e_gw1.6.922.1 (Nectria haematococca)
RFX

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02257 (RFX_DNA_binding) IPR003150 e_gw1.6.922.1 T319027_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RFX1
M00066_2.00 		Saccharomyces cerevisiae
NSGTTGCYAN
NTRGCAACSN		 PBM
Badis et al.(2008)
RFX1_4537 		0.671 0.500
RFX1
M07494_2.00 		Saccharomyces cerevisiae
BGTTRCYA
TRGYAACV		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0365.1 		0.671 0.500
RFX1
M08600_2.00 		Saccharomyces cerevisiae
CGTYRBYAYRGYWACM
KGTWRCYRTRVYRACG		 Misc
DeBoer et al.(2011)
YLR176C_1478 		0.671 0.500
RFX1
M08601_2.00 		Saccharomyces cerevisiae
BGTTRCYA
TRGYAACV		 Misc
DeBoer et al.(2011)
YLR176C_496 		0.671 0.500
RFX1
M11251_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$RFX1_02 		0.671 0.500
daf-19
M00709_2.00 		Caenorhabditis elegans
SGTTRCTADG
CHTAGYAACS		 PBM
Narasimhan et al.(2015)
pTH10021 		0.656 0.462
For this family, TFs with SR scores > 0.650 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
e_gw1.6.922.1 RFX 155 232

Links

Other RFX family TFs
Other Nectria haematococca TFs

230 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
daf-19 Caenorhabditis elegans WBGene00000914 D 0.656
RFX1 Saccharomyces cerevisiae YLR176C D 0.671
AMAG_10999 Allomyces macrogynus AMAG_10999 I 0.652
AMAG_11601 Allomyces macrogynus AMAG_11601 I 0.652
CAOG_00356 Capsaspora owczarzaki CAOG_00356 I 0.671
CIMG_05985 Coccidioides immitis CIMG_05985 I 0.724
CLUG_05348 Candida lusitaniae CLUG_05348 I 0.676
CPAG_04140 Candida parapsilosis CPAG_04140 I 0.671
MCYG_06867 Microsporum canis MCYG_06867 I 0.724
PGUG_04792 Candida guilliermondii PGUG_04792 I 0.669
SNOG_15366 Stagonospora nodorum SNOG_15366 I 0.733
VDBG_04171 Verticillium albo atrum VDBG_04171 I 0.770
A1O1_08600 Capronia coronata A1O1_08600 I 0.712
A1O3_08026 Capronia epimyces A1O3_08026 I 0.713
A1O5_04383 Cladophialophora psammophila A1O5_04383 I 0.712
A1O7_03561 Cladophialophora yegresii A1O7_03561 I 0.713
A1O9_03272 Exophiala aquamarina A1O9_03272 I 0.713
AACERI_AaceriAAL010W Saccharomycetaceae sp ashbya aceri AACERI_AaceriAAL010W I 0.676
ACRE_029400 Acremonium chrysogenum ACRE_029400 I 0.720
ACYPI002124 Acyrthosiphon pisum ACYPI002124 I 0.663
ADAC010162 Anopheles darlingi ADAC010162 I 0.650
AGOS_AAL010W Ashbya gossypii AGOS_AAL010W I 0.676
AOL_s00215g602 Arthrobotrys oligospora AOL_s00215g602 I 0.701
Aqu1.223787 Amphimedon queenslandica Aqu1.223787 I 0.651
ARB_07111 Arthroderma benhamiae ARB_07111 I 0.724
AUEXF2481DRAFT_78728 Aureobasidium subglaciale AUEXF2481DRAFT_78728 I 0.730
BAUCODRAFT_23427 Baudoinia compniacensis BAUCODRAFT_23427 I 0.725
BBA_07182 Beauveria bassiana BBA_07182 I 0.764
Bcin03g02360 Botrytis cinerea Bcin03g02360 I 0.755
BDDG_02784 Blastomyces dermatitidis BDDG_02784 I 0.717
BGHDH14_bgh05888 Blumeria graminis BGHDH14_bgh05888 I 0.743
