JAAARDRAFT_166855 (Jaapia argillacea)
RFX

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02257 (RFX_DNA_binding) IPR003150 JAAARDRAFT_166855 T318651_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RFX1
M00066_2.00 		Saccharomyces cerevisiae
NSGTTGCYAN
NTRGCAACSN		 PBM
Badis et al.(2008)
RFX1_4537 		0.651 0.430
RFX1
M07494_2.00 		Saccharomyces cerevisiae
BGTTRCYA
TRGYAACV		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0365.1 		0.651 0.430
RFX1
M08600_2.00 		Saccharomyces cerevisiae
CGTYRBYAYRGYWACM
KGTWRCYRTRVYRACG		 Misc
DeBoer et al.(2011)
YLR176C_1478 		0.651 0.430
RFX1
M08601_2.00 		Saccharomyces cerevisiae
BGTTRCYA
TRGYAACV		 Misc
DeBoer et al.(2011)
YLR176C_496 		0.651 0.430
RFX1
M11251_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$RFX1_02 		0.651 0.430
For this family, TFs with SR scores > 0.650 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KDQ64519 RFX 218 296

Links

Other RFX family TFs
Other Jaapia argillacea TFs

106 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SP8 Homo sapiens ENSG00000164651 D 0.000
SP5 Homo sapiens ENSG00000204335 D 0.000
SP9 Homo sapiens ENSG00000217236 D 0.000
Sp5 Mus musculus ENSMUSG00000075304 D 0.000
Sp1 Drosophila melanogaster FBgn0020378 D 0.000
AAEL012404 Aedes aegypti AAEL012404 I 0.000
ACEP25215 Atta cephalotes ACEP25215 I 0.000
ACYPI008529 Acyrthosiphon pisum ACYPI008529 I 0.000
AGAP000673 Anopheles gambiae AGAP000673 I 0.000
BGIBMGA006942 Bombyx mori BGIBMGA006942 I 0.000
BGIBMGA006943 Bombyx mori BGIBMGA006943 I 0.000
CapteG224157 Capitella teleta CapteG224157 I 0.000
CapteG39149 Capitella teleta CapteG39149 I 0.000
CGI_10004781 Crassostrea gigas CGI_10004781 I 0.000
DAPPUDRAFT_106303 Daphnia pulex DAPPUDRAFT_106303 I 0.000
EFV52785 Trichinella spiralis EFV52785 I 0.000
SP6 Anolis carolinensis ENSACAG00000006831 I 0.000
SP5 Anolis carolinensis ENSACAG00000016843 I 0.000
ENSACAG00000028172 Anolis carolinensis ENSACAG00000028172 I 0.000
ENSAMEG00000010417 Ailuropoda melanoleuca ENSAMEG00000010417 I 0.000
ENSAMEG00000019912 Ailuropoda melanoleuca ENSAMEG00000019912 I 0.000
ENSAMXG00000004709 Astyanax mexicanus ENSAMXG00000004709 I 0.000
ENSAMXG00000011277 Astyanax mexicanus ENSAMXG00000011277 I 0.000
ENSAMXG00000013057 Astyanax mexicanus ENSAMXG00000013057 I 0.000
ENSAMXG00000015246 Astyanax mexicanus ENSAMXG00000015246 I 0.000
ENSAMXG00000020011 Astyanax mexicanus ENSAMXG00000020011 I 0.000
SP6 Bos taurus ENSBTAG00000001825 I 0.000
SP8 Bos taurus ENSBTAG00000002604 I 0.000
SP5 Bos taurus ENSBTAG00000003207 I 0.000
SP9 Bos taurus ENSBTAG00000014949 I 0.000
SP5 Canis familiaris ENSCAFG00000012550 I 0.000
SP6 Canis familiaris ENSCAFG00000016810 I 0.000
SP8 Callithrix jacchus ENSCJAG00000001245 I 0.000
SP5 Callithrix jacchus ENSCJAG00000006965 I 0.000
SP6 Callithrix jacchus ENSCJAG00000007740 I 0.000
SP6 Cavia porcellus ENSCPOG00000007638 I 0.000
ENSCPOG00000011747 Cavia porcellus ENSCPOG00000011747 I 0.000
SP8 Cavia porcellus ENSCPOG00000026910 I 0.000
ENSCSAG00000013600 Chlorocebus sabaeus ENSCSAG00000013600 I 0.000
