HMPREF1541_04667 (Cyphellophora europaea)
RFX

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02257 (RFX_DNA_binding) IPR003150 HMPREF1541_04667 T318644_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RFX1
M00066_2.00 		Saccharomyces cerevisiae
NSGTTGCYAN
NTRGCAACSN		 PBM
Badis et al.(2008)
RFX1_4537 		0.673 0.487
RFX1
M07494_2.00 		Saccharomyces cerevisiae
BGTTRCYA
TRGYAACV		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0365.1 		0.673 0.487
RFX1
M08600_2.00 		Saccharomyces cerevisiae
CGTYRBYAYRGYWACM
KGTWRCYRTRVYRACG		 Misc
DeBoer et al.(2011)
YLR176C_1478 		0.673 0.487
RFX1
M08601_2.00 		Saccharomyces cerevisiae
BGTTRCYA
TRGYAACV		 Misc
DeBoer et al.(2011)
YLR176C_496 		0.673 0.487
RFX1
M11251_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$RFX1_02 		0.673 0.487
For this family, TFs with SR scores > 0.650 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ETN40390 RFX 217 294

Links

Other RFX family TFs
Other Cyphellophora europaea TFs

213 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
RFX1 Saccharomyces cerevisiae YLR176C D 0.673
CAOG_00356 Capsaspora owczarzaki CAOG_00356 I 0.660
CIMG_05985 Coccidioides immitis CIMG_05985 I 0.734
CLUG_05348 Candida lusitaniae CLUG_05348 I 0.674
CPAG_04140 Candida parapsilosis CPAG_04140 I 0.680
MCYG_06867 Microsporum canis MCYG_06867 I 0.736
PGUG_04792 Candida guilliermondii PGUG_04792 I 0.663
SNOG_15366 Stagonospora nodorum SNOG_15366 I 0.718
SPPG_01648 Spizellomyces punctatus SPPG_01648 I 0.654
VDBG_04171 Verticillium albo atrum VDBG_04171 I 0.710
A1O1_08600 Capronia coronata A1O1_08600 I 0.757
A1O3_08026 Capronia epimyces A1O3_08026 I 0.759
A1O5_04383 Cladophialophora psammophila A1O5_04383 I 0.757
A1O7_03561 Cladophialophora yegresii A1O7_03561 I 0.757
A1O9_03272 Exophiala aquamarina A1O9_03272 I 0.756
AACERI_AaceriAAL010W Saccharomycetaceae sp ashbya aceri AACERI_AaceriAAL010W I 0.680
ACRE_029400 Acremonium chrysogenum ACRE_029400 I 0.716
ACYPI002124 Acyrthosiphon pisum ACYPI002124 I 0.654
AGOS_AAL010W Ashbya gossypii AGOS_AAL010W I 0.680
AOL_s00215g602 Arthrobotrys oligospora AOL_s00215g602 I 0.705
ARB_07111 Arthroderma benhamiae ARB_07111 I 0.736
AUEXF2481DRAFT_78728 Aureobasidium subglaciale AUEXF2481DRAFT_78728 I 0.719
BAUCODRAFT_23427 Baudoinia compniacensis BAUCODRAFT_23427 I 0.713
BBA_07182 Beauveria bassiana BBA_07182 I 0.711
Bcin03g02360 Botrytis cinerea Bcin03g02360 I 0.705
BDDG_02784 Blastomyces dermatitidis BDDG_02784 I 0.732
BGHDH14_bgh05888 Blumeria graminis BGHDH14_bgh05888 I 0.690
BN7_2967 Wickerhamomyces ciferrii BN7_2967 I 0.688
ACLA_009440 Aspergillus clavatus CADACLAG00001004 I 0.732
