SPL14 (Arabidopsis thaliana)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03110 (SBP) IPR004333 AT1G20980 T322387_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SPL14
M02470_2.00		 Arabidopsis thaliana
NNNRTACNN
NNGTAYNNN		 PBM
Weirauch et al.(2014)
pTH8191		 (Direct) (Direct)
SPL14
M07253_2.00		 Arabidopsis thaliana
NNNBGTACGGW
WCCGTACVNNN		 Dap-seq
OMalley et al.(2016)
SPL14_col_a		 (Direct) (Direct)
SPL14
M11270_2.00		 Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$SPL14_01		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
POPTR_0002s00440
M02477_2.00 		Populus trichocarpa
NGTACGG
CCGTACN		 PBM
Weirauch et al.(2014)
pTH9280 		0.980 0.933
AT1G76580
M02473_2.00 		Arabidopsis thaliana
NNNRTAYNNN
NNNRTAYNNN		 PBM
Weirauch et al.(2014)
pTH8668 		0.977 0.960
SPL12
M02475_2.00 		Arabidopsis thaliana
NGTACGDN
NHCGTACN		 PBM
Weirauch et al.(2014)
pTH7500 		0.974 0.840
PRUPE_ppa000682mg
M02478_2.00 		Prunus persica
NNNNGTACGD
HCGTACNNNN		 PBM
Weirauch et al.(2014)
pTH9281 		0.970 0.920
PK06791.1
M02482_2.00 		Cannabis sativa
NNGTACGRN
NYCGTACNN		 PBM
Weirauch et al.(2014)
pTH9583 		0.970 0.827
SPL4
M02472_2.00 		Arabidopsis thaliana
NRTACDDNN
NNHHGTAYN		 PBM
Weirauch et al.(2014)
pTH7408 		0.962 0.720
SPL1
M00887_2.00 		Arabidopsis thaliana
NGTACGGHN
NDCCGTACN		 PBM
Franco-Zorrilla et al.(2014)
SPL1 		0.959 0.827
SPL1
M07259_2.00 		Arabidopsis thaliana
NNNBGTACGGW
WCCGTACVNNN		 Dap-seq
OMalley et al.(2016)
SPL1_col_a 		0.959 0.827
SPL1
M07260_2.00 		Arabidopsis thaliana
NNGTACGKWH
DWMCGTACNN		 Dap-seq
OMalley et al.(2016)
SPL1_colamp_a 		0.959 0.827
SPL5
M02474_2.00 		Arabidopsis thaliana
NNGTACGDN
NHCGTACNN		 PBM
Weirauch et al.(2014)
pTH7385 		0.957 0.720
SPL5
M07261_2.00 		Arabidopsis thaliana
NDNYGTACGGAH
DTCCGTACRNHN		 Dap-seq
OMalley et al.(2016)
SPL5_col_a 		0.957 0.720
SPL5
M07262_2.00 		Arabidopsis thaliana
NBGTACGGWH
DWCCGTACVN		 Dap-seq
OMalley et al.(2016)
SPL5_colamp_a 		0.957 0.720
PK22320.1
M02483_2.00 		Cannabis sativa
NNGTACGGNN
NNCCGTACNN		 PBM
Weirauch et al.(2014)
pTH9723 		0.951 0.707
estExt_fgenesh1_pg.C_1940033
M02479_2.00 		Physcomitrella patens
NNGTACGDH
DHCGTACNN		 PBM
Weirauch et al.(2014)
pTH8664 		0.947 0.733
SPL3
M07255_2.00 		Arabidopsis thaliana
NGTACGGA
TCCGTACN		 Dap-seq
OMalley et al.(2016)
SPL3_col_a 		0.931 0.693
SPL3
M07256_2.00 		Arabidopsis thaliana
NDNTGTACGGAHN
NDTCCGTACANHN		 Dap-seq
OMalley et al.(2016)
SPL3_colamp_a 		0.931 0.693
SPL3
M02715_2.00 		Arabidopsis thaliana
DDDDDNGTACGKHHHH
DDDDMCGTACNHHHHH		 SELEX
Mathelier et al.(2014)
MA0577.1 		0.931 0.693
SPL13A
M07265_2.00 		Arabidopsis thaliana
DNYGTACGGWH
DWCCGTACRNH		 Dap-seq
OMalley et al.(2016)
SPL13_col_a 		0.907 0.653
For this family, TFs with SR scores > 0.885 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M02470_2.00 SBP 52 126

