CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ORGLA05G0241100
(
Oryza glaberrima
)
Sigma 70
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF04542 (Sigma70_r2)
IPR007627
ORGLA05G0241100
T323923_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ORGLA05G0241100.1
Sigma 70
327
393
TTEWLVKYIAKTYAGMGTAFEDLLQAGKMGVLNGAEKFDSQKGCKFSTYVKYWIRKAMLALLAENSG
Links
Other
Sigma 70
family TFs
Other
Oryza glaberrima
TFs
25 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ZNF358
Myotis lucifugus
ENSMLUG00000016024
N
ZNF358
Tursiops truncatus
ENSTTRG00000003872
N
ENSSTOG00000020033
Ictidomys tridecemlineatus
ENSSTOG00000020033
N
Zfp358
Rattus norvegicus
ENSRNOG00000000974
N
ZNF358
Pan troglodytes
ENSPTRG00000029154
N
ENSPPYG00000009476
Pongo abelii
ENSPPYG00000009476
N
ENSPANG00000013776
Papio anubis
ENSPANG00000013776
N
ZNF358
Otolemur garnettii
ENSOGAG00000029525
N
ZNF358
Oryctolagus cuniculus
ENSOCUG00000011756
N
Zfp358
Mus musculus
ENSMUSG00000047264
N
ENSMMUG00000011388
Macaca mulatta
ENSMMUG00000011388
N
ZNF358
Bos taurus
ENSBTAG00000046837
N
ZNF358
Microcebus murinus
ENSMICG00000011673
N
ZNF358
Loxodonta africana
ENSLAFG00000012559
N
ZNF358
Gorilla gorilla
ENSGGOG00000010641
N
ZNF358
Homo sapiens
ENSG00000198816
N
ENSEEUG00000008172
Erinaceus europaeus
ENSEEUG00000008172
N
Zfp358
Dipodomys ordii
ENSDORG00000007745
N
ZNF358
Dasypus novemcinctus
ENSDNOG00000042842
N
ENSCSAG00000018826
Chlorocebus sabaeus
ENSCSAG00000018826
N
ZNF358
Cavia porcellus
ENSCPOG00000009724
N
ZNF358
Canis familiaris
ENSCAFG00000018229
N