CADAFLAG00010851 Aspergillus flavus CADAFLAG00010851 I 0.732
AFUA_5G06120 Aspergillus fumigatus CADAFUAG00006202 I 0.732
CADANGAG00013568 Aspergillus niger CADANGAG00013568 I 0.732
ANIA_02296 Aspergillus nidulans CADANIAG00008989 I 0.731
CADAORAG00004061 Aspergillus oryzae CADAORAG00004061 I 0.732
ATEG_09416 Aspergillus terreus CADATEAG00008983 I 0.732
NFIA_036980 Neosartorya fischeri CADNFIAG00003299 I 0.732
CAGL0B04895g Candida glabrata CAGL0B04895g I 0.675
CAGL0H03751g Candida glabrata CAGL0H03751g I 0.669
CaO19.11346 Candida albicans CaO19.11346 I 0.683
CaO19.3865 Candida albicans CaO19.3865 I 0.683
CCM_03895 Cordyceps militaris CCM_03895 I 0.710
CD36_31600 Candida dubliniensis CD36_31600 I 0.682
CFIO01_07583 Colletotrichum fioriniae CFIO01_07583 I 0.711
CGGC5_15149 Colletotrichum gloeosporioides CGGC5_15149 I 0.710
CH063_09103 Colletotrichum higginsianum CH063_09103 I 0.711
CLUG_05348 Clavispora lusitaniae CLUG_05348 I 0.674
CMQ_5960 Grosmannia clavigera CMQ_5960 I 0.708
Cob_11986 Colletotrichum orbiculare Cob_11986 I 0.712
COCC4DRAFT_162970 Bipolaris maydis COCC4DRAFT_162970 I 0.714
COCCADRAFT_29061 Bipolaris zeicola COCCADRAFT_29061 I 0.714
COCMIDRAFT_23254 Bipolaris oryzae COCMIDRAFT_23254 I 0.714
COCSADRAFT_34318 Bipolaris sorokiniana COCSADRAFT_34318 I 0.714
COCVIDRAFT_40879 Bipolaris victoriae COCVIDRAFT_40879 I 0.714
CORT_0D05100 Candida orthopsilosis CORT_0D05100 I 0.680
CPC735_025690 Coccidioides posadasii CPC735_025690 I 0.734
CPUR_03868 Claviceps purpurea CPUR_03868 I 0.711
CSUB01_01029 Colletotrichum sublineola CSUB01_01029 I 0.711
CTHT_0028340 Chaetomium thermophilum CTHT_0028340 I 0.704
CTRG_00624 Candida tropicalis CTRG_00624 I 0.679
DEHA2G10868g Debaryomyces hansenii DEHA2G10868g I 0.695
DOTSEDRAFT_132769 Dothistroma septosporum DOTSEDRAFT_132769 I 0.713
DRE_06212 Drechslerella stenobrocha DRE_06212 I 0.704
ENSCING00000022532 Ciona intestinalis ENSCING00000022532 I 0.651
EPUS_04947 Endocarpon pusillum EPUS_04947 I 0.759
EURHEDRAFT_516724 Aspergillus ruber EURHEDRAFT_516724 I 0.733
EV44_g5273 Erysiphe necator EV44_g5273 I 0.709
F503_07504 Ophiostoma piceae uamh F503_07504 I 0.709
FFUJ_02499 Fusarium fujikuroi FFUJ_02499 I 0.708
FGRRES_07420 Fusarium graminearum FGRRES_07420 I 0.704
FOXG_01471 Fusarium oxysporum FOXG_01471 I 0.708
FPSE_09383 Fusarium pseudograminearum FPSE_09383 I 0.688
FVEG_07837 Fusarium verticillioides FVEG_07837 I 0.708
G210_0560 Candida maltosa G210_0560 I 0.678
G647_04815 Cladophialophora carrionii G647_04815 I 0.758
GGTG_07952 Gaeumannomyces graminis GGTG_07952 I 0.711
GLRG_03233 Colletotrichum graminicola GLRG_03233 I 0.709
