30138.m004071 (Ricinus communis)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02042 (RWP-RK) IPR003035 30138.m004071 T320938_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RKD2
M07249_2.00 		Arabidopsis thaliana
NHGWCBNTTCRDCTTCYHN
NDRGAAGHYGAANVGWCDN		 Dap-seq
OMalley et al.(2016)
RKD2_col_a 		0.796 0.796
RKD2
M07250_2.00 		Arabidopsis thaliana
GWCBBTTCRDMTTCC
GGAAKHYGAAVVGWC		 Dap-seq
OMalley et al.(2016)
RKD2_colamp_a 		0.796 0.796
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
30138.m004071 RWP-RK 146 194

Links

Other RWP-RK family TFs
Other Ricinus communis TFs

82 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PCH_Pc23g00600 Penicillium rubens PCH_Pc23g00600 N
Pc23g00600 Penicillium chrysogenum Pc23g00600 N
Pc21g23810 Penicillium chrysogenum Pc21g23810 N
Pc21g12360 Penicillium chrysogenum Pc21g12360 N
fgenesh1_pm.00083_#_41 Aspergillus carbonarius fgenesh1_pm.00083_#_41 N
e_gw1.00866.217.1 Aspergillus carbonarius e_gw1.00866.217.1 N
gw1.3.1196.1 Mycosphaerella graminicola gw1.3.1196.1 N
U727_0043182001 Penicillium solitum U727_0043182001 N
TSTA_096880 Talaromyces stipitatus TSTA_096880 N
TSTA_019630 Talaromyces stipitatus TSTA_019630 N
SEPMUDRAFT_148614 Sphaerulina musiva SEPMUDRAFT_148614 N
PV09_04380 Verruconis gallopava PV09_04380 N
PFICI_01986 Pestalotiopsis fici PFICI_01986 N
PEX1_039490 Penicillium expansum PEX1_039490 N
PDE_04927 Penicillium oxalicum PDE_04927 N
BAUCODRAFT_36555 Baudoinia compniacensis BAUCODRAFT_36555 N
PCH_Pc21g23810 Penicillium rubens PCH_Pc21g23810 N
OIDMADRAFT_125761 Oidiodendron maius OIDMADRAFT_125761 N
Mycgr3G21552 Zymoseptoria tritici Mycgr3G21552 N
MYCFIDRAFT_203102 Pseudocercospora fijiensis MYCFIDRAFT_203102 N
DOTSEDRAFT_131743 Dothistroma septosporum DOTSEDRAFT_131743 N
NFIA_003050 Neosartorya fischeri CADNFIAG00000049 N
ANIA_05052 Aspergillus nidulans CADANIAG00005337 N
ANIA_00718 Aspergillus nidulans CADANIAG00001950 N
CADANGAG00011548 Aspergillus niger CADANGAG00011548 N
CADANGAG00005038 Aspergillus niger CADANGAG00005038 N
AFUA_3G12180 Aspergillus fumigatus CADAFUAG00005119 N
AFUA_3G01980 Aspergillus fumigatus CADAFUAG00000223 N
CADAFLAG00002407 Aspergillus flavus CADAFLAG00002407 N
ACLA_062510 Aspergillus clavatus CADACLAG00005983 N