Bostr.10273s0456 (Boechera stricta)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03110 (SBP) IPR004333 Bostr.10273s0456 T323380_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.10273s0456.1.p SBP 131 205
Bostr.10273s0456.2.p SBP 131 205

Links

Other SBP family TFs
Other Boechera stricta TFs

125 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00047p00197010 Amborella trichopoda AMTR_s00047p00197010 I 0.914
SPL6 Arabidopsis thaliana AT1G69170 I 0.956
BGIOSGA016888 Oryza indica BGIOSGA016888 I 0.898
BGIOSGA024253 Oryza indica BGIOSGA024253 I 0.920
Bo2g062840 Brassica oleracea Bo2g062840 I 0.951
Bra038324 Brassica rapa Bra038324 I 0.953
F775_02791 Aegilops tauschii F775_02791 I 0.899
fgenesh1_pg.C_scaffold_2001253 Arabidopsis lyrata fgenesh1_pg.C_scaffold_2001253 I 0.961
GLYMA0005S50 Glycine max GLYMA0005S50 I 0.920
GLYMA01G08056 Glycine max GLYMA01G08056 I 0.951
GLYMA02G13371 Glycine max GLYMA02G13371 I 0.951
GLYMA04G32002 Glycine max GLYMA04G32002 I 0.920
GLYMA17G08840 Glycine max GLYMA17G08840 I 0.920
GRMZM2G098557 Zea mays GRMZM2G098557 I 0.905
GRMZM2G148467 Zea mays GRMZM2G148467 I 0.889
GRMZM2G169270 Zea mays GRMZM2G169270 I 0.905
LPERR04G17030 Leersia perrieri LPERR04G17030 I 0.889
LPERR11G11330 Leersia perrieri LPERR11G11330 I 0.929
MLOC_69667 Hordeum vulgare MLOC_69667 I 0.899
MTR_2g461920 Medicago truncatula MTR_2g461920 I 0.920
MTR_4g109770 Medicago truncatula MTR_4g109770 I 0.920
MTR_5g046670 Medicago truncatula MTR_5g046670 I 0.932
MTR_7g028740 Medicago truncatula MTR_7g028740 I 0.905
OB04G27960 Oryza brachyantha OB04G27960 I 0.898
OBART04G20940 Oryza barthii OBART04G20940 I 0.898
OBART07G15570 Oryza barthii OBART07G15570 I 0.920
OGLUM04G20870 Oryza glumaepatula OGLUM04G20870 I 0.898
OGLUM07G15250 Oryza glumaepatula OGLUM07G15250 I 0.920
OMERI04G17360 Oryza meridionalis OMERI04G17360 I 0.898
OMERI07G12270 Oryza meridionalis OMERI07G12270 I 0.920
ONIVA04G19190 Oryza nivara ONIVA04G19190 I 0.898
ONIVA07G14170 Oryza nivara ONIVA07G14170 I 0.920
OPUNC04G18620 Oryza punctata OPUNC04G18620 I 0.898
ORGLA04G0180000 Oryza glaberrima ORGLA04G0180000 I 0.898
ORGLA11G0121600 Oryza glaberrima ORGLA11G0121600 I 0.889
ORUFI04G22540 Oryza rufipogon ORUFI04G22540 I 0.898
ORUFI07G16070 Oryza rufipogon ORUFI07G16070 I 0.920
SPL7 Oryza sativa OS04G0551500 I 0.898
SPL19 Oryza sativa OS11G0496600 I 0.889
PGSC0003DMG400023260 Solanum tuberosum PGSC0003DMG400023260 I 0.896
PGSC0003DMG400024527 Solanum tuberosum PGSC0003DMG400024527 I 0.912
POPTR_0008s09750 Populus trichocarpa POPTR_0008s09750 I 0.915
POPTR_0010s16400 Populus trichocarpa POPTR_0010s16400 I 0.921
POPTR_0015s07140 Populus trichocarpa POPTR_0015s07140 I 0.915
PRUPE_ppa003644mg Prunus persica PRUPE_ppa003644mg I 0.921
PRUPE_ppa017695mg Prunus persica PRUPE_ppa017695mg I 0.962
Sb07g027420 Sorghum bicolor Sb07g027420 I 0.905
Si010262m.g Setaria italica Si010262m.g I 0.895
Si013151m.g Setaria italica Si013151m.g I 0.898
Si032170m.g Setaria italica Si032170m.g I 0.921
Solyc02g077920.2 Solanum lycopersicum Solyc02g077920.2 I 0.923
Solyc03g114850.2 Solanum lycopersicum Solyc03g114850.2 I 0.912
Solyc12g038520.1 Solanum lycopersicum Solyc12g038520.1 I 0.896
TCM_011483 Theobroma cacao TCM_011483 I 0.915
TCM_014330 Theobroma cacao TCM_014330 I 0.920
Traes_2AL_B45245746 Triticum aestivum Traes_2AL_B45245746 I 0.899
Traes_2BL_69E6AB6D1 Triticum aestivum Traes_2BL_69E6AB6D1 I 0.899
VIT_01s0011g00130 Vitis vinifera VIT_01s0011g00130 I 0.927
SPL3 Vitis vinifera VIT_10s0003g00050 I 0.898
VIT_17s0000g05020 Vitis vinifera VIT_17s0000g05020 I 0.921