GMDG_00789 Pseudogymnoascus destructans GMDG_00789 I 0.708
GNLVRS01_PISO0E08012g Millerozyma farinosa GNLVRS01_PISO0E08012g I 0.691
GNLVRS01_PISO0F09355g Millerozyma farinosa GNLVRS01_PISO0F09355g I 0.691
GSTUM_00005211001 Tuber melanosporum GSTUM_00005211001 I 0.671
H072_327 Dactylellina haptotyla H072_327 I 0.705
H101_06747 Trichophyton interdigitale H101_06747 I 0.736
H102_04304 Trichophyton rubrum H102_04304 I 0.736
H105_04329 Trichophyton soudanense H105_04329 I 0.736
HCBG_05483 Histoplasma capsulatum HCBG_05483 I 0.730
HelroG70386 Helobdella robusta HelroG70386 I 0.650
HelroG82191 Helobdella robusta HelroG82191 I 0.652
HMPREF1120_04684 Exophiala dermatitidis HMPREF1120_04684 I 0.757
HMPREF1624_04412 Sporothrix schenckii HMPREF1624_04412 I 0.711
HPODL_00388 Ogataea parapolymorpha HPODL_00388 I 0.662
KAFR_0H03130 Kazachstania africana KAFR_0H03130 I 0.663
KAFR_0I02180 Kazachstania africana KAFR_0I02180 I 0.673
KLTH0H12144g Lachancea thermotolerans KLTH0H12144g I 0.680
KNAG_0I01300 Kazachstania naganishii KNAG_0I01300 I 0.676
Kpol_457p14 Vanderwaltozyma polyspora Kpol_457p14 I 0.673
KUCA_T00003838001 Kuraishia capsulata KUCA_T00003838001 I 0.661
LALA0_S03e09428g Lachancea lanzarotensis LALA0_S03e09428g I 0.685
LELG_03203 Lodderomyces elongisporus LELG_03203 I 0.680
LEMA_P019700.1 Leptosphaeria maculans LEMA_P019700.1 I 0.716
M437DRAFT_81253 Aureobasidium melanogenum M437DRAFT_81253 I 0.719
M438DRAFT_393589 Aureobasidium pullulans M438DRAFT_393589 I 0.719
MAC_02434 Metarhizium acridum MAC_02434 I 0.712
MAJ_05697 Metarhizium majus MAJ_05697 I 0.711
MAM_06665 Metarhizium album MAM_06665 I 0.712
MANI_023048 Metarhizium anisopliae MANI_023048 I 0.711
MAPG_07750 Magnaporthe poae MAPG_07750 I 0.711
MBM_03129 Marssonina brunnea MBM_03129 I 0.708
MBR_03889 Metarhizium brunneum MBR_03889 I 0.710
MCYG_06867 Arthroderma otae MCYG_06867 I 0.736
MGG_04000 Magnaporthe oryzae MGG_04000 I 0.705
MGU_07283 Metarhizium guizhouense MGU_07283 I 0.711
MGYG_03742 Microsporum gypseum MGYG_03742 I 0.736
MPH_13091 Macrophomina phaseolina MPH_13091 I 0.722
MYCFIDRAFT_10959 Pseudocercospora fijiensis MYCFIDRAFT_10959 I 0.714
Mycgr3G110369 Zymoseptoria tritici Mycgr3G110369 I 0.715
MYCTH_2301302 Myceliophthora thermophila MYCTH_2301302 I 0.701
NCAS_0C04880 Naumovozyma castellii NCAS_0C04880 I 0.676
NDAI_0G04240 Naumovozyma dairenensis NDAI_0G04240 I 0.677
NechaG49316 Fusarium solani NechaG49316 I 0.712
NEUTE1DRAFT_119738 Neurospora tetrasperma NEUTE1DRAFT_119738 I 0.706
OCS_02678 Ophiocordyceps sinensis OCS_02678 I 0.708
OIDMADRAFT_184073 Oidiodendron maius OIDMADRAFT_184073 I 0.688
