ORUFI08G08440 (Oryza rufipogon)
Sigma 70

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04542 (Sigma70_r2) IPR007627 ORUFI08G08440 T323930_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
ORUFI08G08440.1 Sigma 70 353 423
ORUFI08G08440.2 Sigma 70 307 377

Links

Other Sigma 70 family TFs
Other Oryza rufipogon TFs

27 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ONIVA08G08070 Oryza nivara ONIVA08G08070 N 1.000
Pavir.Ib04452 Panicum virgatum Pavir.Ib04452 N 0.986
Pavir.Ia00050 Panicum virgatum Pavir.Ia00050 N 0.958
Pavir.Ha01929 Panicum virgatum Pavir.Ha01929 N 0.972
TRIUR3_06257 Triticum urartu TRIUR3_06257 N 0.930
Traes_5DL_8DC4CC983 Triticum aestivum Traes_5DL_8DC4CC983 N 0.930
Traes_5BL_B1F704307 Triticum aestivum Traes_5BL_B1F704307 N 0.930
Traes_4AL_A0565AC4C Triticum aestivum Traes_4AL_A0565AC4C N 0.930
Si034994m.g Setaria italica Si034994m.g N 0.986
Sb01g000390 Sorghum bicolor Sb01g000390 N 0.972
OS08G0242800 Oryza sativa OS08G0242800 N 1.000
ORGLA08G0064000 Oryza glaberrima ORGLA08G0064000 N 1.000
OPUNC08G07030 Oryza punctata OPUNC08G07030 N 0.986
BGIOSGA028267 Oryza indica BGIOSGA028267 N 1.000
OMERI03G18460 Oryza meridionalis OMERI03G18460 N 1.000
OLONG_007958 Oryza longistaminata OLONG_007958 N 1.000
OGLUM08G08160 Oryza glumaepatula OGLUM08G08160 N 1.000
OBART08G07320 Oryza barthii OBART08G07320 N 1.000
OB08G17050 Oryza brachyantha OB08G17050 N 0.986
MLOC_4725 Hordeum vulgare MLOC_4725 N 0.930
LPERR08G06520 Leersia perrieri LPERR08G06520 N 0.986
GSMUA_Achr4G30300_001 Musa acuminata GSMUA_Achr4G30300_001 N 0.730
GSMUA_Achr11G17050_001 Musa acuminata GSMUA_Achr11G17050_001 N 0.746
GRMZM2G144196 Zea mays GRMZM2G144196 N 0.972
F775_07378 Aegilops tauschii F775_07378 N 0.930
BRADI1G00750 Brachypodium distachyon BRADI1G00750 N 0.930