Cob_11986 (Colletotrichum orbiculare)
RFX

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02257 (RFX_DNA_binding) IPR003150 Cob_11986 T318077_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RFX1
M00066_2.00 		Saccharomyces cerevisiae
NSGTTGCYAN
NTRGCAACSN		 PBM
Badis et al.(2008)
RFX1_4537 		0.671 0.500
RFX1
M07494_2.00 		Saccharomyces cerevisiae
BGTTRCYA
TRGYAACV		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0365.1 		0.671 0.500
RFX1
M08600_2.00 		Saccharomyces cerevisiae
CGTYRBYAYRGYWACM
KGTWRCYRTRVYRACG		 Misc
DeBoer et al.(2011)
YLR176C_1478 		0.671 0.500
RFX1
M08601_2.00 		Saccharomyces cerevisiae
BGTTRCYA
TRGYAACV		 Misc
DeBoer et al.(2011)
YLR176C_496 		0.671 0.500
RFX1
M11251_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$RFX1_02 		0.671 0.500
daf-19
M00709_2.00 		Caenorhabditis elegans
SGTTRCTADG
CHTAGYAACS		 PBM
Narasimhan et al.(2015)
pTH10021 		0.656 0.462
For this family, TFs with SR scores > 0.650 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENH78828 RFX 168 245

Links

Other RFX family TFs
Other Colletotrichum orbiculare TFs

228 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
daf-19 Caenorhabditis elegans WBGene00000914 D 0.656
RFX1 Saccharomyces cerevisiae YLR176C D 0.671
AMAG_10999 Allomyces macrogynus AMAG_10999 I 0.652
AMAG_11601 Allomyces macrogynus AMAG_11601 I 0.652
CAOG_00356 Capsaspora owczarzaki CAOG_00356 I 0.671
CIMG_05985 Coccidioides immitis CIMG_05985 I 0.724
CLUG_05348 Candida lusitaniae CLUG_05348 I 0.676
CPAG_04140 Candida parapsilosis CPAG_04140 I 0.671
MCYG_06867 Microsporum canis MCYG_06867 I 0.724
PGUG_04792 Candida guilliermondii PGUG_04792 I 0.669
SNOG_15366 Stagonospora nodorum SNOG_15366 I 0.733
VDBG_04171 Verticillium albo atrum VDBG_04171 I 0.770
A1O1_08600 Capronia coronata A1O1_08600 I 0.712
A1O3_08026 Capronia epimyces A1O3_08026 I 0.713
A1O5_04383 Cladophialophora psammophila A1O5_04383 I 0.712
A1O7_03561 Cladophialophora yegresii A1O7_03561 I 0.713
A1O9_03272 Exophiala aquamarina A1O9_03272 I 0.713
AACERI_AaceriAAL010W Saccharomycetaceae sp ashbya aceri AACERI_AaceriAAL010W I 0.676
ACRE_029400 Acremonium chrysogenum ACRE_029400 I 0.720
ACYPI002124 Acyrthosiphon pisum ACYPI002124 I 0.663
ADAC010162 Anopheles darlingi ADAC010162 I 0.650
AGOS_AAL010W Ashbya gossypii AGOS_AAL010W I 0.676
AOL_s00215g602 Arthrobotrys oligospora AOL_s00215g602 I 0.701
Aqu1.223787 Amphimedon queenslandica Aqu1.223787 I 0.651
ARB_07111 Arthroderma benhamiae ARB_07111 I 0.724
AUEXF2481DRAFT_78728 Aureobasidium subglaciale AUEXF2481DRAFT_78728 I 0.730
BAUCODRAFT_23427 Baudoinia compniacensis BAUCODRAFT_23427 I 0.725
BBA_07182 Beauveria bassiana BBA_07182 I 0.769
Bcin03g02360 Botrytis cinerea Bcin03g02360 I 0.756
BDDG_02784 Blastomyces dermatitidis BDDG_02784 I 0.717
BGHDH14_bgh05888 Blumeria graminis BGHDH14_bgh05888 I 0.743
