Thhalv10007882m.g (Eutrema salsugineum)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03110 (SBP) IPR004333 Thhalv10007882m.g T323684_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SPL11
M02471_2.00 		Arabidopsis thaliana
NNNHGTACGGWN
NWCCGTACDNNN		 PBM
Weirauch et al.(2014)
pTH9392 		0.971 0.947
SPL11
M07254_2.00 		Arabidopsis thaliana
HTGTACTDDHH
DDHHAGTACAD		 Dap-seq
OMalley et al.(2016)
SPL11_col100_a 		0.971 0.947
SPL10
M01084_2.00 		Arabidopsis thaliana
NNGTACGRHN
NDYCGTACNN		 PBM
Sullivan et al.(2014)
pTH9749 		0.960 0.947
For this family, TFs with SR scores > 0.885 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10007882m SBP 176 250
Thhalv10007887m SBP 176 250

Links

Other SBP family TFs
Other Eutrema salsugineum TFs

25 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACUA026250 Anopheles culicifacies ACUA026250 N
ASTEI05694 Anopheles stephensi ASTEI05694 N
ASIS016247 Anopheles sinensis ASIS016247 N
AQUA000510 Anopheles quadriannulatus AQUA000510 N
AMIN003455 Anopheles minimus AMIN003455 N
AMEC021697 Anopheles melas AMEC021697 N
AFAF010615 Anopheles farauti AFAF010615 N
AEPI006067 Anopheles epiroticus AEPI006067 N
ADIR010454 Anopheles dirus ADIR010454 N
CpipJ_CPIJ006343 Culex pipiens CpipJ_CPIJ006343 N
ACOM034425 Anopheles coluzzii ACOM034425 N
ACHR001012 Anopheles christyi ACHR001012 N
AATE013439 Anopheles atroparvus AATE013439 N
AARA002089 Anopheles arabiensis AARA002089 N
CPIJ006343 Culex quinquefasciatus CPIJ006343 N
AGAP001646 Anopheles gambiae AGAP001646 N
ADAC010121 Anopheles darlingi ADAC010121 N
AAEL012388 Aedes aegypti AAEL012388 N