ECPE_0001391801 (Echinostoma caproni)
RFX

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02257 (RFX_DNA_binding) IPR003150 ECPE_0001391801 T319186_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
ECPE_0001391801-mRNA-1 RFX 1 42

Links

Other RFX family TFs
Other Echinostoma caproni TFs

23 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo2g062840 Brassica oleracea Bo2g062840 I 0.000
Ca_11356 Cicer arietinum Ca_11356 I 0.000
VIT_01s0010g03710 Vitis vinifera VIT_01s0010g03710 I 0.000
29929.m004641 Ricinus communis 29929.m004641 I 0.000
mgf019346m Mimulus guttatus mgf019346m I 0.000
POPTR_0003s17120 Populus trichocarpa POPTR_0003s17120 I 0.000
POPTR_0001s13890 Populus trichocarpa POPTR_0001s13890 I 0.000
Aquca_018_00218 Aquilegia coerulea Aquca_018_00218 I 0.000
PGSC0003DMG400026736 Solanum tuberosum PGSC0003DMG400026736 I 0.000
evm.TU.supercontig_43.66 Carica papaya evm.TU.supercontig_43.66 I 0.000
SapurV1A.0056s0240 Salix purpurea SapurV1A.0056s0240 I 0.000
SapurV1A.1271s0060 Salix purpurea SapurV1A.1271s0060 I 0.000
BRADI3G05510 Brachypodium distachyon BRADI3G05510 I 0.000
Bra038324 Brassica rapa Bra038324 I 0.000
LjSGA_032871.1 Lotus japonicus LjSGA_032871.1 N 0.000
SapurV1A.0001s2320 Salix purpurea SapurV1A.0001s2320 N 0.000
SPL2 Arabidopsis thaliana AT5G43270 N 0.000
Pm007020 Prunus mume Pm007020 N 0.000
LjSGA_017270.1 Lotus japonicus LjSGA_017270.1 N 0.000
cassava12059.valid.m1 Manihot esculenta cassava12059.valid.m1 N 0.000
cassava6540.valid.m1 Manihot esculenta cassava6540.valid.m1 N 0.000
mgf010397m Mimulus guttatus mgf010397m N 0.000
PK16953.1 Cannabis sativa PK16953.1 N 0.000
Thhalv10003215m.g Eutrema salsugineum Thhalv10003215m.g N 0.000
Bostr.10273s0456 Boechera stricta Bostr.10273s0456 N 0.000
Bostr.3148s0148 Boechera stricta Bostr.3148s0148 N 0.000
Cagra.8694s0002 Capsella grandiflora Cagra.8694s0002 N 0.000
Carubv10026434m.g Capsella rubella Carubv10026434m.g N 0.000
Ciclev10031391m.g Citrus clementina Ciclev10031391m.g N 0.000
Gorai.002G182700 Gossypium raimondii Gorai.002G182700 N 0.000
Lus10021614.g Linum usitatissimum Lus10021614.g N 0.000
MDP0000155354 Malus domestica MDP0000155354 N 0.000
orange1.1g011640m.g Citrus sinensis orange1.1g011640m.g N 0.000
GSMUA_Achr5G22630_001 Musa acuminata GSMUA_Achr5G22630_001 N 0.000
Bo7g065290 Brassica oleracea Bo7g065290 N 0.000
Bo9g058970 Brassica oleracea Bo9g058970 N 0.000
Bra027478 Brassica rapa Bra027478 N 0.000
Bra033671 Brassica rapa Bra033671 N 0.000
GLYMA11G36980 Glycine max GLYMA11G36980 N 0.000
GLYMA18G00903 Glycine max GLYMA18G00903 N 0.000
GRMZM2G126827 Zea mays GRMZM2G126827 N 0.000
GRMZM2G156621 Zea mays GRMZM2G156621 N 0.000
GRMZM2G163813 Zea mays GRMZM2G163813 N 0.000
GSMUA_Achr10G02970_001 Musa acuminata GSMUA_Achr10G02970_001 N 0.000
GSMUA_Achr3G05360_001 Musa acuminata GSMUA_Achr3G05360_001 N 0.000
GSMUA_Achr5G21990_001 Musa acuminata GSMUA_Achr5G21990_001 N 0.000
SPL2 Vitis vinifera VIT_11s0065g00170 N 0.000
GSMUA_Achr8G23820_001 Musa acuminata GSMUA_Achr8G23820_001 N 0.000
GSMUA_Achr9G14160_001 Musa acuminata GSMUA_Achr9G14160_001 N 0.000
MLOC_62426 Hordeum vulgare MLOC_62426 N 0.000
MTR_3g085180 Medicago truncatula MTR_3g085180 N 0.000
PGSC0003DMG400034310 Solanum tuberosum PGSC0003DMG400034310 N 0.000
POPTR_0018s14680 Populus trichocarpa POPTR_0018s14680 N 0.000
PRUPE_ppa005013mg Prunus persica PRUPE_ppa005013mg N 0.000
Sb04g004940 Sorghum bicolor Sb04g004940 N 0.000
SPL2 Arabidopsis lyrata scaffold_800740.1 N 0.000
Solyc05g015510.2 Solanum lycopersicum Solyc05g015510.2 N 0.000
TCM_008772 Theobroma cacao TCM_008772 N 0.000