PAAG_00480 Paracoccidioides sp lutzii PAAG_00480 I 0.732
PABG_06744 Paracoccidioides brasiliensis PABG_06744 I 0.733
PAS_chr2-2_0153 Komagataella pastoris PAS_chr2-2_0153 I 0.688
PCH_Pc20g01690 Penicillium rubens PCH_Pc20g01690 I 0.733
PDE_02161 Penicillium oxalicum PDE_02161 I 0.734
PDIP_47410 Penicillium digitatum PDIP_47410 I 0.733
PEX1_087840 Penicillium expansum PEX1_087840 I 0.733
PFICI_07890 Pestalotiopsis fici PFICI_07890 I 0.704
PGUG_04792 Meyerozyma guilliermondii PGUG_04792 I 0.663
PICST_78645 Scheffersomyces stipitis PICST_78645 I 0.689
PITC_028740 Penicillium italicum PITC_028740 I 0.733
PMAA_084960 Talaromyces marneffei PMAA_084960 I 0.732
PNEG_02893 Pneumocystis murina PNEG_02893 I 0.683
PODANS_2_5740 Podospora anserina PODANS_2_5740 I 0.680
PTRG_01267 Pyrenophora triticirepentis PTRG_01267 I 0.711
PTT_09109 Pyrenophora teres PTT_09109 I 0.711
PV04_03763 Capronia semiimmersa PV04_03763 I 0.758
PV05_05335 Exophiala xenobiotica PV05_05335 I 0.757
PV06_00023 Exophiala oligosperma PV06_00023 I 0.757
PV07_06647 Cladophialophora immunda PV07_06647 I 0.757
PV08_04071 Exophiala spinifera PV08_04071 I 0.757
PV09_00065 Verruconis gallopava PV09_00065 I 0.715
PV10_05596 Exophiala mesophila PV10_05596 I 0.757
PV11_01295 Exophiala sideris PV11_01295 I 0.756
PVAR5_6603 Byssochlamys spectabilis PVAR5_6603 I 0.735
S40285_05794 Stachybotrys chlorohalonata S40285_05794 I 0.695
S40288_01173 Stachybotrys chartarum S40288_01173 I 0.695
SAPIO_CDS9685 Scedosporium apiospermum SAPIO_CDS9685 I 0.714
SBOR_6602 Sclerotinia borealis SBOR_6602 I 0.703
SEPMUDRAFT_46603 Sphaerulina musiva SEPMUDRAFT_46603 I 0.714
SETTUDRAFT_147537 Setosphaeria turcica SETTUDRAFT_147537 I 0.714
SJAG_04839 Schizosaccharomyces japonicus SJAG_04839 I 0.682
SMAC_06634 Sordaria macrospora SMAC_06634 I 0.687
SNOG_15366 Phaeosphaeria nodorum SNOG_15366 I 0.718
SOCG_01623 Schizosaccharomyces octosporus SOCG_01623 I 0.676
sak1 Schizosaccharomyces pombe SPAC3G9.14 I 0.682
SPAPADRAFT_70246 Spathaspora passalidarum SPAPADRAFT_70246 I 0.687
SPBR_05608 Sporothrix brasiliensis SPBR_05608 I 0.711
SPOG_03909 Schizosaccharomyces cryophilus SPOG_03909 I 0.675
SS1G_00575 Sclerotinia sclerotiorum SS1G_00575 I 0.703
TBLA_0C01490 Tetrapisispora blattae TBLA_0C01490 I 0.677
TDEL_0B05980 Torulaspora delbrueckii TDEL_0B05980 I 0.681
TEQG_02965 Trichophyton equinum TEQG_02965 I 0.736
TESG_00180 Trichophyton tonsurans TESG_00180 I 0.736
THITE_2107553 Thielavia terrestris THITE_2107553 I 0.706
TPHA_0B03750 Tetrapisispora phaffii TPHA_0B03750 I 0.680
TRIATDRAFT_83492 Trichoderma atroviride TRIATDRAFT_83492 I 0.712
TRIREDRAFT_69349 Trichoderma reesei TRIREDRAFT_69349 I 0.709
