ONIVA08G24550 (Oryza nivara)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03110 (SBP) IPR004333 ONIVA08G24550 T322848_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SPL13A
M07265_2.00 		Arabidopsis thaliana
DNYGTACGGWH
DWCCGTACRNH		 Dap-seq
OMalley et al.(2016)
SPL13_col_a 		0.896 0.736
For this family, TFs with SR scores > 0.885 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ONIVA08G24550.1 SBP 117 188

Links

Other SBP family TFs
Other Oryza nivara TFs

126 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SPL13A Arabidopsis thaliana AT5G50670 D 0.896
AMTR_s00013p00150040 Amborella trichopoda AMTR_s00013p00150040 I 0.903
SPL13A Arabidopsis thaliana AT5G50570 I 0.896
BGIOSGA005075 Oryza indica BGIOSGA005075 I 0.935
Bo3g024180 Brassica oleracea Bo3g024180 I 0.896
Bo9g097630 Brassica oleracea Bo9g097630 I 0.899
Bra022766 Brassica rapa Bra022766 I 0.893
BRADI2G59110 Brachypodium distachyon BRADI2G59110 I 0.927
BRADI3G41250 Brachypodium distachyon BRADI3G41250 I 0.970
BRADI4G34667 Brachypodium distachyon BRADI4G34667 I 0.978
GLYMA04G37391 Glycine max GLYMA04G37391 I 0.894
GLYMA05G38180 Glycine max GLYMA05G38180 I 0.899
GLYMA06G17700 Glycine max GLYMA06G17700 I 0.894
GLYMA08G01450 Glycine max GLYMA08G01450 I 0.908
GRMZM2G061734 Zea mays GRMZM2G061734 I 0.978
GRMZM2G106798 Zea mays GRMZM2G106798 I 0.928
GRMZM2G371033 Zea mays GRMZM2G371033 I 0.911
GSMUA_Achr11G19580_001 Musa acuminata GSMUA_Achr11G19580_001 I 0.942
GSMUA_Achr2G06150_001 Musa acuminata GSMUA_Achr2G06150_001 I 0.913
GSMUA_Achr4G16050_001 Musa acuminata GSMUA_Achr4G16050_001 I 0.922
GSMUA_Achr5G25090_001 Musa acuminata GSMUA_Achr5G25090_001 I 0.917
GSMUA_Achr6G06030_001 Musa acuminata GSMUA_Achr6G06030_001 I 0.922
GSMUA_Achr6G27520_001 Musa acuminata GSMUA_Achr6G27520_001 I 0.915
GSMUA_Achr7G22940_001 Musa acuminata GSMUA_Achr7G22940_001 I 0.948
GSMUA_Achr9G01380_001 Musa acuminata GSMUA_Achr9G01380_001 I 0.939
GSMUA_Achr9G29330_001 Musa acuminata GSMUA_Achr9G29330_001 I 0.923
GSMUA_AchrUn_randomG05850_001 Musa acuminata GSMUA_AchrUn_randomG05850_001 I 0.945
GSMUA_AchrUn_randomG08380_001 Musa acuminata GSMUA_AchrUn_randomG08380_001 I 0.918
GSMUA_AchrUn_randomG21900_001 Musa acuminata GSMUA_AchrUn_randomG21900_001 I 0.924
LPERR01G36700 Leersia perrieri LPERR01G36700 I 0.937
LPERR08G18310 Leersia perrieri LPERR08G18310 I 0.976
LPERR09G11920 Leersia perrieri LPERR09G11920 I 0.962
LPERR11G11330 Leersia perrieri LPERR11G11330 I 0.904
MLOC_52321 Hordeum vulgare MLOC_52321 I 0.936
MTR_3g099080 Medicago truncatula MTR_3g099080 I 0.894
MTR_8g096780 Medicago truncatula MTR_8g096780 I 0.901
OBART01G42150 Oryza barthii OBART01G42150 I 0.915
OBART09G15750 Oryza barthii OBART09G15750 I 0.962
OGLUM01G46420 Oryza glumaepatula OGLUM01G46420 I 0.935
OGLUM08G22810 Oryza glumaepatula OGLUM08G22810 I 0.980
OGLUM09G16320 Oryza glumaepatula OGLUM09G16320 I 0.962
OMERI01G39190 Oryza meridionalis OMERI01G39190 I 0.935
OMERI06G13610 Oryza meridionalis OMERI06G13610 I 0.980
OMERI11G11920 Oryza meridionalis OMERI11G11920 I 0.917
ONIVA01G48230 Oryza nivara ONIVA01G48230 I 0.935
ONIVA09G16860 Oryza nivara ONIVA09G16860 I 0.962
OPUNC01G41070 Oryza punctata OPUNC01G41070 I 0.935
OPUNC08G19660 Oryza punctata OPUNC08G19660 I 0.971
ORGLA01G0361700 Oryza glaberrima ORGLA01G0361700 I 0.935
ORGLA08G0230100 Oryza glaberrima ORGLA08G0230100 I 0.980
ORGLA11G0121600 Oryza glaberrima ORGLA11G0121600 I 0.934
ORUFI01G45560 Oryza rufipogon ORUFI01G45560 I 0.935
OS01G0922600 Oryza sativa OS01G0922600 I 0.924
SPL16 Oryza sativa OS08G0531600 I 0.980
SPL18 Oryza sativa OS09G0507100 I 0.962
SPL19 Oryza sativa OS11G0496600 I 0.934
PGSC0003DMG400028308 Solanum tuberosum PGSC0003DMG400028308 I 0.894
POPTR_0012s10260 Populus trichocarpa POPTR_0012s10260 I 0.901
