Carubv10028317m.g (Capsella rubella)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02042 (RWP-RK) IPR003035 Carubv10028317m.g T321102_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10028317m RWP-RK 138 186

Links

Other RWP-RK family TFs
Other Capsella rubella TFs

34 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00057p00091350 Amborella trichopoda AMTR_s00057p00091350 I 0.757
TRIUR3_19503 Triticum urartu TRIUR3_19503 I 0.714
MDP0000261199 Malus domestica MDP0000261199 I 0.714
Gorai.008G193400 Gossypium raimondii Gorai.008G193400 I 0.714
TCM_014009 Theobroma cacao TCM_014009 I 0.714
Si020172m.g Setaria italica Si020172m.g I 0.730
MLOC_12609 Hordeum vulgare MLOC_12609 I 0.784
Pm019768 Prunus mume Pm019768 N 0.735
PDK_20s1788591g001 Phoenix dactylifera PDK_20s1788591g001 N 0.714
30024.m001687 Ricinus communis 30024.m001687 N 0.714
cassava34339.m1 Manihot esculenta cassava34339.m1 N 0.755
mgf025545m Mimulus guttatus mgf025545m N 0.755
Bostr.26833s0978 Boechera stricta Bostr.26833s0978 N 0.959
Cagra.0084s0050 Capsella grandiflora Cagra.0084s0050 N 1.000
evm.TU.supercontig_3.98 Carica papaya evm.TU.supercontig_3.98 N 0.714
Gorai.003G121600 Gossypium raimondii Gorai.003G121600 N 0.755
MDP0000141137 Malus domestica MDP0000141137 N 0.735
MDP0000819497 Malus domestica MDP0000819497 N 0.735
Thhalv10015321m.g Eutrema salsugineum Thhalv10015321m.g N 0.898
Ca_03992 Cicer arietinum Ca_03992 N 0.714
VIT_16s0098g01730 Vitis vinifera VIT_16s0098g01730 N 0.776
TCM_015430 Theobroma cacao TCM_015430 N 0.776
Solyc03g083040.1 Solanum lycopersicum Solyc03g083040.1 N 0.755
PRUPE_ppa015130mg Prunus persica PRUPE_ppa015130mg N 0.735
PGSC0003DMG400018531 Solanum tuberosum PGSC0003DMG400018531 N 0.755
GSMUA_AchrUn_randomG11290_001 Musa acuminata GSMUA_AchrUn_randomG11290_001 N 0.776
GSMUA_Achr4G08610_001 Musa acuminata GSMUA_Achr4G08610_001 N 0.755
GLYMA06G13540 Glycine max GLYMA06G13540 N 0.735
fgenesh1_pm.C_scaffold_8001005 Arabidopsis lyrata fgenesh1_pm.C_scaffold_8001005 N 0.959
Bra022622 Brassica rapa Bra022622 N 0.898
Bra003088 Brassica rapa Bra003088 N 0.878
Bo9g108730 Brassica oleracea Bo9g108730 N 0.857
Bo2g046220 Brassica oleracea Bo2g046220 N 0.898
RKD4 Arabidopsis thaliana AT5G53040 N 0.980