BN7_2967 Wickerhamomyces ciferrii BN7_2967 I 0.682
ACLA_009440 Aspergillus clavatus CADACLAG00001004 I 0.726
CADAFLAG00010851 Aspergillus flavus CADAFLAG00010851 I 0.726
AFUA_5G06120 Aspergillus fumigatus CADAFUAG00006202 I 0.726
CADANGAG00013568 Aspergillus niger CADANGAG00013568 I 0.726
ANIA_02296 Aspergillus nidulans CADANIAG00008989 I 0.725
CADAORAG00004061 Aspergillus oryzae CADAORAG00004061 I 0.726
ATEG_09416 Aspergillus terreus CADATEAG00008983 I 0.726
NFIA_036980 Neosartorya fischeri CADNFIAG00003299 I 0.726
CAGL0B04895g Candida glabrata CAGL0B04895g I 0.670
CAGL0H03751g Candida glabrata CAGL0H03751g I 0.660
CaO19.11346 Candida albicans CaO19.11346 I 0.672
CaO19.3865 Candida albicans CaO19.3865 I 0.672
CapteG168129 Capitella teleta CapteG168129 I 0.651
CCM_03895 Cordyceps militaris CCM_03895 I 0.766
CD36_31600 Candida dubliniensis CD36_31600 I 0.672
CFIO01_07583 Colletotrichum fioriniae CFIO01_07583 I 0.769
CGGC5_15149 Colletotrichum gloeosporioides CGGC5_15149 I 0.772
CH063_09103 Colletotrichum higginsianum CH063_09103 I 0.769
CLUG_05348 Clavispora lusitaniae CLUG_05348 I 0.676
CMQ_5960 Grosmannia clavigera CMQ_5960 I 0.769
Cob_11986 Colletotrichum orbiculare Cob_11986 I 0.772
COCC4DRAFT_162970 Bipolaris maydis COCC4DRAFT_162970 I 0.731
COCCADRAFT_29061 Bipolaris zeicola COCCADRAFT_29061 I 0.731
COCMIDRAFT_23254 Bipolaris oryzae COCMIDRAFT_23254 I 0.731
COCSADRAFT_34318 Bipolaris sorokiniana COCSADRAFT_34318 I 0.731
COCVIDRAFT_40879 Bipolaris victoriae COCVIDRAFT_40879 I 0.731
CORT_0D05100 Candida orthopsilosis CORT_0D05100 I 0.671
CPC735_025690 Coccidioides posadasii CPC735_025690 I 0.724
CPUR_03868 Claviceps purpurea CPUR_03868 I 0.769
CSUB01_01029 Colletotrichum sublineola CSUB01_01029 I 0.769
CTHT_0028340 Chaetomium thermophilum CTHT_0028340 I 0.755
CTRG_00624 Candida tropicalis CTRG_00624 I 0.666
DEHA2G10868g Debaryomyces hansenii DEHA2G10868g I 0.687
DOTSEDRAFT_132769 Dothistroma septosporum DOTSEDRAFT_132769 I 0.726
DRE_06212 Drechslerella stenobrocha DRE_06212 I 0.700
EPUS_04947 Endocarpon pusillum EPUS_04947 I 0.712
EURHEDRAFT_516724 Aspergillus ruber EURHEDRAFT_516724 I 0.726
EV44_g5273 Erysiphe necator EV44_g5273 I 0.760
F503_07504 Ophiostoma piceae uamh F503_07504 I 0.767
FFUJ_02499 Fusarium fujikuroi FFUJ_02499 I 0.758
FGRRES_07420 Fusarium graminearum FGRRES_07420 I 0.756
FOXG_01471 Fusarium oxysporum FOXG_01471 I 0.758
FPSE_09383 Fusarium pseudograminearum FPSE_09383 I 0.741
FVEG_07837 Fusarium verticillioides FVEG_07837 I 0.758
G210_0560 Candida maltosa G210_0560 I 0.665
G647_04815 Cladophialophora carrionii G647_04815 I 0.712
GGTG_07952 Gaeumannomyces graminis GGTG_07952 I 0.764
GLRG_03233 Colletotrichum graminicola GLRG_03233 I 0.770
GMDG_00789 Pseudogymnoascus destructans GMDG_00789 I 0.759
GNLVRS01_PISO0E08012g Millerozyma farinosa GNLVRS01_PISO0E08012g I 0.686