BN7_2967 Wickerhamomyces ciferrii BN7_2967 I 0.682
ACLA_009440 Aspergillus clavatus CADACLAG00001004 I 0.726
CADAFLAG00010851 Aspergillus flavus CADAFLAG00010851 I 0.726
AFUA_5G06120 Aspergillus fumigatus CADAFUAG00006202 I 0.726
CADANGAG00013568 Aspergillus niger CADANGAG00013568 I 0.726
ANIA_02296 Aspergillus nidulans CADANIAG00008989 I 0.725
CADAORAG00004061 Aspergillus oryzae CADAORAG00004061 I 0.726
ATEG_09416 Aspergillus terreus CADATEAG00008983 I 0.726
NFIA_036980 Neosartorya fischeri CADNFIAG00003299 I 0.726
CAGL0B04895g Candida glabrata CAGL0B04895g I 0.670
CAGL0H03751g Candida glabrata CAGL0H03751g I 0.660
CaO19.11346 Candida albicans CaO19.11346 I 0.673
CaO19.3865 Candida albicans CaO19.3865 I 0.673
CapteG168129 Capitella teleta CapteG168129 I 0.651
CCM_03895 Cordyceps militaris CCM_03895 I 0.771
CD36_31600 Candida dubliniensis CD36_31600 I 0.673
CFIO01_07583 Colletotrichum fioriniae CFIO01_07583 I 0.774
CGGC5_15149 Colletotrichum gloeosporioides CGGC5_15149 I 0.772
CH063_09103 Colletotrichum higginsianum CH063_09103 I 0.774
CLUG_05348 Clavispora lusitaniae CLUG_05348 I 0.676
CMQ_5960 Grosmannia clavigera CMQ_5960 I 0.769
COCC4DRAFT_162970 Bipolaris maydis COCC4DRAFT_162970 I 0.731
COCCADRAFT_29061 Bipolaris zeicola COCCADRAFT_29061 I 0.731
COCMIDRAFT_23254 Bipolaris oryzae COCMIDRAFT_23254 I 0.731
COCSADRAFT_34318 Bipolaris sorokiniana COCSADRAFT_34318 I 0.731
COCVIDRAFT_40879 Bipolaris victoriae COCVIDRAFT_40879 I 0.731
CORT_0D05100 Candida orthopsilosis CORT_0D05100 I 0.671
CPC735_025690 Coccidioides posadasii CPC735_025690 I 0.724
CPUR_03868 Claviceps purpurea CPUR_03868 I 0.769
CSUB01_01029 Colletotrichum sublineola CSUB01_01029 I 0.774
CTHT_0028340 Chaetomium thermophilum CTHT_0028340 I 0.755
CTRG_00624 Candida tropicalis CTRG_00624 I 0.666
DEHA2G10868g Debaryomyces hansenii DEHA2G10868g I 0.687
DOTSEDRAFT_132769 Dothistroma septosporum DOTSEDRAFT_132769 I 0.726
DRE_06212 Drechslerella stenobrocha DRE_06212 I 0.700
EPUS_04947 Endocarpon pusillum EPUS_04947 I 0.712
EURHEDRAFT_516724 Aspergillus ruber EURHEDRAFT_516724 I 0.726
EV44_g5273 Erysiphe necator EV44_g5273 I 0.760
F503_07504 Ophiostoma piceae uamh F503_07504 I 0.767
FFUJ_02499 Fusarium fujikuroi FFUJ_02499 I 0.758
FGRRES_07420 Fusarium graminearum FGRRES_07420 I 0.756
FOXG_01471 Fusarium oxysporum FOXG_01471 I 0.758
FPSE_09383 Fusarium pseudograminearum FPSE_09383 I 0.741
FVEG_07837 Fusarium verticillioides FVEG_07837 I 0.758
G210_0560 Candida maltosa G210_0560 I 0.665
G647_04815 Cladophialophora carrionii G647_04815 I 0.712
GGTG_07952 Gaeumannomyces graminis GGTG_07952 I 0.769
GLRG_03233 Colletotrichum graminicola GLRG_03233 I 0.770
GMDG_00789 Pseudogymnoascus destructans GMDG_00789 I 0.760
GNLVRS01_PISO0E08012g Millerozyma farinosa GNLVRS01_PISO0E08012g I 0.686