DNA Binding Domains

Protein ID Domain From To Sequence
AT1G20980.1 SBP 120 194

Links

Other SBP family TFs
Other Arabidopsis thaliana TFs

509 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
LIN28B Homo sapiens ENSG00000187772 D 0.000
LIN28B Anolis carolinensis ENSACAG00000003957 I 0.000
ENSAMEG00000010582 Ailuropoda melanoleuca ENSAMEG00000010582 I 0.000
ENSAMEG00000011453 Ailuropoda melanoleuca ENSAMEG00000011453 I 0.000
ENSAMXG00000001573 Astyanax mexicanus ENSAMXG00000001573 I 0.000
ENSAMXG00000001888 Astyanax mexicanus ENSAMXG00000001888 I 0.000
ENSAMXG00000016813 Astyanax mexicanus ENSAMXG00000016813 I 0.000
ENSBTAG00000040497 Bos taurus ENSBTAG00000040497 I 0.000
ENSBTAG00000048256 Bos taurus ENSBTAG00000048256 I 0.000
LIN28B Canis familiaris ENSCAFG00000003598 I 0.000
LIN28A Canis familiaris ENSCAFG00000012488 I 0.000
LIN28B Choloepus hoffmanni ENSCHOG00000001682 I 0.000
LIN28B Callithrix jacchus ENSCJAG00000001671 I 0.000
LIN28A Callithrix jacchus ENSCJAG00000009796 I 0.000
ENSCJAG00000016916 Callithrix jacchus ENSCJAG00000016916 I 0.000
ENSCJAG00000021979 Callithrix jacchus ENSCJAG00000021979 I 0.000
ENSCSAG00000000975 Chlorocebus sabaeus ENSCSAG00000000975 I 0.000
LIN28A Danio rerio ENSDARG00000004328 I 0.000
lin28a Danio rerio ENSDARG00000016999 I 0.000
lin28b Danio rerio ENSDARG00000052511 I 0.000
LIN28A Dasypus novemcinctus ENSDNOG00000010710 I 0.000
LIN28B Dasypus novemcinctus ENSDNOG00000015300 I 0.000
LIN28A Equus caballus ENSECAG00000020267 I 0.000
LIN28B Equus caballus ENSECAG00000020994 I 0.000
LIN28B Erinaceus europaeus ENSEEUG00000003632 I 0.000
LIN28A Erinaceus europaeus ENSEEUG00000012085 I 0.000
LIN28B Echinops telfairi ENSETEG00000015340 I 0.000
ENSFALG00000000374 Ficedula albicollis ENSFALG00000000374 I 0.000
LIN28B Felis catus ENSFCAG00000005058 I 0.000
LIN28A Felis catus ENSFCAG00000012810 I 0.000
LIN28A Homo sapiens ENSG00000131914 I 0.000
lin28a Gasterosteus aculeatus ENSGACG00000007826 I 0.000
si:ch1073-284b18.2 Gasterosteus aculeatus ENSGACG00000013893 I 0.000
ENSGALG00000000388 Gallus gallus ENSGALG00000000388 I 0.000
LIN28B Gallus gallus ENSGALG00000026761 I 0.000
LIN28B Gorilla gorilla ENSGGOG00000015437 I 0.000
LIN28A Gorilla gorilla ENSGGOG00000024918 I 0.000
ENSGMOG00000010704 Gadus morhua ENSGMOG00000010704 I 0.000
ENSGMOG00000015523 Gadus morhua ENSGMOG00000015523 I 0.000
ENSGMOG00000015660 Gadus morhua ENSGMOG00000015660 I 0.000
ENSLACG00000004053 Latimeria chalumnae ENSLACG00000004053 I 0.000
LIN28A Loxodonta africana ENSLAFG00000017525 I 0.000
LIN28B Loxodonta africana ENSLAFG00000017788 I 0.000
ENSLOCG00000003353 Lepisosteus oculatus ENSLOCG00000003353 I 0.000
ENSMEUG00000008743 Macropus eugenii ENSMEUG00000008743 I 0.000
LIN28A Meleagris gallopavo ENSMGAG00000009456 I 0.000
ENSMICG00000002297 Microcebus murinus ENSMICG00000002297 I 0.000
ENSMLUG00000010158 Myotis lucifugus ENSMLUG00000010158 I 0.000
LIN28B Macaca mulatta ENSMMUG00000014470 I 0.000
LIN28B Monodelphis domestica ENSMODG00000018035 I 0.000
ENSMPUG00000009489 Mustela putorius furo ENSMPUG00000009489 I 0.000
ENSMPUG00000015724 Mustela putorius furo ENSMPUG00000015724 I 0.000
Lin28a Mus musculus ENSMUSG00000050966 I 0.000
Lin28b Mus musculus ENSMUSG00000063804 I 0.000
ENSNLEG00000009294 Nomascus leucogenys ENSNLEG00000009294 I 0.000
ENSNLEG00000014146 Nomascus leucogenys ENSNLEG00000014146 I 0.000
