OGLUM09G15430 (Oryza glumaepatula)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03110 (SBP) IPR004333 OGLUM09G15430 T322802_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
estExt_fgenesh1_pg.C_1940033
M02479_2.00 		Physcomitrella patens
NNGTACGDH
DHCGTACNN		 PBM
Weirauch et al.(2014)
pTH8664 		0.931 0.747
PK06791.1
M02482_2.00 		Cannabis sativa
NNGTACGRN
NYCGTACNN		 PBM
Weirauch et al.(2014)
pTH9583 		0.920 0.653
SPL1
M00887_2.00 		Arabidopsis thaliana
NGTACGGHN
NDCCGTACN		 PBM
Franco-Zorrilla et al.(2014)
SPL1 		0.905 0.680
SPL1
M07259_2.00 		Arabidopsis thaliana
NNNBGTACGGW
WCCGTACVNNN		 Dap-seq
OMalley et al.(2016)
SPL1_col_a 		0.905 0.680
SPL1
M07260_2.00 		Arabidopsis thaliana
NNGTACGKWH
DWMCGTACNN		 Dap-seq
OMalley et al.(2016)
SPL1_colamp_a 		0.905 0.680
SPL12
M02475_2.00 		Arabidopsis thaliana
NGTACGDN
NHCGTACN		 PBM
Weirauch et al.(2014)
pTH7500 		0.888 0.667
For this family, TFs with SR scores > 0.885 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OGLUM09G15430.1 SBP 75 156

Links

Other SBP family TFs
Other Oryza glumaepatula TFs

241 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BZIP68 Arabidopsis thaliana AT1G32150 D
BZIP16 Arabidopsis thaliana AT2G35530 D
GBF1 Arabidopsis thaliana AT4G36730 D
HBP1A_WHEAT Triticum aestivum HBP1A_WHEAT D
PK23964.1 Cannabis sativa PK23964.1 D
AMTR_s00048p00108400 Amborella trichopoda AMTR_s00048p00108400 I
AMTR_s00059p00094730 Amborella trichopoda AMTR_s00059p00094730 I
BGIOSGA007448 Oryza indica BGIOSGA007448 I
BGIOSGA036419 Oryza indica BGIOSGA036419 I
Bo1g005460 Brassica oleracea Bo1g005460 I
Bo4g038560 Brassica oleracea Bo4g038560 I
Bo4g183320 Brassica oleracea Bo4g183320 I
Bra005335 Brassica rapa Bra005335 I
Bra010572 Brassica rapa Bra010572 I
Bra011701 Brassica rapa Bra011701 I
BRADI3G02730 Brachypodium distachyon BRADI3G02730 I
BRADI4G39630 Brachypodium distachyon BRADI4G39630 I
F775_32205 Aegilops tauschii F775_32205 I
bZIP68 Arabidopsis lyrata fgenesh2_kg.1__3350__AT1G32150.1 I
GLYMA01G01740 Glycine max GLYMA01G01740 I
GLYMA01G38381 Glycine max GLYMA01G38381 I
GLYMA02G06550 Glycine max GLYMA02G06550 I
GLYMA08G34280 Glycine max GLYMA08G34280 I
GLYMA09G34170 Glycine max GLYMA09G34170 I
GLYMA16G15810 Glycine max GLYMA16G15810 I
GLYMA16G25600 Glycine max GLYMA16G25600 I
GRMZM2G019106 Zea mays GRMZM2G019106 I
GRMZM2G074373 Zea mays GRMZM2G074373 I
GRMZM2G088140 Zea mays GRMZM2G088140 I
GRMZM2G153144 Zea mays GRMZM2G153144 I
GSMUA_Achr4G04530_001 Musa acuminata GSMUA_Achr4G04530_001 I
GSMUA_Achr4G11610_001 Musa acuminata GSMUA_Achr4G11610_001 I
GSMUA_Achr4G18980_001 Musa acuminata GSMUA_Achr4G18980_001 I
GSMUA_Achr5G14150_001 Musa acuminata GSMUA_Achr5G14150_001 I
GSMUA_Achr9G05310_001 Musa acuminata GSMUA_Achr9G05310_001 I
LPERR12G05920 Leersia perrieri LPERR12G05920 I
MLOC_63066 Hordeum vulgare MLOC_63066 I
MLOC_81641 Hordeum vulgare MLOC_81641 I
MTR_5g028850 Medicago truncatula MTR_5g028850 I
MTR_7g116890 Medicago truncatula MTR_7g116890 I
MTR_8g070820 Medicago truncatula MTR_8g070820 I
