si:ch73-302a13.2 (Gasterosteus aculeatus)
SAND

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01342 (SAND) IPR000770 ENSGACG00000003620 T321718_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
gmeb1.S
M02469_2.00
Xenopus laevis
NKACGTVY

RBACGTMN
PBM
Weirauch et al.(2014)
pTH9298
0.977 0.760
gmeb1
M02468_2.00
Xenopus tropicalis
NNRCGYNNN

NNNRCGYNN
PBM
Weirauch et al.(2014)
pTH8745
0.977 0.747
GMEB2
M02462_2.00
Meleagris gallopavo
BBACGYH

DRCGTVV
PBM
Weirauch et al.(2014)
pTH9211
0.973 0.787
Gmeb2
M00824_2.00
Mus musculus
NNACGYNN

NNRCGTNN
PBM
Weirauch et al.(2013)
pTH3084
0.973 0.773
GMEB2
M03471_2.00
Homo sapiens
YBACGYAM

KTRCGTVR
SELEX
Jolma et al.(2013)
GMEB2_1
0.973 0.773
GMEB2
M03472_2.00
Homo sapiens
WACGTGSTYACGYW

WRCGTRASCACGTW
SELEX
Jolma et al.(2013)
GMEB2_2
0.973 0.773
GMEB2
M03473_2.00
Homo sapiens
YACGTAACBBACGYA

TRCGTVVGTTACGTR
SELEX
Jolma et al.(2013)
GMEB2_3
0.973 0.773
GMEB2
M03474_2.00
Homo sapiens
BKACGTAM

KTACGTMV
SELEX
Jolma et al.(2013)
GMEB2_4
0.973 0.773
GMEB2
M05735_2.00
Homo sapiens
BYACGTAVSBTACGTRV

BYACGTAVSBTACGTRV
SELEX
Yin et al.(2017)
GMEB2_eDBD_HT-SELEX
0.973 0.773
GMEB2
M05736_2.00
Homo sapiens
BBACGYAMVBNACGYVV

BBRCGTNVBKTRCGTVV
SELEX
Yin et al.(2017)
GMEB2_eDBD_Methyl-HT-SELEX
0.973 0.773
GMEB1
M02461_2.00
Meleagris gallopavo
NNACGYNNN

NNNRCGTNN
PBM
Weirauch et al.(2014)
pTH8318
0.970 0.747
ENSMODG00000010947
M02463_2.00
Monodelphis domestica
NNRCGYN

NRCGYNN
PBM
Weirauch et al.(2014)
pTH8671
0.970 0.747
GMEB1
M02460_2.00
Homo sapiens
NNVCGYNNN

NNNRCGBNN
PBM
Weirauch et al.(2014)
pTH9026
0.970 0.733
Gmeb1
M00190_2.00
Mus musculus
NNRCGYNNN

NNNRCGYNN
PBM
Badis et al.(2009)
Gmeb1_1745
0.970 0.733
GMEB1
M02465_2.00
Pteropus vampyrus
NBACGYHN

NDRCGTVN
PBM
Weirauch et al.(2014)
pTH9282
0.970 0.733
GMEB1
M05737_2.00
Homo sapiens
KKACGTAMNKTACGTAM

KTACGTAMNKTACGTMM
SELEX
Yin et al.(2017)
GMEB1_FL_HT-SELEX
0.970 0.733
GMEB1
M05738_2.00
Homo sapiens
KNRCGTVRBBVCGYHN

NDRCGBVVYBACGYNM
SELEX
Yin et al.(2017)
GMEB1_FL_Methyl-HT-SELEX
0.970 0.733
GMEB2
M02458_2.00
Anolis carolinensis
NNACGYANN

NNTRCGTNN
PBM
Weirauch et al.(2014)
pTH9219
0.969 0.773
ENSCING00000003435
M02459_2.00
Ciona intestinalis
NKACGTMVNN

NNBKACGTMN
PBM
Weirauch et al.(2014)
pTH9356
0.950 0.640
For this family, TFs with SR scores > 0.843 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSGACP00000004744 SAND 91 166