GNLVRS01_PISO0F09355g Millerozyma farinosa GNLVRS01_PISO0F09355g I 0.686
GSTUM_00005211001 Tuber melanosporum GSTUM_00005211001 I 0.672
H072_327 Dactylellina haptotyla H072_327 I 0.701
H101_06747 Trichophyton interdigitale H101_06747 I 0.724
H102_04304 Trichophyton rubrum H102_04304 I 0.724
H105_04329 Trichophyton soudanense H105_04329 I 0.722
HCBG_05483 Histoplasma capsulatum HCBG_05483 I 0.722
HelroG70386 Helobdella robusta HelroG70386 I 0.654
HMPREF1120_04684 Exophiala dermatitidis HMPREF1120_04684 I 0.712
HMPREF1541_04667 Cyphellophora europaea HMPREF1541_04667 I 0.712
HMPREF1624_04412 Sporothrix schenckii HMPREF1624_04412 I 0.761
HPODL_00388 Ogataea parapolymorpha HPODL_00388 I 0.656
KAFR_0H03130 Kazachstania africana KAFR_0H03130 I 0.656
KAFR_0I02180 Kazachstania africana KAFR_0I02180 I 0.672
KGM_13721 Danaus plexippus KGM_13721 I 0.655
KLTH0H12144g Lachancea thermotolerans KLTH0H12144g I 0.678
KNAG_0I01300 Kazachstania naganishii KNAG_0I01300 I 0.675
Kpol_457p14 Vanderwaltozyma polyspora Kpol_457p14 I 0.667
L798_03671 Zootermopsis nevadensis L798_03671 I 0.651
LALA0_S03e09428g Lachancea lanzarotensis LALA0_S03e09428g I 0.684
LELG_03203 Lodderomyces elongisporus LELG_03203 I 0.666
LEMA_P019700.1 Leptosphaeria maculans LEMA_P019700.1 I 0.733
M437DRAFT_81253 Aureobasidium melanogenum M437DRAFT_81253 I 0.730
M438DRAFT_393589 Aureobasidium pullulans M438DRAFT_393589 I 0.730
MAC_02434 Metarhizium acridum MAC_02434 I 0.771
MAJ_05697 Metarhizium majus MAJ_05697 I 0.769
MAM_06665 Metarhizium album MAM_06665 I 0.771
MANI_023048 Metarhizium anisopliae MANI_023048 I 0.769
MAPG_07750 Magnaporthe poae MAPG_07750 I 0.764
MBM_03129 Marssonina brunnea MBM_03129 I 0.759
MBR_03889 Metarhizium brunneum MBR_03889 I 0.768
MCYG_06867 Arthroderma otae MCYG_06867 I 0.724
MGG_04000 Magnaporthe oryzae MGG_04000 I 0.746
MGU_07283 Metarhizium guizhouense MGU_07283 I 0.769
MGYG_03742 Microsporum gypseum MGYG_03742 I 0.724
MPH_13091 Macrophomina phaseolina MPH_13091 I 0.726
MYCFIDRAFT_10959 Pseudocercospora fijiensis MYCFIDRAFT_10959 I 0.726
Mycgr3G110369 Zymoseptoria tritici Mycgr3G110369 I 0.728
MYCTH_2301302 Myceliophthora thermophila MYCTH_2301302 I 0.753
NCAS_0C04880 Naumovozyma castellii NCAS_0C04880 I 0.675
NDAI_0G04240 Naumovozyma dairenensis NDAI_0G04240 I 0.675
NechaG49316 Fusarium solani NechaG49316 I 0.776
NEMVEDRAFT_v1g96414 Nematostella vectensis NEMVEDRAFT_v1g96414 I 0.659
NEUTE1DRAFT_119738 Neurospora tetrasperma NEUTE1DRAFT_119738 I 0.761
OCS_02678 Ophiocordyceps sinensis OCS_02678 I 0.767
OIDMADRAFT_184073 Oidiodendron maius OIDMADRAFT_184073 I 0.739
PAAG_00480 Paracoccidioides sp lutzii PAAG_00480 I 0.722
PABG_06744 Paracoccidioides brasiliensis PABG_06744 I 0.720
PAS_chr2-2_0153 Komagataella pastoris PAS_chr2-2_0153 I 0.680
PCH_Pc20g01690 Penicillium rubens PCH_Pc20g01690 I 0.723