MTR_8g077950 Medicago truncatula MTR_8g077950 I
OB02G12150 Oryza brachyantha OB02G12150 I
OB12G16310 Oryza brachyantha OB12G16310 I
OBART12G06770 Oryza barthii OBART12G06770 I
OGLUM12G08090 Oryza glumaepatula OGLUM12G08090 I
OLONG_021967 Oryza longistaminata OLONG_021967 I
OMERI12G04560 Oryza meridionalis OMERI12G04560 I
ONIVA02G02170 Oryza nivara ONIVA02G02170 I
ONIVA12G06500 Oryza nivara ONIVA12G06500 I
OPUNC02G01690 Oryza punctata OPUNC02G01690 I
OPUNC12G06450 Oryza punctata OPUNC12G06450 I
ORGLA12G0063500 Oryza glaberrima ORGLA12G0063500 I
ORUFI12G07600 Oryza rufipogon ORUFI12G07600 I
OS02G0128200 Oryza sativa OS02G0128200 I
PGSC0003DMG400012660 Solanum tuberosum PGSC0003DMG400012660 I
PGSC0003DMG400018469 Solanum tuberosum PGSC0003DMG400018469 I
POPTR_0001s01840 Populus trichocarpa POPTR_0001s01840 I
POPTR_0003s09630 Populus trichocarpa POPTR_0003s09630 I
POPTR_0005s12750 Populus trichocarpa POPTR_0005s12750 I
POPTR_0007s12460 Populus trichocarpa POPTR_0007s12460 I
PRUPE_ppa006484mg Prunus persica PRUPE_ppa006484mg I
PRUPE_ppa008024mg Prunus persica PRUPE_ppa008024mg I
Sb04g002360 Sorghum bicolor Sb04g002360 I
Sb08g008300 Sorghum bicolor Sb08g008300 I
GBF1 Arabidopsis lyrata scaffold_700433.1 I
SELMODRAFT_125734 Selaginella moellendorffii SELMODRAFT_125734 I
SELMODRAFT_129391 Selaginella moellendorffii SELMODRAFT_129391 I
SELMODRAFT_135978 Selaginella moellendorffii SELMODRAFT_135978 I
Si017637m.g Setaria italica Si017637m.g I
Si022325m.g Setaria italica Si022325m.g I
Solyc02g062950.2 Solanum lycopersicum Solyc02g062950.2 I
Solyc02g085610.2 Solanum lycopersicum Solyc02g085610.2 I
Solyc08g005290.2 Solanum lycopersicum Solyc08g005290.2 I
Solyc08g076100.2 Solanum lycopersicum Solyc08g076100.2 I
TCM_000436 Theobroma cacao TCM_000436 I
TCM_016606 Theobroma cacao TCM_016606 I
Traes_5AS_3A85F1C2C Triticum aestivum Traes_5AS_3A85F1C2C I
Traes_5BL_A5532B750 Triticum aestivum Traes_5BL_A5532B750 I
Traes_5BS_A5532B750 Triticum aestivum Traes_5BS_A5532B750 I
Traes_5DL_C794C1EEA Triticum aestivum Traes_5DL_C794C1EEA I
Traes_6BS_05264DAEA Triticum aestivum Traes_6BS_05264DAEA I
TRIUR3_18117 Triticum urartu TRIUR3_18117 I
TRIUR3_34165 Triticum urartu TRIUR3_34165 I
VIT_02s0012g02250 Vitis vinifera VIT_02s0012g02250 I
GBF1 Vitis vinifera VIT_04s0023g01360 I
VIT_18s0001g12120 Vitis vinifera VIT_18s0001g12120 I
Ca_01293 Cicer arietinum Ca_01293 I
Ca_11455 Cicer arietinum Ca_11455 I
Ca_15839 Cicer arietinum Ca_15839 I
Cla008988 Citrullus lanatus Cla008988 I
Cla014415 Citrullus lanatus Cla014415 I
Cla016502 Citrullus lanatus Cla016502 I
Pm023132 Prunus mume Pm023132 I
Pm026586 Prunus mume Pm026586 I
29646.m001068 Ricinus communis 29646.m001068 I
30068.m002661 Ricinus communis 30068.m002661 I
cassava11837.valid.m1 Manihot esculenta cassava11837.valid.m1 I
cassava37043.valid.m1 Manihot esculenta cassava37043.valid.m1 I
cassava45491.m1 Manihot esculenta cassava45491.m1 I
Cucsa.104970 Cucumis sativus Cucsa.104970 I
Cucsa.312800 Cucumis sativus Cucsa.312800 I
Cucsa.322110 Cucumis sativus Cucsa.322110 I