ENSCSAG00000014648 Chlorocebus sabaeus ENSCSAG00000014648 I 0.000
ENSCSAG00000015012 Chlorocebus sabaeus ENSCSAG00000015012 I 0.000
ENSCSAG00000019041 Chlorocebus sabaeus ENSCSAG00000019041 I 0.000
sp8a Danio rerio ENSDARG00000011870 I 0.000
sp8b Danio rerio ENSDARG00000056666 I 0.000
sp5a Danio rerio ENSDARG00000076571 I 0.000
sp9 Danio rerio ENSDARG00000099374 I 0.000
SP9 Dasypus novemcinctus ENSDNOG00000019150 I 0.000
SP6 Dasypus novemcinctus ENSDNOG00000042665 I 0.000
ENSDORG00000012608 Dipodomys ordii ENSDORG00000012608 I 0.000
SP6 Equus caballus ENSECAG00000012853 I 0.000
SP8 Erinaceus europaeus ENSEEUG00000000621 I 0.000
SP6 Echinops telfairi ENSETEG00000017017 I 0.000
ENSFALG00000001963 Ficedula albicollis ENSFALG00000001963 I 0.000
SP6 Felis catus ENSFCAG00000009363 I 0.000
SP5 Felis catus ENSFCAG00000012078 I 0.000
SP6 Homo sapiens ENSG00000189120 I 0.000
SP9 Gasterosteus aculeatus ENSGACG00000004757 I 0.000
sp5a Gasterosteus aculeatus ENSGACG00000005058 I 0.000
SP8 Gasterosteus aculeatus ENSGACG00000006479 I 0.000
sp8b Gasterosteus aculeatus ENSGACG00000008062 I 0.000
ENSGALG00000027511 Gallus gallus ENSGALG00000027511 I 0.000
SP6 Gorilla gorilla ENSGGOG00000004544 I 0.000
SP9 Gorilla gorilla ENSGGOG00000007345 I 0.000
ENSGGOG00000027746 Gorilla gorilla ENSGGOG00000027746 I 0.000
ENSGMOG00000002497 Gadus morhua ENSGMOG00000002497 I 0.000
ENSGMOG00000004590 Gadus morhua ENSGMOG00000004590 I 0.000
ENSGMOG00000008078 Gadus morhua ENSGMOG00000008078 I 0.000
ENSGMOG00000017717 Gadus morhua ENSGMOG00000017717 I 0.000
ENSLACG00000001435 Latimeria chalumnae ENSLACG00000001435 I 0.000
ENSLACG00000005288 Latimeria chalumnae ENSLACG00000005288 I 0.000
SP5 Loxodonta africana ENSLAFG00000002720 I 0.000
SP6 Loxodonta africana ENSLAFG00000010701 I 0.000
ENSLOCG00000007391 Lepisosteus oculatus ENSLOCG00000007391 I 0.000
ENSLOCG00000007577 Lepisosteus oculatus ENSLOCG00000007577 I 0.000
ENSLOCG00000007856 Lepisosteus oculatus ENSLOCG00000007856 I 0.000
ENSLOCG00000011486 Lepisosteus oculatus ENSLOCG00000011486 I 0.000
ENSMEUG00000007329 Macropus eugenii ENSMEUG00000007329 I 0.000
ENSMEUG00000012808 Macropus eugenii ENSMEUG00000012808 I 0.000
ENSMICG00000004826 Microcebus murinus ENSMICG00000004826 I 0.000
SP5 Myotis lucifugus ENSMLUG00000028807 I 0.000
SP5 Macaca mulatta ENSMMUG00000002690 I 0.000
SP6 Macaca mulatta ENSMMUG00000003011 I 0.000
SP8 Macaca mulatta ENSMMUG00000003722 I 0.000
SP9 Macaca mulatta ENSMMUG00000023005 I 0.000
SP8 Monodelphis domestica ENSMODG00000001375 I 0.000
SP5 Monodelphis domestica ENSMODG00000008446 I 0.000
SP9 Monodelphis domestica ENSMODG00000009303 I 0.000
SP6 Monodelphis domestica ENSMODG00000012454 I 0.000
ENSMPUG00000000796 Mustela putorius furo ENSMPUG00000000796 I 0.000
ENSMPUG00000013919 Mustela putorius furo ENSMPUG00000013919 I 0.000
ENSMPUG00000020086 Mustela putorius furo ENSMPUG00000020086 I 0.000
Sp6 Mus musculus ENSMUSG00000038560 I 0.000
Sp8 Mus musculus ENSMUSG00000048562 I 0.000
Sp9 Mus musculus ENSMUSG00000068859 I 0.000
