OPUNC04G25460 (Oryza punctata)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03110 (SBP) IPR004333 OPUNC04G25460 T322860_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
fgenesh1_pg.scaffold_252000020
M02481_2.00 		Physcomitrella patens
NNNKRCVNN
NNBGYMNNN		 PBM
Weirauch et al.(2014)
pTH8491 		0.956 0.840
fgenesh1_pg.scaffold_194000034
M02480_2.00 		Physcomitrella patens
NNNGTACNNN
NNNGTACNNN		 PBM
Weirauch et al.(2014)
pTH8580 		0.950 0.827
SPL8
M02714_2.00 		Arabidopsis thaliana
DWWDDDGTACRNWNHW
WDNWNYGTACHHHWWH		 SELEX
Mathelier et al.(2014)
MA0578.1 		0.930 0.827
For this family, TFs with SR scores > 0.885 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OPUNC04G25460.1 SBP 174 249

Links

Other SBP family TFs
Other Oryza punctata TFs

136 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Carubv10005538m.g Capsella rubella Carubv10005538m.g N 0.000
Cla020585 Citrullus lanatus Cla020585 N 0.000
Pm020862 Prunus mume Pm020862 N 0.000
28095.m000094 Ricinus communis 28095.m000094 N 0.000
cassava766.valid.m1 Manihot esculenta cassava766.valid.m1 N 0.000
cassava767.valid.m1 Manihot esculenta cassava767.valid.m1 N 0.000
cassava7721.valid.m1 Manihot esculenta cassava7721.valid.m1 N 0.000
Cucsa.234250 Cucumis sativus Cucsa.234250 N 0.000
Cucsa.370550 Cucumis sativus Cucsa.370550 N 0.000
gw1.34.187.1 Physcomitrella patens gw1.34.187.1 N 0.000
mgf003848m Mimulus guttatus mgf003848m N 0.000
Aquca_075_00033 Aquilegia coerulea Aquca_075_00033 N 0.000
Bostr.18351s0138 Boechera stricta Bostr.18351s0138 N 0.000
Bostr.7867s1363 Boechera stricta Bostr.7867s1363 N 0.000
Cagra.0839s0005 Capsella grandiflora Cagra.0839s0005 N 0.000
Cagra.2350s0050 Capsella grandiflora Cagra.2350s0050 N 0.000
Cla016078 Citrullus lanatus Cla016078 N 0.000
Carubv10014436m.g Capsella rubella Carubv10014436m.g N 0.000
Ciclev10028931m.g Citrus clementina Ciclev10028931m.g N 0.000
Eucgr.I01416 Eucalyptus grandis Eucgr.I01416 N 0.000
evm.TU.supercontig_37.136 Carica papaya evm.TU.supercontig_37.136 N 0.000
gene07554-v1.0-hybrid Fragaria vesca gene07554-v1.0-hybrid N 0.000
Lus10005073.g Linum usitatissimum Lus10005073.g N 0.000
Lus10014121.g Linum usitatissimum Lus10014121.g N 0.000
Lus10027847.g Linum usitatissimum Lus10027847.g N 0.000
MDP0000159670 Malus domestica MDP0000159670 N 0.000
orange1.1g024365m.g Citrus sinensis orange1.1g024365m.g N 0.000
Pavir.J00911 Panicum virgatum Pavir.J00911 N 0.000
SapurV1A.0923s0130 Salix purpurea SapurV1A.0923s0130 N 0.000
Thhalv10022810m.g Eutrema salsugineum Thhalv10022810m.g N 0.000
Thhalv10026007m.g Eutrema salsugineum Thhalv10026007m.g N 0.000
PDK_20s1365351g001 Phoenix dactylifera PDK_20s1365351g001 N 0.000
GSMUA_Achr7G03840_001 Musa acuminata GSMUA_Achr7G03840_001 N 0.000
BZIP23 Arabidopsis thaliana AT2G16770 N 0.000
BZIP19 Arabidopsis thaliana AT4G35040 N 0.000
BGIOSGA034759 Oryza indica BGIOSGA034759 N 0.000
Bo1g006780 Brassica oleracea Bo1g006780 N 0.000
Bo3g091670 Brassica oleracea Bo3g091670 N 0.000
Bo3g167300 Brassica oleracea Bo3g167300 N 0.000
Bo9g024230 Brassica oleracea Bo9g024230 N 0.000
Bra011580 Brassica rapa Bra011580 N 0.000
Bra013048 Brassica rapa Bra013048 N 0.000
Bra034668 Brassica rapa Bra034668 N 0.000
BRADI2G21197 Brachypodium distachyon BRADI2G21197 N 0.000
GLYMA11G11540 Glycine max GLYMA11G11540 N 0.000
GLYMA12G03690 Glycine max GLYMA12G03690 N 0.000
GRMZM2G033230 Zea mays GRMZM2G033230 N 0.000
GSMUA_Achr4G10150_001 Musa acuminata GSMUA_Achr4G10150_001 N 0.000
AMTR_s00152p00031760 Amborella trichopoda AMTR_s00152p00031760 N 0.000
OBART11G02390 Oryza barthii OBART11G02390 N 0.000
OS11G0139500 Oryza sativa OS11G0139500 N 0.000
PGSC0003DMG400011944 Solanum tuberosum PGSC0003DMG400011944 N 0.000
PGSC0003DMG401006188 Solanum tuberosum PGSC0003DMG401006188 N 0.000
POPTR_0009s13730 Populus trichocarpa POPTR_0009s13730 N 0.000
PRUPE_ppa009913mg Prunus persica PRUPE_ppa009913mg N 0.000
Sb03g037300 Sorghum bicolor Sb03g037300 N 0.000
bZIP23 Arabidopsis lyrata scaffold_303970.1 N 0.000
bZIP19 Arabidopsis lyrata scaffold_700623.1 N 0.000
SELMODRAFT_409920 Selaginella moellendorffii SELMODRAFT_409920 N 0.000
SELMODRAFT_414462 Selaginella moellendorffii SELMODRAFT_414462 N 0.000
Solyc01g111580.2 Solanum lycopersicum Solyc01g111580.2 N 0.000
VIT_03s0038g02420 Vitis vinifera VIT_03s0038g02420 N 0.000
Ca_24168 Cicer arietinum Ca_24168 N 0.000