus trichocarpa
POPTR_0001s13890
I
POPTR_0003s17120
Populus trichocarpa
POPTR_0003s17120
I
VIT_01s0010g03710
Vitis vinifera
VIT_01s0010g03710
I
Ca_11356
Cicer arietinum
Ca_11356
I
29929.m004641
Ricinus communis
29929.m004641
I
mgf019346m
Mimulus guttatus
mgf019346m
I
Aquca_018_00218
Aquilegia coerulea
Aquca_018_00218
I
Eucgr.B03500
Eucalyptus grandis
Eucgr.B03500
I
evm.TU.supercontig_43.66
Carica papaya
evm.TU.supercontig_43.66
I
Lus10006411.g
Linum usitatissimum
Lus10006411.g
I
Lus10011356.g
Linum usitatissimum
Lus10011356.g
I
SapurV1A.0056s0240
Salix purpurea
SapurV1A.0056s0240
I
SapurV1A.1271s0060
Salix purpurea
SapurV1A.1271s0060
I
SPL2
Arabidopsis thaliana
AT5G43270
N
SPL3
Oryza indica
BGIOSGA007499
N
BGIOSGA007643
Oryza indica
BGIOSGA007643
N
SPL12
Oryza indica
BGIOSGA020577
N
BGIOSGA020731
Oryza indica
BGIOSGA020731
N
Bo7g065290
Brassica oleracea
Bo7g065290
N
Bo9g058970
Brassica oleracea
Bo9g058970
N
Bra027478
Brassica rapa
Bra027478
N
Bra033671
Brassica rapa
Bra033671
N
BRADI3G03510
Brachypodium distachyon
BRADI3G03510
N
F775_31908
Aegilops tauschii
F775_31908
N
GLYMA11G36980
Glycine max
GLYMA11G36980
N
GRMZM2G065451
Zea mays
GRMZM2G065451
N
GRMZM2G097275
Zea mays
GRMZM2G097275
N
GRMZM2G126827
Zea mays
GRMZM2G126827
N
GRMZM2G156621
Zea mays
GRMZM2G156621
N
GRMZM2G163813
Zea mays
GRMZM2G163813
N
GRMZM2G414805
Zea mays
GRMZM2G414805
N
GSMUA_Achr10G02970_001
Musa acuminata
GSMUA_Achr10G02970_001
N
GSMUA_Achr3G05360_001
Musa acuminata
GSMUA_Achr3G05360_001
N
GSMUA_Achr3G27750_001
Musa acuminata
GSMUA_Achr3G27750_001
N
GSMUA_Achr4G05720_001
Musa acuminata
GSMUA_Achr4G05720_001
N
GSMUA_Achr5G21990_001
Musa acuminata
GSMUA_Achr5G21990_001
N
GSMUA_Achr5G22630_001
Musa acuminata
GSMUA_Achr5G22630_001
N
GSMUA_Achr6G36010_001
Musa acuminata
GSMUA_Achr6G36010_001
N
GSMUA_Achr8G23820_001
Musa acuminata
GSMUA_Achr8G23820_001
N
GSMUA_Achr9G14160_001
Musa acuminata
GSMUA_Achr9G14160_001
N
LPERR02G02980
Leersia perrieri
LPERR02G02980
N
LPERR02G04880
Leersia perrieri
LPERR02G04880
N
LPERR06G19770
Leersia perrieri
LPERR06G19770
N
LPERR06G22200
Leersia perrieri
LPERR06G22200
N
MLOC_11199
Hordeum vulgare
MLOC_11199
N
MLOC_62426
Hordeum vulgare
MLOC_62426
N
MTR_3g085180
Medicago truncatula
MTR_3g085180
N
OB02G12930
Oryza brachyantha
OB02G12930
N
OB02G14840
Oryza brachyantha
OB02G14840
N
OB06G31550
Oryza brachyantha
OB06G31550
N
OB06G34330
Oryza brachyantha
OB06G34330
N
OBART02G03260
Oryza barthii
OBART02G03260
N
OBART06G23820
Oryza barthii
OBART06G23820
N
OBART06G26610
Oryza barthii
OBART06G26610
N
OGLUM02G05530
Oryza glumaepatula
OGLUM02G05530
N
OGLUM06G25070
Oryza glumaepatula
OGLUM06G25070
N
OGLUM06G28030
Oryza glumaepatula
OGLUM06G28030
N
OLONG_012160
Oryza longistaminata
OLONG_012160
N
OLONG_025693
Oryza longistaminata
OLONG_025693
N