ENSNLEG00000002050 Nomascus leucogenys ENSNLEG00000002050 I 0.000
ENSNLEG00000005184 Nomascus leucogenys ENSNLEG00000005184 I 0.000
ENSNLEG00000016729 Nomascus leucogenys ENSNLEG00000016729 I 0.000
SP5 Ornithorhynchus anatinus ENSOANG00000008556 I 0.000
ENSOARG00000002449 Ovis aries ENSOARG00000002449 I 0.000
SP6 Oryctolagus cuniculus ENSOCUG00000023482 I 0.000
SP6 Otolemur garnettii ENSOGAG00000030282 I 0.000
SP9 Otolemur garnettii ENSOGAG00000034062 I 0.000
ENSONIG00000001262 Oreochromis niloticus ENSONIG00000001262 I 0.000
ENSONIG00000002896 Oreochromis niloticus ENSONIG00000002896 I 0.000
ENSONIG00000008657 Oreochromis niloticus ENSONIG00000008657 I 0.000
ENSONIG00000008768 Oreochromis niloticus ENSONIG00000008768 I 0.000
ENSONIG00000010871 Oreochromis niloticus ENSONIG00000010871 I 0.000
SP6 Ochotona princeps ENSOPRG00000004019 I 0.000
SP8 Oryzias latipes ENSORLG00000003978 I 0.000
sp8b Oryzias latipes ENSORLG00000007242 I 0.000
sp5a Oryzias latipes ENSORLG00000017252 I 0.000
SP9 Oryzias latipes ENSORLG00000017492 I 0.000
ENSPANG00000015015 Papio anubis ENSPANG00000015015 I 0.000
ENSPANG00000016221 Papio anubis ENSPANG00000016221 I 0.000
ENSPANG00000017158 Papio anubis ENSPANG00000017158 I 0.000
ENSPANG00000023061 Papio anubis ENSPANG00000023061 I 0.000
SP9 Procavia capensis ENSPCAG00000012721 I 0.000
SP5 Procavia capensis ENSPCAG00000017098 I 0.000
ENSPFOG00000001566 Poecilia formosa ENSPFOG00000001566 I 0.000
ENSPFOG00000007998 Poecilia formosa ENSPFOG00000007998 I 0.000
ENSPFOG00000011175 Poecilia formosa ENSPFOG00000011175 I 0.000
ENSPFOG00000013459 Poecilia formosa ENSPFOG00000013459 I 0.000
ENSPPYG00000008884 Pongo abelii ENSPPYG00000008884 I 0.000
ENSPPYG00000012923 Pongo abelii ENSPPYG00000012923 I 0.000
ENSPPYG00000017747 Pongo abelii ENSPPYG00000017747 I 0.000
SP6 Pan troglodytes ENSPTRG00000009340 I 0.000
SP8 Pan troglodytes ENSPTRG00000018968 I 0.000
SP5 Pan troglodytes ENSPTRG00000029149 I 0.000
SP6 Pteropus vampyrus ENSPVAG00000004254 I 0.000
SP8 Pteropus vampyrus ENSPVAG00000005109 I 0.000
SP5 Pteropus vampyrus ENSPVAG00000006625 I 0.000
Sp8 Rattus norvegicus ENSRNOG00000005943 I 0.000
Sp6 Rattus norvegicus ENSRNOG00000023551 I 0.000
Sp9 Rattus norvegicus ENSRNOG00000028187 I 0.000
Sp5 Rattus norvegicus ENSRNOG00000054086 I 0.000
ENSSHAG00000004124 Sarcophilus harrisii ENSSHAG00000004124 I 0.000
SP6 Sus scrofa ENSSSCG00000017522 I 0.000
ENSSSCG00000029407 Sus scrofa ENSSSCG00000029407 I 0.000
ENSSTOG00000001607 Ictidomys tridecemlineatus ENSSTOG00000001607 I 0.000
ENSSTOG00000008099 Ictidomys tridecemlineatus ENSSTOG00000008099 I 0.000
ENSSTOG00000028058 Ictidomys tridecemlineatus ENSSTOG00000028058 I 0.000
ENSTGUG00000002679 Taeniopygia guttata ENSTGUG00000002679 I 0.000
SP8 Tetraodon nigroviridis ENSTNIG00000002903 I 0.000
sp5a Tetraodon nigroviridis ENSTNIG00000016928 I 0.000
SP9 Tetraodon nigroviridis ENSTNIG00000016949 I 0.000
sp8b Tetraodon nigroviridis ENSTNIG00000018442 I 0.000
SP8 Takifugu rubripes ENSTRUG00000008153 I 0.000
sp8b Takifugu rubripes ENSTRUG00000015810 I 0.000
