orange1.1g036926m.g (Citrus sinensis)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02042 (RWP-RK) IPR003035 orange1.1g036926m.g T321208_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RKD2
M07249_2.00 		Arabidopsis thaliana
NHGWCBNTTCRDCTTCYHN
NDRGAAGHYGAANVGWCDN		 Dap-seq
OMalley et al.(2016)
RKD2_col_a 		0.844 0.844
RKD2
M07250_2.00 		Arabidopsis thaliana
GWCBBTTCRDMTTCC
GGAAKHYGAAVVGWC		 Dap-seq
OMalley et al.(2016)
RKD2_colamp_a 		0.844 0.844
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g036926m RWP-RK 1 45

Links

Other RWP-RK family TFs
Other Citrus sinensis TFs

91 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PPAI008930 Phlebotomus papatasi PPAI008930 N
AARA005398 Anopheles arabiensis AARA005398 N
AATE013347 Anopheles atroparvus AATE013347 N
ACUA015214 Anopheles culicifacies ACUA015214 N
ADIR004989 Anopheles dirus ADIR004989 N
AFAF002833 Anopheles farauti AFAF002833 N
AFUN008632 Anopheles funestus AFUN008632 N
AMAM016984 Anopheles maculatus AMAM016984 N
ASIS022569 Anopheles sinensis ASIS022569 N
ASIS022602 Anopheles sinensis ASIS022602 N
ASTEI07322 Anopheles stephensi ASTEI07322 N
LDEC020738 Leptinotarsa decemlineata LDEC020738 N
ASIM_0001581901 Anisakis simplex ASIM_0001581901 N
DME_0000858201 Dracunculus medinensis DME_0000858201 N
GPUH_0002286201 Gongylonema pulchrum GPUH_0002286201 N
L889_g12163 Steinernema feltiae L889_g12163 N
L893_g23375 Steinernema glaseri L893_g23375 N
SBAD_0001083101 Soboliphyme baturini SBAD_0001083101 N
scaffold152-EXSNAP2012.15 Pristionchus exspectatus scaffold152-EXSNAP2012.15 N
SMRZ_0001144901 Schistosoma margrebowiei SMRZ_0001144901 N
SPER_0000300601 Spirometra erinaceieuropaei SPER_0000300601 N
RPRC005969 Rhodnius prolixus RPRC005969 N
CpipJ_CPIJ012536 Culex pipiens CpipJ_CPIJ012536 N
ACEP13748 Atta cephalotes ACEP13748 N
ACEP24768 Atta cephalotes ACEP24768 N
BGIBMGA006133 Bombyx mori BGIBMGA006133 N
CPIJ002496 Culex quinquefasciatus CPIJ002496 N
CPIJ012536 Culex quinquefasciatus CPIJ012536 N
ISCW020918 Ixodes scapularis ISCW020918 N
MCINX006866 Melitaea cinxia MCINX006866 N
MESCA008698 Megaselia scalaris MESCA008698 N
RPRC005967 Rhodnius prolixus RPRC005967 N
CpipJ_CPIJ002496 Culex pipiens CpipJ_CPIJ002496 N
SINV20314 Solenopsis invicta SINV20314 N
SINV24825 Solenopsis invicta SINV24825 N
SMAR014254 Strigamia maritima SMAR014254 N
Myotis_brandtii_Gfi1_10004111 Myotis brandtii Myotis_brandtii_Gfi1_10004111 N
gw.266.126.1 Branchiostoma floridae gw.266.126.1 N
Ocbimv22006972m.g Octopus bimaculoides Ocbimv22006972m.g N
CLEC007059 Cimex lectularius CLEC007059 N
CLEC007062 Cimex lectularius CLEC007062 N
LCUP009738 Lucilia cuprina LCUP009738 N