mgf004062m (Mimulus guttatus)
S1FA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04689 (S1FA) IPR006779 mgf004062m T321478_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
S1FA3
M07252_2.00 		Arabidopsis thaliana
RGAASNTTCTAGAAN
NTTCTAGAANSTTCY		 Dap-seq
OMalley et al.(2016)
AT3G09735_col_a 		0.773 0.773
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
mgf004062m S1FA 12 77

Links

Other S1FA family TFs
Other Mimulus guttatus TFs

81 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
S1FA3 Arabidopsis thaliana AT3G09735 D 0.773
Cucsa.124240 Cucumis sativus Cucsa.124240 I 0.818
Cagra.2515s0064 Capsella grandiflora Cagra.2515s0064 I 0.803
Cagra.0666s0032 Capsella grandiflora Cagra.0666s0032 I 0.788
Cagra.0612s0062 Capsella grandiflora Cagra.0612s0062 I 0.712
Bostr.23794s0377 Boechera stricta Bostr.23794s0377 I 0.788
Bostr.22252s0094 Boechera stricta Bostr.22252s0094 I 0.788
Bostr.11793s0058 Boechera stricta Bostr.11793s0058 I 0.727
Aquca_027_00077 Aquilegia coerulea Aquca_027_00077 I 0.758
mgf000337m Mimulus guttatus mgf000337m I 0.864
Cucsa.307040 Cucumis sativus Cucsa.307040 I 0.818
Carubv10018341m.g Capsella rubella Carubv10018341m.g I 0.712
cassava45931.m1 Manihot esculenta cassava45931.m1 I 0.833
29805.m001471 Ricinus communis 29805.m001471 I 0.803
Cla018556 Citrullus lanatus Cla018556 I 0.788
Cla018106 Citrullus lanatus Cla018106 I 0.833
Ca_12028 Cicer arietinum Ca_12028 I 0.712
Ca_12027 Cicer arietinum Ca_12027 I 0.742
AMTR_s00052p00202630 Amborella trichopoda AMTR_s00052p00202630 I 0.758
VIT_06s0004g03160 Vitis vinifera VIT_06s0004g03160 I 0.803
Lus10015073.g Linum usitatissimum Lus10015073.g I 0.803
chr1.CM0033.550.nc Lotus japonicus chr1.CM0033.550.nc I 0.773
PK08477.1 Cannabis sativa PK08477.1 I 0.773
Thhalv10021874m.g Eutrema salsugineum Thhalv10021874m.g I 0.803
Thhalv10017496m.g Eutrema salsugineum Thhalv10017496m.g I 0.758
Thhalv10010878m.g Eutrema salsugineum Thhalv10010878m.g I 0.742
SapurV1A.0209s0130 Salix purpurea SapurV1A.0209s0130 I 0.864
SapurV1A.0112s0080 Salix purpurea SapurV1A.0112s0080 I 0.879
orange1.1g044991m.g Citrus sinensis orange1.1g044991m.g I 0.803
Lus10023177.g Linum usitatissimum Lus10023177.g I 0.803
Carubv10015035m.g Capsella rubella Carubv10015035m.g I 0.803
Gorai.009G419300 Gossypium raimondii Gorai.009G419300 I 0.818
Gorai.006G168100 Gossypium raimondii Gorai.006G168100 I 0.788
Gorai.002G249300 Gossypium raimondii Gorai.002G249300 I 0.803
evm.TU.supercontig_638.2 Carica papaya evm.TU.supercontig_638.2 I 0.788
Eucgr.A01168 Eucalyptus grandis Eucgr.A01168 I 0.742
Ciclev10013218m.g Citrus clementina Ciclev10013218m.g I 0.803
Carubv10025429m.g Capsella rubella Carubv10025429m.g I 0.788
VIT_08s0040g02220 Vitis vinifera VIT_08s0040g02220 I 0.727
Bra003132 Brassica rapa Bra003132 I 0.758
GLYMA13G20160 Glycine max GLYMA13G20160 I 0.773
TCM_022113 Theobroma cacao TCM_022113 I 0.803
GLYMA03G33640 Glycine max GLYMA03G33640 I 0.773
fgenesh2_kg.3__997__AT3G09735.1 Arabidopsis lyrata fgenesh2_kg.3__997__AT3G09735.1 I 0.781
fgenesh1_pm.C_scaffold_5001425 Arabidopsis lyrata fgenesh1_pm.C_scaffold_5001425 I 0.742
Bra039779 Brassica rapa Bra039779 I 0.773
Bra034084 Brassica rapa Bra034084 I 0.788
Bra029784 Brassica rapa Bra029784 I 0.803
Bra006994 Brassica rapa Bra006994 I 0.727
GLYMA10G05790 Glycine max GLYMA10G05790 I 0.727
Bo6g067310 Brassica oleracea Bo6g067310 I 0.758
Bo5g138130 Brassica oleracea Bo5g138130 I 0.788
Bo3g061880 Brassica oleracea Bo3g061880 I 0.773
Bo1g144300 Brassica oleracea Bo1g144300 I 0.788
Bo00703s150 Brassica oleracea Bo00703s150 I 0.758
Bo00703s130 Brassica oleracea Bo00703s130 I 0.758
S1FA1 Arabidopsis thaliana AT3G53370 I 0.742
S1FA2 Arabidopsis thaliana AT2G37120 I 0.773
PGSC0003DMG400020934 Solanum tuberosum PGSC0003DMG400020934 I 0.864
Solyc09g007500.2 Solanum lycopersicum Solyc09g007500.2 I 0.818
scaffold_402348.1 Arabidopsis lyrata scaffold_402348.1 I 0.788
POPTR_0016s08890 Populus trichocarpa POPTR_0016s08890 I 0.848
POPTR_0006s13230 Populus trichocarpa POPTR_0006s13230 I 0.833
PGSC0003DMG401017590 Solanum tuberosum PGSC0003DMG401017590 I 0.848
GLYMA19G36350 Glycine max GLYMA19G36350 I 0.758
PGSC0003DMG400001772 Solanum tuberosum PGSC0003DMG400001772 I 0.803
OB04G18770 Oryza brachyantha OB04G18770 I 0.712
MTR_7g100905 Medicago truncatula MTR_7g100905 I 0.788
MTR_7g100890 Medicago truncatula MTR_7g100890 I 0.758
MTR_7g100880 Medicago truncatula MTR_7g100880 I 0.788
LPERR04G08410 Leersia perrieri LPERR04G08410 I 0.727
GSMUA_Achr10G13120_001 Musa acuminata GSMUA_Achr10G13120_001 I 0.742
gene09647-v1.0-hybrid Fragaria vesca gene09647-v1.0-hybrid N 0.803
MDP0000276000 Malus domestica MDP0000276000 N 0.773
Pavir.Ga01929 Panicum virgatum Pavir.Ga01929 N 0.727
Pavir.Gb01773 Panicum virgatum Pavir.Gb01773 N 0.712
Pm002519 Prunus mume Pm002519 N 0.773
GSMUA_Achr6G23400_001 Musa acuminata GSMUA_Achr6G23400_001 N 0.712
PRUPE_ppa014157mg Prunus persica PRUPE_ppa014157mg N 0.773
GSMUA_Achr3G17900_001 Musa acuminata GSMUA_Achr3G17900_001 N 0.712
Si011030m.g Setaria italica Si011030m.g N 0.712