SP9 Takifugu rubripes ENSTRUG00000017609 I 0.000
sp5a Takifugu rubripes ENSTRUG00000017816 I 0.000
SP5 Tursiops truncatus ENSTTRG00000004531 I 0.000
SP6 Tursiops truncatus ENSTTRG00000012481 I 0.000
SP8 Tursiops truncatus ENSTTRG00000013387 I 0.000
ENSXMAG00000000590 Xiphophorus maculatus ENSXMAG00000000590 I 0.000
ENSXMAG00000004924 Xiphophorus maculatus ENSXMAG00000004924 I 0.000
ENSXMAG00000005380 Xiphophorus maculatus ENSXMAG00000005380 I 0.000
GA12282 Drosophila pseudoobscura FBgn0072328 I 0.000
GF22533 Drosophila ananassae FBgn0099527 I 0.000
GG18323 Drosophila erecta FBgn0110539 I 0.000
GH11802 Drosophila grimshawi FBgn0119282 I 0.000
GI15983 Drosophila mojavensis FBgn0138732 I 0.000
GL16372 Drosophila persimilis FBgn0153976 I 0.000
GM11386 Drosophila sechellia FBgn0166329 I 0.000
GK25356 Drosophila willistoni FBgn0227315 I 0.000
GE17808 Drosophila yakuba FBgn0235250 I 0.000
HelroG136424 Helobdella robusta HelroG136424 I 0.000
HMEL005340 Heliconius melpomene HMEL005340 I 0.000
ISCW023685 Ixodes scapularis ISCW023685 I 0.000
KGM_00011 Danaus plexippus KGM_00011 I 0.000
KGM_00012 Danaus plexippus KGM_00012 I 0.000
L798_09167 Zootermopsis nevadensis L798_09167 I 0.000
LotgiG58476 Lottia gigantea LotgiG58476 I 0.000
MCINX013792 Melitaea cinxia MCINX013792 I 0.000
MCINX013793 Melitaea cinxia MCINX013793 I 0.000
MESCA000017 Megaselia scalaris MESCA000017 I 0.000
NEMVEDRAFT_v1g101900 Nematostella vectensis NEMVEDRAFT_v1g101900 I 0.000
NV12527 Nasonia vitripennis NV12527 I 0.000
PHUM453610 Pediculus humanus PHUM453610 I 0.000
RPRC004788 Rhodnius prolixus RPRC004788 I 0.000
SINV13577 Solenopsis invicta SINV13577 I 0.000
SMAR004954 Strigamia maritima SMAR004954 I 0.000
Smp_066930 Schistosoma mansoni Smp_066930 I 0.000
TC011696 Tribolium castaneum TC011696 I 0.000
TC011697 Tribolium castaneum TC011697 I 0.000
tetur22g00570 Tetranychus urticae tetur22g00570 I 0.000
YQE_04342 Dendroctonus ponderosae YQE_04342 I 0.000
Afo_R006896 Aptenodytes forsteri Afo_R006896 I 0.000
Alligator_sinensis_CCG008293.1 Alligator sinensis Alligator_sinensis_CCG008293.1 I 0.000
Alligator_sinensis_CCG014455.1 Alligator sinensis Alligator_sinensis_CCG014455.1 I 0.000
Cmyd_10010806 Chelonia mydas Cmyd_10010806 I 0.000
Cmyd_10015831 Chelonia mydas Cmyd_10015831 I 0.000
ENSBTAP00000002386-D1 Bos grunniens ENSBTAP00000002386-D1 I 0.000
ENSBTAP00000004166-D1 Bos grunniens ENSBTAP00000004166-D1 I 0.000
ENSP00000340799 Macaca fascicularis ENSP00000340799 I 0.000
ENSP00000364430 Macaca fascicularis ENSP00000364430 I 0.000
Myotis_brandtii_Sp5_10034946 Myotis brandtii Myotis_brandtii_Sp5_10034946 I 0.000
Ogr12594 Ophisaurus gracilis Ogr12594 I 0.000
Pvit_05803 Pogona vitticeps Pvit_05803 I 0.000
Pvit_11839 Pogona vitticeps Pvit_11839 I 0.000
Pvit_13957 Pogona vitticeps Pvit_13957 I 0.000
estExt_fgenesh2_pg.C_1190037 Branchiostoma floridae estExt_fgenesh2_pg.C_1190037 I 0.000
estExt_fgenesh2_pg.C_1190044 Branchiostoma floridae estExt_fgenesh2_pg.C_1190044 I 0.000