Links

Other SAND family TFs
Other Gasterosteus aculeatus TFs

138 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
RFX5 Homo sapiens ENSG00000143390 D 0.000
rfx5 Tetraodon nigroviridis ENSTNIG00000005388 I 0.000
ENSORLG00000001269 Oryzias latipes ENSORLG00000001269 I 0.000
ENSPANG00000005712 Papio anubis ENSPANG00000005712 I 0.000
RFX5 Procavia capensis ENSPCAG00000011056 I 0.000
ENSPFOG00000010592 Poecilia formosa ENSPFOG00000010592 I 0.000
ENSPPYG00000000867 Pongo abelii ENSPPYG00000000867 I 0.000
ENSPSIG00000018073 Pelodiscus sinensis ENSPSIG00000018073 I 0.000
RFX5 Pan troglodytes ENSPTRG00000001286 I 0.000
RFX5 Pteropus vampyrus ENSPVAG00000011680 I 0.000
Rfx5 Rattus norvegicus ENSRNOG00000021012 I 0.000
RFX5 Sorex araneus ENSSARG00000000750 I 0.000
ENSSHAG00000014366 Sarcophilus harrisii ENSSHAG00000014366 I 0.000
RFX5 Sus scrofa ENSSSCG00000006625 I 0.000
ENSSTOG00000013246 Ictidomys tridecemlineatus ENSSTOG00000013246 I 0.000
RFX5 Tupaia belangeri ENSTBEG00000006419 I 0.000
RFX5 Otolemur garnettii ENSOGAG00000008120 I 0.000
ENSTRUG00000000177 Takifugu rubripes ENSTRUG00000000177 I 0.000
RFX5 Tursiops truncatus ENSTTRG00000007023 I 0.000
ENSXMAG00000017295 Xiphophorus maculatus ENSXMAG00000017295 I 0.000
Aan_R010941 Calypte anna Aan_R010941 I 0.000
Afo_R007667 Aptenodytes forsteri Afo_R007667 I 0.000
Alligator_sinensis_CCG020683.1 Alligator sinensis Alligator_sinensis_CCG020683.1 I 0.000
ENSP00000389130-D1 Bos grunniens ENSP00000389130-D1 I 0.000
ENSP00000389130 Macaca fascicularis ENSP00000389130 I 0.000
Gfo_R003263 Geospiza fortis Gfo_R003263 I 0.000
Myotis_brandtii_RFX5_10008035 Myotis brandtii Myotis_brandtii_RFX5_10008035 I 0.000
Ogr13052 Ophisaurus gracilis Ogr13052 I 0.000
Pvit_04986 Pogona vitticeps Pvit_04986 I 0.000
rfx5 Xenopus tropicalis XB-GENE-5942579 I 0.000
rfx5.S Xenopus laevis XB-GENE-6079297 I 0.000
RFX5 Felis catus ENSFCAG00000005568 I 0.000
ENSAMEG00000000695 Ailuropoda melanoleuca ENSAMEG00000000695 I 0.000
ENSAMXG00000008359 Astyanax mexicanus ENSAMXG00000008359 I 0.000
RFX5 Bos taurus ENSBTAG00000017580 I 0.000
RFX5 Canis familiaris ENSCAFG00000012661 I 0.000
RFX5 Choloepus hoffmanni ENSCHOG00000012900 I 0.000
RFX5 Callithrix jacchus ENSCJAG00000007482 I 0.000
ENSCPOG00000010643 Cavia porcellus ENSCPOG00000010643 I 0.000
ENSCSAG00000001799 Chlorocebus sabaeus ENSCSAG00000001799 I 0.000
rfx5 Danio rerio ENSDARG00000063258 I 0.000
ENSDORG00000015967 Dipodomys ordii ENSDORG00000015967 I 0.000
RFX5 Equus caballus ENSECAG00000024774 I 0.000
RFX5 Erinaceus europaeus ENSEEUG00000010785 I 0.000
RFX5 Echinops telfairi ENSETEG00000013503 I 0.000
ENSFALG00000010929 Ficedula albicollis ENSFALG00000010929 I 0.000
ENSONIG00000003955 Oreochromis niloticus ENSONIG00000003955 I 0.000
RFX5 Gallus gallus ENSGALG00000000836 I 0.000
RFX5 Gorilla gorilla ENSGGOG00000016795 I 0.000
RFX5 Loxodonta africana ENSLAFG00000030906 I 0.000
ENSLOCG00000008459 Lepisosteus oculatus ENSLOCG00000008459 I 0.000
ENSMEUG00000011101 Macropus eugenii ENSMEUG00000011101 I 0.000
ENSMGAG00000001126 Meleagris gallopavo ENSMGAG00000001126 I 0.000
RFX5 Myotis lucifugus ENSMLUG00000015218 I 0.000
ENSMMUG00000013172 Macaca mulatta ENSMMUG00000013172 I 0.000
ENSMPUG00000003735 Mustela putorius furo ENSMPUG00000003735 I 0.000
Rfx5 Mus musculus ENSMUSG00000005774 I 0.000
ENSNLEG00000010170 Nomascus leucogenys ENSNLEG00000010170 I 0.000
ENSOARG00000020987 Ovis aries ENSOARG00000020987 I 0.000
ENSOCUG00000011564 Oryctolagus cuniculus ENSOCUG00000011564 I 0.000
ENSACAG00000029645 Anolis carolinensis ENSACAG00000029645 I 0.000