PDE_02161 Penicillium oxalicum PDE_02161 I 0.724
PDIP_47410 Penicillium digitatum PDIP_47410 I 0.723
PEX1_087840 Penicillium expansum PEX1_087840 I 0.723
PFICI_07890 Pestalotiopsis fici PFICI_07890 I 0.756
PGUG_04792 Meyerozyma guilliermondii PGUG_04792 I 0.669
PHUM236330 Pediculus humanus PHUM236330 I 0.651
PICST_78645 Scheffersomyces stipitis PICST_78645 I 0.686
PITC_028740 Penicillium italicum PITC_028740 I 0.723
PMAA_084960 Talaromyces marneffei PMAA_084960 I 0.720
PNEG_02893 Pneumocystis murina PNEG_02893 I 0.678
PODANS_2_5740 Podospora anserina PODANS_2_5740 I 0.708
PTRG_01267 Pyrenophora triticirepentis PTRG_01267 I 0.727
PTT_09109 Pyrenophora teres PTT_09109 I 0.728
PV04_03763 Capronia semiimmersa PV04_03763 I 0.713
PV05_05335 Exophiala xenobiotica PV05_05335 I 0.712
PV06_00023 Exophiala oligosperma PV06_00023 I 0.712
PV07_06647 Cladophialophora immunda PV07_06647 I 0.713
PV08_04071 Exophiala spinifera PV08_04071 I 0.712
PV09_00065 Verruconis gallopava PV09_00065 I 0.722
PV10_05596 Exophiala mesophila PV10_05596 I 0.712
PV11_01295 Exophiala sideris PV11_01295 I 0.712
PVAR5_6603 Byssochlamys spectabilis PVAR5_6603 I 0.719
S40285_05794 Stachybotrys chlorohalonata S40285_05794 I 0.750
S40288_01173 Stachybotrys chartarum S40288_01173 I 0.750
SAPIO_CDS9685 Scedosporium apiospermum SAPIO_CDS9685 I 0.767
SBOR_6602 Sclerotinia borealis SBOR_6602 I 0.752
SEPMUDRAFT_46603 Sphaerulina musiva SEPMUDRAFT_46603 I 0.726
SETTUDRAFT_147537 Setosphaeria turcica SETTUDRAFT_147537 I 0.731
SJAG_04839 Schizosaccharomyces japonicus SJAG_04839 I 0.676
SMAC_06634 Sordaria macrospora SMAC_06634 I 0.742
SNOG_15366 Phaeosphaeria nodorum SNOG_15366 I 0.733
SOCG_01623 Schizosaccharomyces octosporus SOCG_01623 I 0.672
sak1 Schizosaccharomyces pombe SPAC3G9.14 I 0.681
SPAPADRAFT_70246 Spathaspora passalidarum SPAPADRAFT_70246 I 0.681
SPBR_05608 Sporothrix brasiliensis SPBR_05608 I 0.761
SPOG_03909 Schizosaccharomyces cryophilus SPOG_03909 I 0.671
SS1G_00575 Sclerotinia sclerotiorum SS1G_00575 I 0.751
TBLA_0C01490 Tetrapisispora blattae TBLA_0C01490 I 0.676
TDEL_0B05980 Torulaspora delbrueckii TDEL_0B05980 I 0.672
TEQG_02965 Trichophyton equinum TEQG_02965 I 0.724
TESG_00180 Trichophyton tonsurans TESG_00180 I 0.724
THITE_2107553 Thielavia terrestris THITE_2107553 I 0.747
TPHA_0B03750 Tetrapisispora phaffii TPHA_0B03750 I 0.671
TRIATDRAFT_83492 Trichoderma atroviride TRIATDRAFT_83492 I 0.771
TRIREDRAFT_69349 Trichoderma reesei TRIREDRAFT_69349 I 0.768
TRIVIDRAFT_34449 Trichoderma virens TRIVIDRAFT_34449 I 0.768
TRV_04907 Trichophyton verrucosum TRV_04907 I 0.724
TSTA_119980 Talaromyces stipitatus TSTA_119980 I 0.720
U727_0043066021 Penicillium solitum U727_0043066021 I 0.723
UCRPA7_1505 Togninia minima UCRPA7_1505 I 0.771
UREG_04378 Uncinocarpus reesii UREG_04378 I 0.724
