SELMODRAFT_28625 (Selaginella moellendorffii)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03110 (SBP) IPR004333 SELMODRAFT_28625 T323022_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK06791.1
M02482_2.00 		Cannabis sativa
NNGTACGRN
NYCGTACNN		 PBM
Weirauch et al.(2014)
pTH9583 		0.944 0.743
SPL12
M02475_2.00 		Arabidopsis thaliana
NGTACGDN
NHCGTACN		 PBM
Weirauch et al.(2014)
pTH7500 		0.944 0.770
estExt_fgenesh1_pg.C_1940033
M02479_2.00 		Physcomitrella patens
NNGTACGDH
DHCGTACNN		 PBM
Weirauch et al.(2014)
pTH8664 		0.944 0.797
SPL5
M02474_2.00 		Arabidopsis thaliana
NNGTACGDN
NHCGTACNN		 PBM
Weirauch et al.(2014)
pTH7385 		0.938 0.689
SPL5
M07261_2.00 		Arabidopsis thaliana
NDNYGTACGGAH
DTCCGTACRNHN		 Dap-seq
OMalley et al.(2016)
SPL5_col_a 		0.938 0.689
SPL5
M07262_2.00 		Arabidopsis thaliana
NBGTACGGWH
DWCCGTACVN		 Dap-seq
OMalley et al.(2016)
SPL5_colamp_a 		0.938 0.689
SPL1
M00887_2.00 		Arabidopsis thaliana
NGTACGGHN
NDCCGTACN		 PBM
Franco-Zorrilla et al.(2014)
SPL1 		0.926 0.743
SPL1
M07259_2.00 		Arabidopsis thaliana
NNNBGTACGGW
WCCGTACVNNN		 Dap-seq
OMalley et al.(2016)
SPL1_col_a 		0.926 0.743
SPL1
M07260_2.00 		Arabidopsis thaliana
NNGTACGKWH
DWMCGTACNN		 Dap-seq
OMalley et al.(2016)
SPL1_colamp_a 		0.926 0.743
SPL14
M02470_2.00 		Arabidopsis thaliana
NNNRTACNN
NNGTAYNNN		 PBM
Weirauch et al.(2014)
pTH8191 		0.925 0.757
SPL14
M07253_2.00 		Arabidopsis thaliana
NNNBGTACGGW
WCCGTACVNNN		 Dap-seq
OMalley et al.(2016)
SPL14_col_a 		0.925 0.757
SPL14
M11270_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$SPL14_01 		0.925 0.757
POPTR_0002s00440
M02477_2.00 		Populus trichocarpa
NGTACGG
CCGTACN		 PBM
Weirauch et al.(2014)
pTH9280 		0.923 0.743
SPL4
M02472_2.00 		Arabidopsis thaliana
NRTACDDNN
NNHHGTAYN		 PBM
Weirauch et al.(2014)
pTH7408 		0.919 0.689
PK22320.1
M02483_2.00 		Cannabis sativa
NNGTACGGNN
NNCCGTACNN		 PBM
Weirauch et al.(2014)
pTH9723 		0.919 0.689
PRUPE_ppa000682mg
M02478_2.00 		Prunus persica
NNNNGTACGD
HCGTACNNNN		 PBM
Weirauch et al.(2014)
pTH9281 		0.916 0.757
AT1G76580
M02473_2.00 		Arabidopsis thaliana
NNNRTAYNNN
NNNRTAYNNN		 PBM
Weirauch et al.(2014)
pTH8668 		0.915 0.743
SPL3
M07255_2.00 		Arabidopsis thaliana
NGTACGGA
TCCGTACN		 Dap-seq
OMalley et al.(2016)
SPL3_col_a 		0.894 0.676
SPL3
M07256_2.00 		Arabidopsis thaliana
NDNTGTACGGAHN
NDTCCGTACANHN		 Dap-seq
OMalley et al.(2016)
SPL3_colamp_a 		0.894 0.676
SPL3
M02715_2.00 		Arabidopsis thaliana
DDDDDNGTACGKHHHH
DDDDMCGTACNHHHHH		 SELEX
Mathelier et al.(2014)
MA0577.1 		0.894 0.676
For this family, TFs with SR scores > 0.885 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EFJ34064 SBP 10 83

Links

Other SBP family TFs
Other Selaginella moellendorffii TFs

331 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cebpd Mus musculus BAE29047.1 D
Cebpd Rattus norvegicus ENSRNOG00000050869 D
CEBPD Homo sapiens ENSG00000221869 D
ENSSTOG00000021236 Ictidomys tridecemlineatus ENSSTOG00000021236 I
ENSOCUG00000025135 Oryctolagus cuniculus ENSOCUG00000025135 I
ENSONIG00000021429 Oreochromis niloticus ENSONIG00000021429 I
ENSPANG00000024953 Papio anubis ENSPANG00000024953 I
ENSPFOG00000020361 Poecilia formosa ENSPFOG00000020361 I
ENSPPYG00000018572 Pongo abelii ENSPPYG00000018572 I
CEBPD Pan troglodytes ENSPTRG00000042020 I
ENSSSCG00000006276 Sus scrofa ENSSSCG00000006276 I
ENSOANG00000007261 Ornithorhynchus anatinus ENSOANG00000007261 I
CEBPD Taeniopygia guttata ENSTGUG00000010839 I
cebpd Tetraodon nigroviridis ENSTNIG00000000222 I
ENSXMAG00000019437 Xiphophorus maculatus ENSXMAG00000019437 I
Cmyd_10014862 Chelonia mydas Cmyd_10014862 I
Pvit_15371 Pogona vitticeps Pvit_15371 I
cebpd.L Xenopus laevis XB-GENE-17330367 I
cebpd Xenopus tropicalis XB-GENE-853588 I
cebpd.S Xenopus laevis XB-GENE-866497 I
cebpd Gasterosteus aculeatus ENSGACG00000017927 I
CEBPD Anolis carolinensis ENSACAG00000012009 I
ENSAMXG00000025594 Astyanax mexicanus ENSAMXG00000025594 I
ENSAPLG00000002650 Anas platyrhynchos ENSAPLG00000002650 I
CEBPD Callithrix jacchus ENSCJAG00000013678 I
ENSCPOG00000025482 Cavia porcellus ENSCPOG00000025482 I
cebpd Danio rerio ENSDARG00000087303 I
CEBPD Dasypus novemcinctus ENSDNOG00000025666 I
ENSFALG00000014184 Ficedula albicollis ENSFALG00000014184 I
ENSOARG00000011169 Ovis aries ENSOARG00000011169 I
CEBPD Gorilla gorilla ENSGGOG00000008077 I
ENSGMOG00000002585 Gadus morhua ENSGMOG00000002585 I
ENSLACG00000015084 Latimeria chalumnae ENSLACG00000015084 I
ENSLOCG00000017816 Lepisosteus oculatus ENSLOCG00000017816 I
CEBPD Macaca mulatta ENSMMUG00000013151 I
CEBPD Monodelphis domestica ENSMODG00000010525 I
ENSMPUG00000001146 Mustela putorius furo ENSMPUG00000001146 I