gene26015-v1.0-hybrid (Fragaria vesca)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02042 (RWP-RK) IPR003035 gene26015-v1.0-hybrid T321140_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RKD2
M07249_2.00 		Arabidopsis thaliana
NHGWCBNTTCRDCTTCYHN
NDRGAAGHYGAANVGWCDN		 Dap-seq
OMalley et al.(2016)
RKD2_col_a 		0.816 0.816
RKD2
M07250_2.00 		Arabidopsis thaliana
GWCBBTTCRDMTTCC
GGAAKHYGAAVVGWC		 Dap-seq
OMalley et al.(2016)
RKD2_colamp_a 		0.816 0.816
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
mrna26015.1-v1.0-hybrid RWP-RK 174 222

Links

Other RWP-RK family TFs
Other Fragaria vesca TFs

84 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CpipJ_CPIJ007224 Culex pipiens CpipJ_CPIJ007224 N
AAEL001033 Aedes aegypti AAEL001033 N
CPIJ007224 Culex quinquefasciatus CPIJ007224 N
MCINX005293 Melitaea cinxia MCINX005293 N
RPRC012768 Rhodnius prolixus RPRC012768 N
TC003775 Tribolium castaneum TC003775 N
LDEC018179 Leptinotarsa decemlineata LDEC018179 N