POPTR_0006s13230 (Populus trichocarpa)
S1FA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04689 (S1FA) IPR006779 POPTR_0006s13230 T321423_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
S1FA3
M07252_2.00 		Arabidopsis thaliana
RGAASNTTCTAGAAN
NTTCTAGAANSTTCY		 Dap-seq
OMalley et al.(2016)
AT3G09735_col_a 		0.803 0.803
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0006s13230.1 S1FA 23 88

Links

Other S1FA family TFs
Other Populus trichocarpa TFs

107 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OPUNC01G33690 Oryza punctata OPUNC01G33690 I
Traes_1BL_CF98E922B Triticum aestivum Traes_1BL_CF98E922B I
TRIUR3_17275 Triticum urartu TRIUR3_17275 I
MDP0000841703 Malus domestica MDP0000841703 I
OLONG_003390 Oryza longistaminata OLONG_003390 N
ORGLA05G0183100 Oryza glaberrima ORGLA05G0183100 N
SELMODRAFT_93784 Selaginella moellendorffii SELMODRAFT_93784 N
Traes_1AL_B68E59AAB Triticum aestivum Traes_1AL_B68E59AAB N
Traes_1DL_57F246ADF Triticum aestivum Traes_1DL_57F246ADF N
30064.m000484 Ricinus communis 30064.m000484 N