LIN28B Ornithorhynchus anatinus ENSOANG00000010299 I 0.000
ENSOARG00000004614 Ovis aries ENSOARG00000004614 I 0.000
ENSOARG00000011404 Ovis aries ENSOARG00000011404 I 0.000
ENSOCUG00000000299 Oryctolagus cuniculus ENSOCUG00000000299 I 0.000
ENSOCUG00000027473 Oryctolagus cuniculus ENSOCUG00000027473 I 0.000
ENSOCUG00000027786 Oryctolagus cuniculus ENSOCUG00000027786 I 0.000
LIN28A Otolemur garnettii ENSOGAG00000003971 I 0.000
LIN28B Otolemur garnettii ENSOGAG00000011042 I 0.000
ENSONIG00000016204 Oreochromis niloticus ENSONIG00000016204 I 0.000
LIN28A Ochotona princeps ENSOPRG00000001591 I 0.000
LIN28B Ochotona princeps ENSOPRG00000006333 I 0.000
ENSPANG00000005196 Papio anubis ENSPANG00000005196 I 0.000
ENSPANG00000009841 Papio anubis ENSPANG00000009841 I 0.000
ENSPFOG00000014054 Poecilia formosa ENSPFOG00000014054 I 0.000
ENSPFOG00000019352 Poecilia formosa ENSPFOG00000019352 I 0.000
ENSPPYG00000001684 Pongo abelii ENSPPYG00000001684 I 0.000
ENSPPYG00000016875 Pongo abelii ENSPPYG00000016875 I 0.000
ENSPSIG00000002635 Pelodiscus sinensis ENSPSIG00000002635 I 0.000
LIN28A Pan troglodytes ENSPTRG00000000384 I 0.000
LIN28B Pan troglodytes ENSPTRG00000018453 I 0.000
LIN28B Pteropus vampyrus ENSPVAG00000008797 I 0.000
LIN28A Pteropus vampyrus ENSPVAG00000017267 I 0.000
Lin28b Rattus norvegicus ENSRNOG00000025938 I 0.000
Lin28a Rattus norvegicus ENSRNOG00000060320 I 0.000
LIN28B Sorex araneus ENSSARG00000008374 I 0.000
ENSSHAG00000012434 Sarcophilus harrisii ENSSHAG00000012434 I 0.000
LIN28A Sus scrofa ENSSSCG00000003557 I 0.000
ENSSSCG00000004365 Sus scrofa ENSSSCG00000004365 I 0.000
ENSSTOG00000002692 Ictidomys tridecemlineatus ENSSTOG00000002692 I 0.000
ENSSTOG00000004329 Ictidomys tridecemlineatus ENSSTOG00000004329 I 0.000
lin28a Tetraodon nigroviridis ENSTNIG00000009802 I 0.000
LIN28B Tetraodon nigroviridis ENSTNIG00000012302 I 0.000
lin28a Takifugu rubripes ENSTRUG00000009454 I 0.000
ENSTSYG00000006480 Tarsius syrichta ENSTSYG00000006480 I 0.000
ENSTSYG00000011513 Tarsius syrichta ENSTSYG00000011513 I 0.000
LIN28A Tursiops truncatus ENSTTRG00000005678 I 0.000
LIN28B Tursiops truncatus ENSTTRG00000014919 I 0.000
ENSVPAG00000008073 Vicugna pacos ENSVPAG00000008073 I 0.000
ENSXMAG00000003450 Xiphophorus maculatus ENSXMAG00000003450 I 0.000
ENSXMAG00000014593 Xiphophorus maculatus ENSXMAG00000014593 I 0.000
Aan_R002277 Calypte anna Aan_R002277 I 0.000
Aan_R005866 Calypte anna Aan_R005866 I 0.000
Alligator_sinensis_CCG010967.1 Alligator sinensis Alligator_sinensis_CCG010967.1 I 0.000
Cmyd_10006225 Chelonia mydas Cmyd_10006225 I 0.000
Cmyd_10009744 Chelonia mydas Cmyd_10009744 I 0.000
ENSBTAP00000004196-D2 Bos grunniens ENSBTAP00000004196-D2 I 0.000
ENSBTAP00000053651-D1 Bos grunniens ENSBTAP00000053651-D1 I 0.000
ENSMMUP00000018998 Macaca fascicularis ENSMMUP00000018998 I 0.000
ENSP00000254231 Macaca fascicularis ENSP00000254231 I 0.000
Myotis_brandtii_Lin28a_10029661 Myotis brandtii Myotis_brandtii_Lin28a_10029661 I 0.000
Pvit_09294 Pogona vitticeps Pvit_09294 I 0.000
Pvit_17184 Pogona vitticeps Pvit_17184 I 0.000
yakG040859 Bos grunniens yakG040859 I 0.000
lin28a.S Xenopus laevis XB-GENE-866059 I 0.000
ENSCPOG00000019646 Cavia porcellus ENSCPOG00000019646 N 0.000
LIN28A Procavia capensis ENSPCAG00000013674 N 0.000
LIN28B Vicugna pacos ENSVPAG00000011202 N 0.000