UV8b_7132 Ustilaginoidea virens UV8b_7132 I 0.722
V499_05779 Pseudogymnoascus pannorum V499_05779 I 0.759
VDAG_01397 Verticillium dahliae VDAG_01397 I 0.770
VDBG_04171 Verticillium alfalfae VDBG_04171 I 0.770
VHEMI10038 Torrubiella hemipterigena VHEMI10038 I 0.771
W97_05844 Coniosporium apollinis W97_05844 I 0.731
X797_002751 Metarhizium robertsii X797_002751 I 0.769
YALI0_E13596g Yarrowia lipolytica YALI0_E13596g I 0.693
Z517_10332 Fonsecaea pedrosoi Z517_10332 I 0.712
Z518_01660 Rhinocladiella mackenziei Z518_01660 I 0.713
ZBAI_03427 Zygosaccharomyces bailii ZBAI_03427 I 0.675
ZBAI_08430 Zygosaccharomyces bailii ZBAI_08430 I 0.675
ZYRO0E04642g Zygosaccharomyces rouxii ZYRO0E04642g I 0.673
Aan_R008768 Calypte anna Aan_R008768 I 0.657
Cmyd_10003770 Chelonia mydas Cmyd_10003770 I 0.651
estExt_fgenesh1_pg.C_chr_80140 Mycosphaerella graminicola estExt_fgenesh1_pg.C_chr_80140 I 0.728
estExt_fgenesh2_pg.C_10713 Neurospora discreta estExt_fgenesh2_pg.C_10713 I 0.765
estExt_fgenesh2_pg.C_4710022 Branchiostoma floridae estExt_fgenesh2_pg.C_4710022 I 0.652
estExt_genewise1_worm.C_chr_6.10133 Pichia stipitis estExt_genewise1_worm.C_chr_6.10133 I 0.681
fgeneshMC_pg.6_#_740 Mucor circinelloides fgeneshMC_pg.6_#_740 I 0.652
gw1.15.255.1 Mycosphaerella fijiensis gw1.15.255.1 I 0.726
NCU06701 Neurospora crassa NCU06701 I 0.761
PredSwiss_ASS2010_3110.1 Pneumocystis carinii PredSwiss_ASS2010_3110.1 I 0.678
PredSwiss_CON653.4 Pneumocystis carinii PredSwiss_CON653.4 I 0.678
Scas_Contig488.2 Saccharomyces castellii Scas_Contig488.2 I 0.675
SMU15029830 Schmidtea mediterranea SMU15029830 I 0.652
14959_Multiple Saccharomyces mikatae 14959_Multiple I 0.671
16177_Multiple Saccharomyces paradoxus 16177_Multiple I 0.671
AB07822.1 Alternaria brassicicola AB07822.1 I 0.730
fgenesh1_pg.00162_#_176 Aspergillus carbonarius fgenesh1_pg.00162_#_176 I 0.726
fgenesh1_pg.C_scaffold_1001176 Cryphonectria parasitica fgenesh1_pg.C_scaffold_1001176 I 0.741
KLTH0H12144g Kluyveromyces thermotolerans KLTH0H12144g I 0.678
Kwal_214 Kluyveromyces waltii Kwal_214 I 0.678
Pc20g01690 Penicillium chrysogenum Pc20g01690 I 0.723
PMAA_084960 Penicillium marneffei PMAA_084960 I 0.720
SAKL0D08734g Lachancea kluyveri SAKL0D08734g I 0.673
XP_002492053.1 Pichia pastoris XP_002492053.1 I 0.680
AALB009562 Anopheles albimanus AALB009562 I 0.650
LLOJ001292 Lutzomyia longipalpis LLOJ001292 I 0.651
PPAI005117 Phlebotomus papatasi PPAI005117 I 0.651
D918_02290 Trichuris suis D918_02290 I 0.651
DILT_0000443401 Diphyllobothrium latum DILT_0000443401 I 0.651
scaffold324-EXSNAP2012.23 Pristionchus exspectatus scaffold324-EXSNAP2012.23 I 0.657
PAS_chr3_0071 Komagataella pastoris PAS_chr3_0071 N 0.653
V565_046180 Rhizoctonia solani V565_046180 N 0.650
Z519_02210 Cladophialophora bantiana Z519_02210 N 0.670
XP_002492279.1 Pichia pastoris XP_002492279.1 N 0.653