GNLVRS01_PISO0F09355g Millerozyma farinosa GNLVRS01_PISO0F09355g I 0.686
GSTUM_00005211001 Tuber melanosporum GSTUM_00005211001 I 0.672
H072_327 Dactylellina haptotyla H072_327 I 0.701
H101_06747 Trichophyton interdigitale H101_06747 I 0.724
H102_04304 Trichophyton rubrum H102_04304 I 0.724
H105_04329 Trichophyton soudanense H105_04329 I 0.722
HCBG_05483 Histoplasma capsulatum HCBG_05483 I 0.722
HelroG70386 Helobdella robusta HelroG70386 I 0.654
HMPREF1120_04684 Exophiala dermatitidis HMPREF1120_04684 I 0.712
HMPREF1541_04667 Cyphellophora europaea HMPREF1541_04667 I 0.712
HMPREF1624_04412 Sporothrix schenckii HMPREF1624_04412 I 0.761
HPODL_00388 Ogataea parapolymorpha HPODL_00388 I 0.656
KAFR_0H03130 Kazachstania africana KAFR_0H03130 I 0.656
KAFR_0I02180 Kazachstania africana KAFR_0I02180 I 0.672
KGM_13721 Danaus plexippus KGM_13721 I 0.655
KLTH0H12144g Lachancea thermotolerans KLTH0H12144g I 0.678
KNAG_0I01300 Kazachstania naganishii KNAG_0I01300 I 0.675
Kpol_457p14 Vanderwaltozyma polyspora Kpol_457p14 I 0.672
L798_03671 Zootermopsis nevadensis L798_03671 I 0.651
LALA0_S03e09428g Lachancea lanzarotensis LALA0_S03e09428g I 0.684
LELG_03203 Lodderomyces elongisporus LELG_03203 I 0.666
LEMA_P019700.1 Leptosphaeria maculans LEMA_P019700.1 I 0.733
M437DRAFT_81253 Aureobasidium melanogenum M437DRAFT_81253 I 0.730
M438DRAFT_393589 Aureobasidium pullulans M438DRAFT_393589 I 0.730
MAC_02434 Metarhizium acridum MAC_02434 I 0.771
MAJ_05697 Metarhizium majus MAJ_05697 I 0.769
MAM_06665 Metarhizium album MAM_06665 I 0.771
MANI_023048 Metarhizium anisopliae MANI_023048 I 0.769
MAPG_07750 Magnaporthe poae MAPG_07750 I 0.769
MBM_03129 Marssonina brunnea MBM_03129 I 0.760
MBR_03889 Metarhizium brunneum MBR_03889 I 0.768
MCYG_06867 Arthroderma otae MCYG_06867 I 0.724
MGG_04000 Magnaporthe oryzae MGG_04000 I 0.746
MGU_07283 Metarhizium guizhouense MGU_07283 I 0.769
MGYG_03742 Microsporum gypseum MGYG_03742 I 0.724
MPH_13091 Macrophomina phaseolina MPH_13091 I 0.726
MYCFIDRAFT_10959 Pseudocercospora fijiensis MYCFIDRAFT_10959 I 0.726
Mycgr3G110369 Zymoseptoria tritici Mycgr3G110369 I 0.728
MYCTH_2301302 Myceliophthora thermophila MYCTH_2301302 I 0.753
NCAS_0C04880 Naumovozyma castellii NCAS_0C04880 I 0.675
NDAI_0G04240 Naumovozyma dairenensis NDAI_0G04240 I 0.675
NechaG49316 Fusarium solani NechaG49316 I 0.772
NEMVEDRAFT_v1g96414 Nematostella vectensis NEMVEDRAFT_v1g96414 I 0.659
NEUTE1DRAFT_119738 Neurospora tetrasperma NEUTE1DRAFT_119738 I 0.761
OCS_02678 Ophiocordyceps sinensis OCS_02678 I 0.767
OIDMADRAFT_184073 Oidiodendron maius OIDMADRAFT_184073 I 0.740
PAAG_00480 Paracoccidioides sp lutzii PAAG_00480 I 0.722
PABG_06744 Paracoccidioides brasiliensis PABG_06744 I 0.720
PAS_chr2-2_0153 Komagataella pastoris PAS_chr2-2_0153 I 0.680
PCH_Pc20g01690 Penicillium rubens PCH_Pc20g01690 I 0.723
