Pavir.Ea03909 (Panicum virgatum)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03110 (SBP) IPR004333 Pavir.Ea03909 T323626_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SPL13A
M07265_2.00 		Arabidopsis thaliana
DNYGTACGGWH
DWCCGTACRNH		 Dap-seq
OMalley et al.(2016)
SPL13_col_a 		0.946 0.747
For this family, TFs with SR scores > 0.885 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ea03909.1.p SBP 86 160

Links

Other SBP family TFs
Other Panicum virgatum TFs

279 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
HSFY2 Homo sapiens ENSG00000169953 D 0.000
HSFY1 Homo sapiens ENSG00000172468 D 0.000
ENSOANG00000001091 Ornithorhynchus anatinus ENSOANG00000001091 I 0.000
Hsfy2 Rattus norvegicus ENSRNOG00000038569 I 0.000
ENSPPYG00000020808 Pongo abelii ENSPPYG00000020808 I 0.000
ENSPANG00000004032 Papio anubis ENSPANG00000004032 I 0.000
ENSOGAG00000026441 Otolemur garnettii ENSOGAG00000026441 I 0.000
ENSOANG00000028803 Ornithorhynchus anatinus ENSOANG00000028803 I 0.000
ENSOANG00000012192 Ornithorhynchus anatinus ENSOANG00000012192 I 0.000
ENSSSCG00000012734 Sus scrofa ENSSSCG00000012734 I 0.000
ENSNLEG00000013483 Nomascus leucogenys ENSNLEG00000013483 I 0.000
Hsfy2 Mus musculus ENSMUSG00000045336 I 0.000
ENSMODG00000028107 Monodelphis domestica ENSMODG00000028107 I 0.000
ENSMODG00000027398 Monodelphis domestica ENSMODG00000027398 I 0.000
ENSMMUG00000002887 Macaca mulatta ENSMMUG00000002887 I 0.000
ENSMLUG00000024907 Myotis lucifugus ENSMLUG00000024907 I 0.000
ENSMLUG00000015387 Myotis lucifugus ENSMLUG00000015387 I 0.000
ENSMGAG00000014469 Meleagris gallopavo ENSMGAG00000014469 I 0.000
Aan_R010039 Calypte anna Aan_R010039 I 0.000
DICVIV_13476 Dictyocaulus viviparus DICVIV_13476 I 0.000
Pvit_14501 Pogona vitticeps Pvit_14501 I 0.000
Ogr08578 Ophisaurus gracilis Ogr08578 I 0.000
Gfo_R015012 Geospiza fortis Gfo_R015012 I 0.000
ENSP00000410851-D3 Bos grunniens ENSP00000410851-D3 I 0.000
ENSP00000359444 Macaca fascicularis ENSP00000359444 I 0.000
Cmyd_10018130 Chelonia mydas Cmyd_10018130 I 0.000
Afo_R012751 Aptenodytes forsteri Afo_R012751 I 0.000
ENSAMEG00000009347 Ailuropoda melanoleuca ENSAMEG00000009347 I 0.000
ENSVPAG00000010189 Vicugna pacos ENSVPAG00000010189 I 0.000
ENSVPAG00000006426 Vicugna pacos ENSVPAG00000006426 I 0.000
ENSVPAG00000004668 Vicugna pacos ENSVPAG00000004668 I 0.000
ENSVPAG00000004400 Vicugna pacos ENSVPAG00000004400 I 0.000
ENSVPAG00000003263 Vicugna pacos ENSVPAG00000003263 I 0.000
ENSTGUG00000006066 Taeniopygia guttata ENSTGUG00000006066 I 0.000
ENSTGUG00000006065 Taeniopygia guttata ENSTGUG00000006065 I 0.000
ENSTBEG00000002283 Tupaia belangeri ENSTBEG00000002283 I 0.000
ENSCSAG00000007182 Chlorocebus sabaeus ENSCSAG00000007182 I 0.000
ENSECAG00000009495 Equus caballus ENSECAG00000009495 I 0.000
ENSMGAG00000014467 Meleagris gallopavo ENSMGAG00000014467 I 0.000
ENSECAG00000008677 Equus caballus ENSECAG00000008677 I 0.000
ENSECAG00000000093 Equus caballus ENSECAG00000000093 I 0.000
ENSDNOG00000045058 Dasypus novemcinctus ENSDNOG00000045058 I 0.000
ENSDNOG00000043873 Dasypus novemcinctus ENSDNOG00000043873 I 0.000
ENSDNOG00000031164 Dasypus novemcinctus ENSDNOG00000031164 I 0.000
ENSCSAG00000018308 Chlorocebus sabaeus ENSCSAG00000018308 I 0.000
ENSECAG00000008708 Equus caballus ENSECAG00000008708 I 0.000
ENSCJAG00000004097 Callithrix jacchus ENSCJAG00000004097 I 0.000
ENSCAFG00000031919 Canis familiaris ENSCAFG00000031919 I 0.000
ENSCAFG00000025411 Canis familiaris ENSCAFG00000025411 I 0.000
ENSCAFG00000023024 Canis familiaris ENSCAFG00000023024 I 0.000
ENSBTAG00000046306 Bos taurus ENSBTAG00000046306 I 0.000
ENSBTAG00000045938 Bos taurus ENSBTAG00000045938 I 0.000
ENSAPLG00000009652 Anas platyrhynchos ENSAPLG00000009652 I 0.000
ENSACAG00000008631 Anolis carolinensis ENSACAG00000008631 I 0.000
ENSLACG00000012431 Latimeria chalumnae ENSLACG00000012431 I 0.000
ENSMGAG00000005814 Meleagris gallopavo ENSMGAG00000005814 I 0.000
ENSMGAG00000003672 Meleagris gallopavo ENSMGAG00000003672 I 0.000
ENSMEUG00000003908 Macropus eugenii ENSMEUG00000003908 I 0.000
ENSLOCG00000014483 Lepisosteus oculatus ENSLOCG00000014483 I 0.000
ENSLAFG00000031072 Loxodonta africana ENSLAFG00000031072 I 0.000
ENSLAFG00000016976 Loxodonta africana ENSLAFG00000016976 I 0.000
ENSLAFG00000010861 Loxodonta africana ENSLAFG00000010861 I 0.000
ENSGGOG00000022734 Gorilla gorilla ENSGGOG00000022734 I 0.000
ENSGALG00000028720 Gallus gallus ENSGALG00000028720 I 0.000
ENSGALG00000027212 Gallus gallus ENSGALG00000027212 I 0.000
HSFX2 Homo sapiens ENSG00000268738 I 0.000
HSFX1 Homo sapiens ENSG00000171116 I 0.000
ENSFCAG00000025614 Felis catus ENSFCAG00000025614 I 0.000
ENSMGAG00000014234 Meleagris gallopavo ENSMGAG00000014234 N 0.000
XP_002162063.1 Hydra magnipapillata XP_002162063.1 N 0.000
XP_002167149.1 Hydra magnipapillata XP_002167149.1 N 0.000
ENSMGAG00000014478 Meleagris gallopavo ENSMGAG00000014478 N 0.000
ENSMICG00000013064 Microcebus murinus ENSMICG00000013064 N 0.000
ENSP00000306549-D3 Bos grunniens ENSP00000306549-D3 N 0.000
ENSTTRG00000003386 Tursiops truncatus ENSTTRG00000003386 N 0.000
ENSTTRG00000000641 Tursiops truncatus ENSTTRG00000000641 N 0.000
ENSECAG00000009040 Equus caballus ENSECAG00000009040 N 0.000