estExt_fgenesh1_pg.C_10522 Micromonas pusilla estExt_fgenesh1_pg.C_10522 I
gw1.27.125.1 Physcomitrella patens gw1.27.125.1 I
mgf000639m Mimulus guttatus mgf000639m I
mgf005151m Mimulus guttatus mgf005151m I
mgf008195m Mimulus guttatus mgf008195m I
mgf008605m Mimulus guttatus mgf008605m I
mgf013375m Mimulus guttatus mgf013375m I
mgf014804m Mimulus guttatus mgf014804m I
Bostr.23794s0549 Boechera stricta Bostr.23794s0549 I
Bostr.3359s0141 Boechera stricta Bostr.3359s0141 I
Bostr.7867s1529 Boechera stricta Bostr.7867s1529 I
Cagra.0993s0063 Capsella grandiflora Cagra.0993s0063 I
Cagra.3359s0011 Capsella grandiflora Cagra.3359s0011 I
Cagra.5996s0003 Capsella grandiflora Cagra.5996s0003 I
Carubv10005287m.g Capsella rubella Carubv10005287m.g I
Ciclev10001333m.g Citrus clementina Ciclev10001333m.g I
Ciclev10025963m.g Citrus clementina Ciclev10025963m.g I
estExt_fgenesh2_pg.C_Chr_020452 Micromonas sp RCC299 estExt_fgenesh2_pg.C_Chr_020452 I
Eucgr.E00223 Eucalyptus grandis Eucgr.E00223 I
Eucgr.H01256 Eucalyptus grandis Eucgr.H01256 I
evm.TU.supercontig_158.7 Carica papaya evm.TU.supercontig_158.7 I
evm.TU.supercontig_2741.1 Carica papaya evm.TU.supercontig_2741.1 I
gene13716-v1.0-hybrid Fragaria vesca gene13716-v1.0-hybrid I
gene29546-v1.0-hybrid Fragaria vesca gene29546-v1.0-hybrid I
Genemark1.5055_g Coccomyxa subellipsoidea C169 Genemark1.5055_g I
Gorai.003G185700 Gossypium raimondii Gorai.003G185700 I
Gorai.004G181900 Gossypium raimondii Gorai.004G181900 I
Gorai.007G205700 Gossypium raimondii Gorai.007G205700 I
Gorai.008G068900 Gossypium raimondii Gorai.008G068900 I
gw2.11.550.1 Micromonas sp RCC299 gw2.11.550.1 I
Lus10014324.g Linum usitatissimum Lus10014324.g I
Lus10026033.g Linum usitatissimum Lus10026033.g I
MDP0000185553 Malus domestica MDP0000185553 I
MDP0000231274 Malus domestica MDP0000231274 I
MDP0000286846 Malus domestica MDP0000286846 I
orange1.1g018605m.g Citrus sinensis orange1.1g018605m.g I
orange1.1g036551m.g Citrus sinensis orange1.1g036551m.g I
Pavir.Aa03436 Panicum virgatum Pavir.Aa03436 I
Pavir.Ab00132 Panicum virgatum Pavir.Ab00132 I
Pavir.Ca00403 Panicum virgatum Pavir.Ca00403 I
Pavir.Cb01814 Panicum virgatum Pavir.Cb01814 I
SapurV1A.0051s0250 Salix purpurea SapurV1A.0051s0250 I
SapurV1A.0063s0130 Salix purpurea SapurV1A.0063s0130 I
SapurV1A.0255s0070 Salix purpurea SapurV1A.0255s0070 I
SapurV1A.0817s0110 Salix purpurea SapurV1A.0817s0110 I
Thhalv10007879m.g Eutrema salsugineum Thhalv10007879m.g I
Thhalv10016740m.g Eutrema salsugineum Thhalv10016740m.g I
Thhalv10025733m.g Eutrema salsugineum Thhalv10025733m.g I
chr2.LjT41P23.50.nc Lotus japonicus chr2.LjT41P23.50.nc I
fgeneshCV_pg.C_scaffold_12000127 Chlorella vulgaris fgeneshCV_pg.C_scaffold_12000127 I
LjSGA_036158.1 Lotus japonicus LjSGA_036158.1 I
PDK_20s1310372g001 Phoenix dactylifera PDK_20s1310372g001 I
PDK_20s1348391g002 Phoenix dactylifera PDK_20s1348391g002 I
PDK_20s1368181g001 Phoenix dactylifera PDK_20s1368181g001 I
PDK_20s1372692g002 Phoenix dactylifera PDK_20s1372692g002 I
PDK_20s1568831g001 Phoenix dactylifera PDK_20s1568831g001 I