cassava13701.valid.m1 (Manihot esculenta)
Sigma 70

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04542 (Sigma70_r2) IPR007627 cassava13701.valid.m1 T324087_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava13701.valid.m1 Sigma 70 270 340

Links

Other Sigma 70 family TFs
Other Manihot esculenta TFs

74 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ONIVA04G08240 Oryza nivara ONIVA04G08240 N
Pavir.Gb01948 Panicum virgatum Pavir.Gb01948 N
TRIUR3_24820 Triticum urartu TRIUR3_24820 N
Traes_2DL_BB8506245 Triticum aestivum Traes_2DL_BB8506245 N
Si012575m.g Setaria italica Si012575m.g N
OS04G0386900 Oryza sativa OS04G0386900 N
ORUFI04G11550 Oryza rufipogon ORUFI04G11550 N
ORGLA04G0074500 Oryza glaberrima ORGLA04G0074500 N
ORGLA02G0343600 Oryza glaberrima ORGLA02G0343600 N
BGIOSGA015201 Oryza indica BGIOSGA015201 N
OMERI04G09500 Oryza meridionalis OMERI04G09500 N
OGLUM04G10060 Oryza glumaepatula OGLUM04G10060 N
OBART04G10380 Oryza barthii OBART04G10380 N
MLOC_48372 Hordeum vulgare MLOC_48372 N
LPERR04G06900 Leersia perrieri LPERR04G06900 N
GRMZM2G126194 Zea mays GRMZM2G126194 N
F775_23931 Aegilops tauschii F775_23931 N