OMERI08G04040 (Oryza meridionalis)
Sigma 70

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04542 (Sigma70_r2) IPR007627 OMERI08G04040 T323909_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
OMERI08G04040.1 Sigma 70 286 356
OMERI08G04040.2 Sigma 70 286 356
OMERI08G04040.3 Sigma 70 179 249
OMERI08G04040.4 Sigma 70 286 356

Links

Other Sigma 70 family TFs
Other Oryza meridionalis TFs

74 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ORUFI11G03300 Oryza rufipogon ORUFI11G03300 N
Pavir.J34096 Panicum virgatum Pavir.J34096 N
Pavir.Ca00148 Panicum virgatum Pavir.Ca00148 N
Gorai.009G086200 Gossypium raimondii Gorai.009G086200 N
Cucsa.365420 Cucumis sativus Cucsa.365420 N
Ca_16486 Cicer arietinum Ca_16486 N
Traes_4DS_0521C8ABF Triticum aestivum Traes_4DS_0521C8ABF N
Traes_4BS_B7A8F8CD8 Triticum aestivum Traes_4BS_B7A8F8CD8 N
Traes_4AL_5E7F93445 Triticum aestivum Traes_4AL_5E7F93445 N
Si014861m.g Setaria italica Si014861m.g N
Sb08g003260 Sorghum bicolor Sb08g003260 N
Sb05g003240 Sorghum bicolor Sb05g003240 N
TGAL4 Oryza sativa OS11G0152700 N
BGIOSGA034480 Oryza indica BGIOSGA034480 N
ORGLA11G0031300 Oryza glaberrima ORGLA11G0031300 N
OPUNC11G03040 Oryza punctata OPUNC11G03040 N
ONIVA01G19020 Oryza nivara ONIVA01G19020 N
OMERI11G03130 Oryza meridionalis OMERI11G03130 N
OLONG_000706 Oryza longistaminata OLONG_000706 N
OGLUM11G03040 Oryza glumaepatula OGLUM11G03040 N
OBART11G03420 Oryza barthii OBART11G03420 N
OB11G12720 Oryza brachyantha OB11G12720 N
MLOC_17690 Hordeum vulgare MLOC_17690 N
LPERR11G02850 Leersia perrieri LPERR11G02850 N
GRMZM2G030877 Zea mays GRMZM2G030877 N
F775_05299 Aegilops tauschii F775_05299 N