PDE_02161 Penicillium oxalicum PDE_02161 I 0.724
PDIP_47410 Penicillium digitatum PDIP_47410 I 0.723
PEX1_087840 Penicillium expansum PEX1_087840 I 0.723
PFICI_07890 Pestalotiopsis fici PFICI_07890 I 0.756
PGUG_04792 Meyerozyma guilliermondii PGUG_04792 I 0.669
PHUM236330 Pediculus humanus PHUM236330 I 0.651
PICST_78645 Scheffersomyces stipitis PICST_78645 I 0.686
PITC_028740 Penicillium italicum PITC_028740 I 0.723
PMAA_084960 Talaromyces marneffei PMAA_084960 I 0.720
PNEG_02893 Pneumocystis murina PNEG_02893 I 0.678
PODANS_2_5740 Podospora anserina PODANS_2_5740 I 0.708
PTRG_01267 Pyrenophora triticirepentis PTRG_01267 I 0.727
PTT_09109 Pyrenophora teres PTT_09109 I 0.728
PV04_03763 Capronia semiimmersa PV04_03763 I 0.713
PV05_05335 Exophiala xenobiotica PV05_05335 I 0.712
PV06_00023 Exophiala oligosperma PV06_00023 I 0.712
PV07_06647 Cladophialophora immunda PV07_06647 I 0.713
PV08_04071 Exophiala spinifera PV08_04071 I 0.712
PV09_00065 Verruconis gallopava PV09_00065 I 0.722
PV10_05596 Exophiala mesophila PV10_05596 I 0.712
PV11_01295 Exophiala sideris PV11_01295 I 0.712
PVAR5_6603 Byssochlamys spectabilis PVAR5_6603 I 0.719
S40285_05794 Stachybotrys chlorohalonata S40285_05794 I 0.750
S40288_01173 Stachybotrys chartarum S40288_01173 I 0.750
SAPIO_CDS9685 Scedosporium apiospermum SAPIO_CDS9685 I 0.763
SBOR_6602 Sclerotinia borealis SBOR_6602 I 0.753
SEPMUDRAFT_46603 Sphaerulina musiva SEPMUDRAFT_46603 I 0.726
SETTUDRAFT_147537 Setosphaeria turcica SETTUDRAFT_147537 I 0.731
SJAG_04839 Schizosaccharomyces japonicus SJAG_04839 I 0.676
SMAC_06634 Sordaria macrospora SMAC_06634 I 0.742
SNOG_15366 Phaeosphaeria nodorum SNOG_15366 I 0.733
SOCG_01623 Schizosaccharomyces octosporus SOCG_01623 I 0.672
sak1 Schizosaccharomyces pombe SPAC3G9.14 I 0.681
SPAPADRAFT_70246 Spathaspora passalidarum SPAPADRAFT_70246 I 0.681
SPBR_05608 Sporothrix brasiliensis SPBR_05608 I 0.761
SPOG_03909 Schizosaccharomyces cryophilus SPOG_03909 I 0.671
SS1G_00575 Sclerotinia sclerotiorum SS1G_00575 I 0.752
TBLA_0C01490 Tetrapisispora blattae TBLA_0C01490 I 0.676
TDEL_0B05980 Torulaspora delbrueckii TDEL_0B05980 I 0.672
TEQG_02965 Trichophyton equinum TEQG_02965 I 0.724
TESG_00180 Trichophyton tonsurans TESG_00180 I 0.724
THITE_2107553 Thielavia terrestris THITE_2107553 I 0.747
TPHA_0B03750 Tetrapisispora phaffii TPHA_0B03750 I 0.671
TRIATDRAFT_83492 Trichoderma atroviride TRIATDRAFT_83492 I 0.771
TRIREDRAFT_69349 Trichoderma reesei TRIREDRAFT_69349 I 0.768
TRIVIDRAFT_34449 Trichoderma virens TRIVIDRAFT_34449 I 0.768
TRV_04907 Trichophyton verrucosum TRV_04907 I 0.724
TSTA_119980 Talaromyces stipitatus TSTA_119980 I 0.720
U727_0043066021 Penicillium solitum U727_0043066021 I 0.723
UCRPA7_1505 Togninia minima UCRPA7_1505 I 0.771
UREG_04378 Uncinocarpus reesii UREG_04378 I 0.724