POPTR_0015s11100 Populus trichocarpa POPTR_0015s11100 I 0.902
PRUPE_ppa003644mg Prunus persica PRUPE_ppa003644mg I 0.907
PRUPE_ppa006611mg Prunus persica PRUPE_ppa006611mg I 0.901
Sb02g029300 Sorghum bicolor Sb02g029300 I 0.978
Sb03g044160 Sorghum bicolor Sb03g044160 I 0.938
Sb05g017510 Sorghum bicolor Sb05g017510 I 0.953
scaffold_801495.1 Arabidopsis lyrata scaffold_801495.1 I 0.897
Si001804m.g Setaria italica Si001804m.g I 0.905
Si026656m.g Setaria italica Si026656m.g I 0.940
Solyc05g012040.2 Solanum lycopersicum Solyc05g012040.2 I 0.894
TCM_008671 Theobroma cacao TCM_008671 I 0.917
TCM_011483 Theobroma cacao TCM_011483 I 0.907
TCM_014668 Theobroma cacao TCM_014668 I 0.905
VIT_01s0010g03910 Vitis vinifera VIT_01s0010g03910 I 0.918
VIT_17s0000g01260 Vitis vinifera VIT_17s0000g01260 I 0.892
Ca_01426 Cicer arietinum Ca_01426 I 0.894
Ca_05711 Cicer arietinum Ca_05711 I 0.901
Cla002666 Citrullus lanatus Cla002666 I 0.901
Cla004156 Citrullus lanatus Cla004156 I 0.892
Pm024528 Prunus mume Pm024528 I 0.901
Pm025028 Prunus mume Pm025028 I 0.905
29929.m004627 Ricinus communis 29929.m004627 I 0.907
30147.m014478 Ricinus communis 30147.m014478 I 0.886
cassava42933.valid.m1 Manihot esculenta cassava42933.valid.m1 I 0.907
cassava6548.valid.m1 Manihot esculenta cassava6548.valid.m1 I 0.907
Cucsa.054050 Cucumis sativus Cucsa.054050 I 0.892
Cucsa.157230 Cucumis sativus Cucsa.157230 I 0.893
Cucsa.392170 Cucumis sativus Cucsa.392170 I 0.901
mgf003797m Mimulus guttatus mgf003797m I 0.937
mgf010913m Mimulus guttatus mgf010913m I 0.937
Aquca_011_00114 Aquilegia coerulea Aquca_011_00114 I 0.917
Bostr.15774s0206 Boechera stricta Bostr.15774s0206 I 0.897
Cagra.0117s0007 Capsella grandiflora Cagra.0117s0007 I 0.896
Carubv10026628m.g Capsella rubella Carubv10026628m.g I 0.896
Ciclev10031834m.g Citrus clementina Ciclev10031834m.g I 0.904
Ciclev10032171m.g Citrus clementina Ciclev10032171m.g I 0.909
Eucgr.B00631 Eucalyptus grandis Eucgr.B00631 I 0.907
Eucgr.K02708 Eucalyptus grandis Eucgr.K02708 I 0.905
evm.TU.supercontig_1141.2 Carica papaya evm.TU.supercontig_1141.2 I 0.905
gene06295-v1.0-hybrid Fragaria vesca gene06295-v1.0-hybrid I 0.904
gene26117-v1.0-hybrid Fragaria vesca gene26117-v1.0-hybrid I 0.907
Gorai.002G181700 Gossypium raimondii Gorai.002G181700 I 0.926
Gorai.003G102800 Gossypium raimondii Gorai.003G102800 I 0.907
Gorai.005G164600 Gossypium raimondii Gorai.005G164600 I 0.910
Gorai.008G166000 Gossypium raimondii Gorai.008G166000 I 0.917
Gorai.013G095700 Gossypium raimondii Gorai.013G095700 I 0.932
Lus10011348.g Linum usitatissimum Lus10011348.g I 0.903
Lus10015764.g Linum usitatissimum Lus10015764.g I 0.905
orange1.1g016971m.g Citrus sinensis orange1.1g016971m.g I 0.904
orange1.1g021420m.g Citrus sinensis orange1.1g021420m.g I 0.909
Pavir.Ea03909 Panicum virgatum Pavir.Ea03909 I 0.905
Pavir.Hb01173 Panicum virgatum Pavir.Hb01173 I 0.940
Pavir.J02262 Panicum virgatum Pavir.J02262 I 0.905
SapurV1A.0168s0440 Salix purpurea SapurV1A.0168s0440 I 0.895
SapurV1A.1018s0120 Salix purpurea SapurV1A.1018s0120 I 0.896
Thhalv10013892m.g Eutrema salsugineum Thhalv10013892m.g I 0.899
PK02140.1 Cannabis sativa PK02140.1 I 0.900
PK19500.1 Cannabis sativa PK19500.1 I 0.919
GRMZM2G101511 Zea mays GRMZM2G101511 N 0.949
ORUFI08G24030 Oryza rufipogon ORUFI08G24030 N 0.965
Sb07g026220 Sorghum bicolor Sb07g026220 N 0.952
Si013747m.g Setaria italica Si013747m.g N 0.964
Gorai.012G185700 Gossypium raimondii Gorai.012G185700 N 0.917
Lus10003126.g Linum usitatissimum Lus10003126.g N 0.893
Pavir.Ba01534 Panicum virgatum Pavir.Ba01534 N 0.967
Pavir.Fb00717 Panicum virgatum Pavir.Fb00717 N 0.964
Pavir.J28847 Panicum virgatum Pavir.J28847 N 0.964
Pavir.J30793 Panicum virgatum Pavir.J30793 N 0.967