OMERI02G03900
Oryza meridionalis
OMERI02G03900
N
OMERI02G06420
Oryza meridionalis
OMERI02G06420
N
OMERI06G23750
Oryza meridionalis
OMERI06G23750
N
OMERI06G26720
Oryza meridionalis
OMERI06G26720
N
ONIVA02G03070
Oryza nivara
ONIVA02G03070
N
ONIVA02G05960
Oryza nivara
ONIVA02G05960
N
ONIVA06G27990
Oryza nivara
ONIVA06G27990
N
ONIVA06G29160
Oryza nivara
ONIVA06G29160
N
OPUNC02G02570
Oryza punctata
OPUNC02G02570
N
OPUNC02G04800
Oryza punctata
OPUNC02G04800
N
OPUNC06G24320
Oryza punctata
OPUNC06G24320
N
ORGLA02G0030600
Oryza glaberrima
ORGLA02G0030600
N
ORGLA02G0051400
Oryza glaberrima
ORGLA02G0051400
N
ORGLA06G0199900
Oryza glaberrima
ORGLA06G0199900
N
ORGLA06G0222300
Oryza glaberrima
ORGLA06G0222300
N
ORUFI02G03180
Oryza rufipogon
ORUFI02G03180
N
ORUFI02G05750
Oryza rufipogon
ORUFI02G05750
N
ORUFI06G25590
Oryza rufipogon
ORUFI06G25590
N
ORUFI06G28570
Oryza rufipogon
ORUFI06G28570
N
OS02G0139400
Oryza sativa
OS02G0139400
N
SPL4
Oryza sativa
OS02G0174100
N
SPL11
Oryza sativa
OS06G0663500
N
SPL12
Oryza sativa
OS06G0703500
N
PGSC0003DMG400034310
Solanum tuberosum
PGSC0003DMG400034310
N
PRUPE_ppa005013mg
Prunus persica
PRUPE_ppa005013mg
N
Sb04g003175
Sorghum bicolor
Sb04g003175
N
Sb04g004940
Sorghum bicolor
Sb04g004940
N
Sb10g029190
Sorghum bicolor
Sb10g029190
N
SPL2
Arabidopsis lyrata
scaffold_800740.1
N
Si006472m.g
Setaria italica
Si006472m.g
N
Si017520m.g
Setaria italica
Si017520m.g
N
Si017749m.g
Setaria italica
Si017749m.g
N
TCM_008772
Theobroma cacao
TCM_008772
N
Traes_6AS_32A35158A
Triticum aestivum
Traes_6AS_32A35158A
N
Traes_6AS_99C6A3B0B
Triticum aestivum
Traes_6AS_99C6A3B0B
N
Traes_6BS_F50663DF7
Triticum aestivum
Traes_6BS_F50663DF7
N
Traes_6DS_7B1596298
Triticum aestivum
Traes_6DS_7B1596298
N
Traes_6DS_C4D93239C
Triticum aestivum
Traes_6DS_C4D93239C
N
TRIUR3_09477
Triticum urartu
TRIUR3_09477
N
Pm007020
Prunus mume
Pm007020
N
cassava12059.valid.m1
Manihot esculenta
cassava12059.valid.m1
N
cassava6540.valid.m1
Manihot esculenta
cassava6540.valid.m1
N
mgf010397m
Mimulus guttatus
mgf010397m
N
Bostr.3148s0148
Boechera stricta
Bostr.3148s0148
N
Cagra.8694s0002
Capsella grandiflora
Cagra.8694s0002
N
Carubv10026434m.g
Capsella rubella
Carubv10026434m.g
N
Ciclev10031391m.g
Citrus clementina
Ciclev10031391m.g
N
Gorai.002G182700
Gossypium raimondii
Gorai.002G182700
N
MDP0000155354
Malus domestica
MDP0000155354
N
orange1.1g011640m.g
Citrus sinensis
orange1.1g011640m.g
N
Pavir.Aa03225
Panicum virgatum
Pavir.Aa03225
N
Pavir.Ab00358
Panicum virgatum
Pavir.Ab00358
N
Pavir.Ab00499
Panicum virgatum
Pavir.Ab00499
N
Pavir.J20730
Panicum virgatum
Pavir.J20730
N
Thhalv10003215m.g
Eutrema salsugineum
Thhalv10003215m.g
N
PK16953.1
Cannabis sativa
PK16953.1
N
LjSGA_017270.1
Lotus japonicus
LjSGA_017270.1
N
LjSGA_032871.1
Lotus japonicus
LjSGA_032871.1
N