estExt_fgenesh2_pg.C_1190051 Branchiostoma floridae estExt_fgenesh2_pg.C_1190051 I 0.000
estExt_fgenesh2_pg.C_1190055 Branchiostoma floridae estExt_fgenesh2_pg.C_1190055 I 0.000
Ocbimv22023102m.g Octopus bimaculoides Ocbimv22023102m.g I 0.000
Ocbimv22028516m.g Octopus bimaculoides Ocbimv22028516m.g I 0.000
Sakowv30026942m.g Saccoglossus kowalevskii Sakowv30026942m.g I 0.000
CLEC009335 Cimex lectularius CLEC009335 I 0.000
HHAL010843-PA Halyomorpha halys HHAL010843-PA I 0.000
LCUP010370 Lucilia cuprina LCUP010370 I 0.000
LDEC008343 Leptinotarsa decemlineata LDEC008343 I 0.000
Sjc_0080330 Schistosoma japonicum Sjc_0080330 I 0.000
sp8.L Xenopus laevis XB-GENE-1216193 I 0.000
sp9 Xenopus tropicalis XB-GENE-5931012 I 0.000
XP_002933331 Xenopus tropicalis XP_002933331 I 0.000
XP_002933332 Xenopus tropicalis XP_002933332 I 0.000
XP_002933333 Xenopus tropicalis XP_002933333 I 0.000
XP_002938068 Xenopus tropicalis XP_002938068 I 0.000
AARA010384 Anopheles arabiensis AARA010384 I 0.000
ACUA022925 Anopheles culicifacies ACUA022925 I 0.000
AEPI000655 Anopheles epiroticus AEPI000655 I 0.000
AFAF010157 Anopheles farauti AFAF010157 I 0.000
AFUN011444 Anopheles funestus AFUN011444 I 0.000
AMEC017534 Anopheles melas AMEC017534 I 0.000
AMEM002678 Anopheles merus AMEM002678 I 0.000
AMIN002038 Anopheles minimus AMIN002038 I 0.000
ASTEI01151 Anopheles stephensi ASTEI01151 I 0.000
LLOJ007007 Lutzomyia longipalpis LLOJ007007 I 0.000
PPAI004544 Phlebotomus papatasi PPAI004544 I 0.000
A_02037 Schistosoma haematobium A_02037 I 0.000
csin109639 Clonorchis sinensis csin109639 I 0.000
D915_04632 Fasciola hepatica D915_04632 I 0.000
D917_06327 Trichinella nativa D917_06327 I 0.000
D918_01017 Trichuris suis D918_01017 I 0.000
ECPE_0000838601 Echinostoma caproni ECPE_0000838601 I 0.000
nRc.2.0.1.g47400 Romanomermis culicivorax nRc.2.0.1.g47400 I 0.000
PXEA_0001679901 Protopolystoma xenopodis PXEA_0001679901 I 0.000
SMRZ_0001697001 Schistosoma margrebowiei SMRZ_0001697001 I 0.000
SMTD_0000672001 Schistosoma mattheei SMTD_0000672001 I 0.000
SROB_0001082301 Schistosoma rodhaini SROB_0001082301 I 0.000
SSLN_0000264201 Schistocephalus solidus SSLN_0000264201 I 0.000
T265_02933 Opisthorchis viverrini T265_02933 I 0.000
TMUE_s0106000200 Trichuris muris TMUE_s0106000200 I 0.000
TRE_0000354701 Trichobilharzia regenti TRE_0000354701 I 0.000
TTRE_0000693001 Trichuris trichiura TTRE_0000693001 I 0.000
SP6 Danio rerio ENSDARG00000099880 N 0.000
zgc:77358 Gasterosteus aculeatus ENSGACG00000018154 N 0.000
ENSGMOG00000020473 Gadus morhua ENSGMOG00000020473 N 0.000
ENSLOCG00000013714 Lepisosteus oculatus ENSLOCG00000013714 N 0.000
ENSONIG00000003253 Oreochromis niloticus ENSONIG00000003253 N 0.000
ENSORLG00000018574 Oryzias latipes ENSORLG00000018574 N 0.000
ENSPFOG00000020694 Poecilia formosa ENSPFOG00000020694 N 0.000
zgc:77358 Tetraodon nigroviridis ENSTNIG00000014142 N 0.000
ENSTRUG00000004645 Takifugu rubripes ENSTRUG00000004645 N 0.000
ENSXMAG00000018112 Xiphophorus maculatus ENSXMAG00000018112 N 0.000
SNAPOd2T00003145001 Oikopleura dioica SNAPOd2T00003145001 N 0.000