VIT_17s0000g06250 (Vitis vinifera)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02042 (RWP-RK) IPR003035 VIT_17s0000g06250 T320897_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RKD2
M07249_2.00 		Arabidopsis thaliana
NHGWCBNTTCRDCTTCYHN
NDRGAAGHYGAANVGWCDN		 Dap-seq
OMalley et al.(2016)
RKD2_col_a 		0.816 0.816
RKD2
M07250_2.00 		Arabidopsis thaliana
GWCBBTTCRDMTTCC
GGAAKHYGAAVVGWC		 Dap-seq
OMalley et al.(2016)
RKD2_colamp_a 		0.816 0.816
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
VIT_17s0000g06250.t01 RWP-RK 85 133

Links

Other RWP-RK family TFs
Other Vitis vinifera TFs

77 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O3_02456 Capronia epimyces A1O3_02456 N
G647_00678 Cladophialophora carrionii G647_00678 N
HMPREF1120_06051 Exophiala dermatitidis HMPREF1120_06051 N
PV04_01405 Capronia semiimmersa PV04_01405 N
PV05_11753 Exophiala xenobiotica PV05_11753 N
PV06_03343 Exophiala oligosperma PV06_03343 N
PV07_09943 Cladophialophora immunda PV07_09943 N
PV11_06793 Exophiala sideris PV11_06793 N
Z518_04252 Rhinocladiella mackenziei Z518_04252 N
Z519_02823 Cladophialophora bantiana Z519_02823 N