UV8b_7132 Ustilaginoidea virens UV8b_7132 I 0.727
V499_05779 Pseudogymnoascus pannorum V499_05779 I 0.760
VDAG_01397 Verticillium dahliae VDAG_01397 I 0.770
VDBG_04171 Verticillium alfalfae VDBG_04171 I 0.770
VHEMI10038 Torrubiella hemipterigena VHEMI10038 I 0.771
W97_05844 Coniosporium apollinis W97_05844 I 0.731
X797_002751 Metarhizium robertsii X797_002751 I 0.769
YALI0_E13596g Yarrowia lipolytica YALI0_E13596g I 0.693
Z517_10332 Fonsecaea pedrosoi Z517_10332 I 0.712
Z518_01660 Rhinocladiella mackenziei Z518_01660 I 0.713
ZBAI_03427 Zygosaccharomyces bailii ZBAI_03427 I 0.673
ZBAI_08430 Zygosaccharomyces bailii ZBAI_08430 I 0.673
ZYRO0E04642g Zygosaccharomyces rouxii ZYRO0E04642g I 0.673
Aan_R008768 Calypte anna Aan_R008768 I 0.657
Cmyd_10003770 Chelonia mydas Cmyd_10003770 I 0.651
e_gw1.6.922.1 Nectria haematococca e_gw1.6.922.1 I 0.772
estExt_fgenesh1_pg.C_chr_80140 Mycosphaerella graminicola estExt_fgenesh1_pg.C_chr_80140 I 0.728
estExt_fgenesh2_pg.C_10713 Neurospora discreta estExt_fgenesh2_pg.C_10713 I 0.765
estExt_fgenesh2_pg.C_4710022 Branchiostoma floridae estExt_fgenesh2_pg.C_4710022 I 0.652
estExt_genewise1_worm.C_chr_6.10133 Pichia stipitis estExt_genewise1_worm.C_chr_6.10133 I 0.681
fgeneshMC_pg.6_#_740 Mucor circinelloides fgeneshMC_pg.6_#_740 I 0.652
gw1.15.255.1 Mycosphaerella fijiensis gw1.15.255.1 I 0.726
NCU06701 Neurospora crassa NCU06701 I 0.761
PredSwiss_ASS2010_3110.1 Pneumocystis carinii PredSwiss_ASS2010_3110.1 I 0.678
PredSwiss_CON653.4 Pneumocystis carinii PredSwiss_CON653.4 I 0.678
Scas_Contig488.2 Saccharomyces castellii Scas_Contig488.2 I 0.675
SMU15029830 Schmidtea mediterranea SMU15029830 I 0.652
14959_Multiple Saccharomyces mikatae 14959_Multiple I 0.671
16177_Multiple Saccharomyces paradoxus 16177_Multiple I 0.671
AB07822.1 Alternaria brassicicola AB07822.1 I 0.730
fgenesh1_pg.00162_#_176 Aspergillus carbonarius fgenesh1_pg.00162_#_176 I 0.726
fgenesh1_pg.C_scaffold_1001176 Cryphonectria parasitica fgenesh1_pg.C_scaffold_1001176 I 0.741
KLTH0H12144g Kluyveromyces thermotolerans KLTH0H12144g I 0.678
Kwal_214 Kluyveromyces waltii Kwal_214 I 0.678
Pc20g01690 Penicillium chrysogenum Pc20g01690 I 0.723
PMAA_084960 Penicillium marneffei PMAA_084960 I 0.720
SAKL0D08734g Lachancea kluyveri SAKL0D08734g I 0.673
XP_002492053.1 Pichia pastoris XP_002492053.1 I 0.680
AALB009562 Anopheles albimanus AALB009562 I 0.650
LLOJ001292 Lutzomyia longipalpis LLOJ001292 I 0.651
PPAI005117 Phlebotomus papatasi PPAI005117 I 0.651
DILT_0000443401 Diphyllobothrium latum DILT_0000443401 I 0.656
scaffold324-EXSNAP2012.23 Pristionchus exspectatus scaffold324-EXSNAP2012.23 I 0.657
PAS_chr3_0071 Komagataella pastoris PAS_chr3_0071 N 0.653
Z519_02210 Cladophialophora bantiana Z519_02210 N 0.670
XP_002492279.1 Pichia pastoris XP_002492279.1 N 0.653