TRIVIDRAFT_34449 Trichoderma virens TRIVIDRAFT_34449 I 0.709
TRV_04907 Trichophyton verrucosum TRV_04907 I 0.736
TSTA_119980 Talaromyces stipitatus TSTA_119980 I 0.732
U727_0043066021 Penicillium solitum U727_0043066021 I 0.733
UCRPA7_1505 Togninia minima UCRPA7_1505 I 0.708
UREG_04378 Uncinocarpus reesii UREG_04378 I 0.734
UV8b_7132 Ustilaginoidea virens UV8b_7132 I 0.691
V499_05779 Pseudogymnoascus pannorum V499_05779 I 0.708
VDAG_01397 Verticillium dahliae VDAG_01397 I 0.710
VDBG_04171 Verticillium alfalfae VDBG_04171 I 0.710
VHEMI10038 Torrubiella hemipterigena VHEMI10038 I 0.712
W97_05844 Coniosporium apollinis W97_05844 I 0.708
X797_002751 Metarhizium robertsii X797_002751 I 0.711
YALI0_E13596g Yarrowia lipolytica YALI0_E13596g I 0.691
Z517_10332 Fonsecaea pedrosoi Z517_10332 I 0.757
Z518_01660 Rhinocladiella mackenziei Z518_01660 I 0.758
ZBAI_03427 Zygosaccharomyces bailii ZBAI_03427 I 0.676
ZBAI_08430 Zygosaccharomyces bailii ZBAI_08430 I 0.676
ZYRO0E04642g Zygosaccharomyces rouxii ZYRO0E04642g I 0.678
e_gw1.6.922.1 Nectria haematococca e_gw1.6.922.1 I 0.712
estExt_fgenesh1_pg.C_chr_80140 Mycosphaerella graminicola estExt_fgenesh1_pg.C_chr_80140 I 0.715
estExt_fgenesh2_pg.C_10713 Neurospora discreta estExt_fgenesh2_pg.C_10713 I 0.710
estExt_fgenesh2_pg.C_390014 Monosiga brevicollis estExt_fgenesh2_pg.C_390014 I 0.651
estExt_genewise1_worm.C_chr_6.10133 Pichia stipitis estExt_genewise1_worm.C_chr_6.10133 I 0.681
fgeneshMC_pg.6_#_740 Mucor circinelloides fgeneshMC_pg.6_#_740 I 0.652
gw1.15.255.1 Mycosphaerella fijiensis gw1.15.255.1 I 0.714
NCU06701 Neurospora crassa NCU06701 I 0.706
PredSwiss_ASS2010_3110.1 Pneumocystis carinii PredSwiss_ASS2010_3110.1 I 0.683
PredSwiss_CON653.4 Pneumocystis carinii PredSwiss_CON653.4 I 0.683
Scas_Contig488.2 Saccharomyces castellii Scas_Contig488.2 I 0.676
14959_Multiple Saccharomyces mikatae 14959_Multiple I 0.673
16177_Multiple Saccharomyces paradoxus 16177_Multiple I 0.673
AB07822.1 Alternaria brassicicola AB07822.1 I 0.714
fgenesh1_pg.00162_#_176 Aspergillus carbonarius fgenesh1_pg.00162_#_176 I 0.732
fgenesh1_pg.C_scaffold_1001176 Cryphonectria parasitica fgenesh1_pg.C_scaffold_1001176 I 0.708
KLTH0H12144g Kluyveromyces thermotolerans KLTH0H12144g I 0.680
Kwal_214 Kluyveromyces waltii Kwal_214 I 0.680
Pc20g01690 Penicillium chrysogenum Pc20g01690 I 0.733
PMAA_084960 Penicillium marneffei PMAA_084960 I 0.732
SAKL0D08734g Lachancea kluyveri SAKL0D08734g I 0.681
XP_002492053.1 Pichia pastoris XP_002492053.1 I 0.688
V565_046180 Rhizoctonia solani V565_046180 N 0.651
Z519_02210 Cladophialophora bantiana Z519_02210 N 0.693