CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GSMUA_Achr11G08010_001
(
Musa acuminata
)
Sigma 70
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF04542 (Sigma70_r2)
IPR007627
GSMUA_Achr11G08010_001
T323857_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GSMUA_Achr11P08010_001
Sigma 70
220
290
LAMSNVRLVMSIAQKYDNMGTAMADLIQGGLIGLLRGIEKFDASKGFKISTYVYWWIRQGVTRTLFKNSRT
Links
Other
Sigma 70
family TFs
Other
Musa acuminata
TFs
74 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
HMO1
Saccharomyces cerevisiae
YDR174W
D
TBLA_0A01170
Tetrapisispora blattae
TBLA_0A01170
I
SAKL0H14234g
Lachancea kluyveri
SAKL0H14234g
I
KLTH0F09020g
Kluyveromyces thermotolerans
KLTH0F09020g
I
4397_YDR174W
Saccharomyces paradoxus
4397_YDR174W
I
3875_YDR174W
Saccharomyces mikatae
3875_YDR174W
I
Scas_Contig682.13
Saccharomyces castellii
Scas_Contig682.13
I
ZYRO0C03718g
Zygosaccharomyces rouxii
ZYRO0C03718g
I
ZBAI_09581
Zygosaccharomyces bailii
ZBAI_09581
I
ZBAI_01315
Zygosaccharomyces bailii
ZBAI_01315
I
TPHA_0C02460
Tetrapisispora phaffii
TPHA_0C02460
I
TDEL_0F04960
Torulaspora delbrueckii
TDEL_0F04960
I
TBLA_0H01020
Tetrapisispora blattae
TBLA_0H01020
I
AGOS_AGL141W
Ashbya gossypii
AGOS_AGL141W
I
SU7_2586
Saccharomyces arboricola
SU7_2586
I
SKUD_149803
Saccharomyces kudriavzevii
SKUD_149803
I
NDAI_0A01190
Naumovozyma dairenensis
NDAI_0A01190
I
NCAS_0B03190
Naumovozyma castellii
NCAS_0B03190
I
LALA0_S03e03444g
Lachancea lanzarotensis
LALA0_S03e03444g
I
Kpol_1024p24
Vanderwaltozyma polyspora
Kpol_1024p24
I
KNAG_0A04840
Kazachstania naganishii
KNAG_0A04840
I
KLTH0F09020g
Lachancea thermotolerans
KLTH0F09020g
I
Ecym_4194
Eremothecium cymbalariae
Ecym_4194
I
CAGL0E00737g
Candida glabrata
CAGL0E00737g
I
BN7_2978
Wickerhamomyces ciferrii
BN7_2978
I