Ca_19449 Cicer arietinum Ca_19449 I 0.920
Ca_24655 Cicer arietinum Ca_24655 I 0.951
Cla004156 Citrullus lanatus Cla004156 I 0.915
Cla018827 Citrullus lanatus Cla018827 I 0.915
Cla019331 Citrullus lanatus Cla019331 I 0.921
Cla021411 Citrullus lanatus Cla021411 I 0.907
Pm025028 Prunus mume Pm025028 I 0.915
Pm030597 Prunus mume Pm030597 I 0.962
30138.m003942 Ricinus communis 30138.m003942 I 0.919
30174.m009082 Ricinus communis 30174.m009082 I 0.919
cassava39122.m1 Manihot esculenta cassava39122.m1 I 0.913
cassava43385.valid.m1 Manihot esculenta cassava43385.valid.m1 I 0.911
cassava7440.valid.m1 Manihot esculenta cassava7440.valid.m1 I 0.905
Cucsa.054050 Cucumis sativus Cucsa.054050 I 0.915
Cucsa.113410 Cucumis sativus Cucsa.113410 I 0.921
Cucsa.198630 Cucumis sativus Cucsa.198630 I 0.920
Cucsa.259800 Cucumis sativus Cucsa.259800 I 0.899
Aquca_002_00889 Aquilegia coerulea Aquca_002_00889 I 0.907
Cagra.0537s0003 Capsella grandiflora Cagra.0537s0003 I 0.977
Carubv10020369m.g Capsella rubella Carubv10020369m.g I 0.977
Ciclev10009879m.g Citrus clementina Ciclev10009879m.g I 0.886
Ciclev10019546m.g Citrus clementina Ciclev10019546m.g I 0.895
Ciclev10031270m.g Citrus clementina Ciclev10031270m.g I 0.945
Eucgr.B00631 Eucalyptus grandis Eucgr.B00631 I 0.921
Eucgr.D02505 Eucalyptus grandis Eucgr.D02505 I 0.886
evm.TU.supercontig_2783.1 Carica papaya evm.TU.supercontig_2783.1 I 0.929
gene01338-v1.0-hybrid Fragaria vesca gene01338-v1.0-hybrid I 0.895
gene04565-v1.0-hybrid Fragaria vesca gene04565-v1.0-hybrid I 0.960
gene26117-v1.0-hybrid Fragaria vesca gene26117-v1.0-hybrid I 0.921
Gorai.003G102800 Gossypium raimondii Gorai.003G102800 I 0.921
Gorai.008G107300 Gossypium raimondii Gorai.008G107300 I 0.926
Lus10000643.g Linum usitatissimum Lus10000643.g I 0.929
Lus10007984.g Linum usitatissimum Lus10007984.g I 0.912
Lus10021141.g Linum usitatissimum Lus10021141.g I 0.917
Lus10036812.g Linum usitatissimum Lus10036812.g I 0.922
MDP0000119458 Malus domestica MDP0000119458 I 0.942
MDP0000146640 Malus domestica MDP0000146640 I 0.919
MDP0000171877 Malus domestica MDP0000171877 I 0.956
MDP0000193702 Malus domestica MDP0000193702 I 0.942
MDP0000246046 Malus domestica MDP0000246046 I 0.956
MDP0000589558 Malus domestica MDP0000589558 I 0.945
MDP0000778465 Malus domestica MDP0000778465 I 0.919
orange1.1g008680m.g Citrus sinensis orange1.1g008680m.g I 0.895
orange1.1g009653m.g Citrus sinensis orange1.1g009653m.g I 0.945
orange1.1g032937m.g Citrus sinensis orange1.1g032937m.g I 0.886
Pavir.Fb01917 Panicum virgatum Pavir.Fb01917 I 0.898
SapurV1A.0072s0340 Salix purpurea SapurV1A.0072s0340 I 0.921
SapurV1A.0176s0470 Salix purpurea SapurV1A.0176s0470 I 0.934
SapurV1A.0329s0040 Salix purpurea SapurV1A.0329s0040 I 0.952
Thhalv10018638m.g Eutrema salsugineum Thhalv10018638m.g I 0.977
PK03565.1 Cannabis sativa PK03565.1 I 0.932
PK17790.1 Cannabis sativa PK17790.1 I 0.914
Bo6g108620 Brassica oleracea Bo6g108620 N 0.929
Bra004363 Brassica rapa Bra004363 N 0.930
OPUNC07G14360 Oryza punctata OPUNC07G14360 N 0.936
POPTR_0018s14680 Populus trichocarpa POPTR_0018s14680 N 0.886
SELMODRAFT_28634 Selaginella moellendorffii SELMODRAFT_28634 N 0.946
SELMODRAFT_28635 Selaginella moellendorffii SELMODRAFT_28635 N 0.946
SPL2 Vitis vinifera VIT_11s0065g00170 N 0.890
VIT_14s0068g01780 Vitis vinifera VIT_14s0068g01780 N 0.902
Lus10021614.g Linum usitatissimum Lus10021614.g N 0.901
MDP0000142582 Malus domestica MDP0000142582 N 0.937
SapurV1A.0430s0160 Salix purpurea SapurV1A.0430s0160 N 0.886
PK14243.1 Cannabis sativa PK14243.1 N 0.897