CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CBN16462
(
Caenorhabditis brenneri
)
Runt
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00853 (Runt)
IPR013524
CBN16462
T319310_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CBN16462
Runt
11
140
FMEQQPIPAKTLEKSSSPNILYSTLPKHWRSNKSFQEPFYVVLLTPVPDNTEVSIWAGNDEKPCEEVRNEKAKVHRQVAKFNDLRFVGRSGRGRKFHLTIVIHSSPMMVATVKNVIKVTVDGPRDARVPK
Links
Other
Runt
family TFs
Other
Caenorhabditis brenneri
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA030852
Oryza indica
BGIOSGA030852
N
OB09G18440
Oryza brachyantha
OB09G18440
N
OBART09G11970
Oryza barthii
OBART09G11970
N
OGLUM09G12360
Oryza glumaepatula
OGLUM09G12360
N
OMERI09G09450
Oryza meridionalis
OMERI09G09450
N
ONIVA09G12330
Oryza nivara
ONIVA09G12330
N
ONIVA09G12350
Oryza nivara
ONIVA09G12350
N
OPUNC09G10480
Oryza punctata
OPUNC09G10480
N
ORGLA09G0090800
Oryza glaberrima
ORGLA09G0090800
N
ORUFI09G12830
Oryza rufipogon
ORUFI09G12830
N
OS09G0444100
Oryza sativa
OS09G0444100
N