CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SMUV_0000477801
(
Syphacia muris
)
SMAD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03165 (MH1)
IPR003619
SMUV_0000477801
T325900_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SMUV_0000477801-mRNA-1
SMAD
30
133
SKKAIESLMKKLQKHNKEALANLERALNSQGREKTECVTIPRSLDGRLQISHRKALPHVIYCRVYRWPDLQSHHELKSIDECKYCYESGQKDVCINPYHYKRVE
Links
Other
SMAD
family TFs
Other
Syphacia muris
TFs
39 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SMAD1
Ochotona princeps
ENSOPRG00000012775
I
0.724
NBR_0000522801
Nippostrongylus brasiliensis
NBR_0000522801
I
0.840
nLs.2.1.2.g02003
Litomosoides sigmodontis
nLs.2.1.2.g02003
N
0.883
L892_g4529
Steinernema scapterisci
L892_g4529
N
0.767
L893_g15060
Steinernema glaseri
L893_g15060
N
0.786
L898_g14583
Steinernema monticolum
L898_g14583
N
0.777
maker-nMf.1.1.scaf00076-augustus-gene-0.21
Meloidogyne floridensis
maker-nMf.1.1.scaf00076-augustus-gene-0.21
N
0.796
nAv.1.0.1.g05112
Acanthocheilonema viteae
nAv.1.0.1.g05112
N
0.883
NBR_0000271401
Nippostrongylus brasiliensis
NBR_0000271401
N
0.796
nDi.2.2.2.g00640
Dirofilaria immitis
nDi.2.2.2.g00640
N
0.778
NECAME_19535
Necator americanus
NECAME_19535
N
0.762
HCOI01543700
Haemonchus contortus
HCOI01543700
N
0.806
nOo.2.0.1.g00974
Onchocerca ochengi
nOo.2.0.1.g00974
N
0.883
OFLC_0000052301
Onchocerca flexuosa
OFLC_0000052301
N
0.883
PTRK_0000297300
Parastrongyloides trichosuri
PTRK_0000297300
N
0.806
RSKR_0000082500
Rhabditophanes kr3021
RSKR_0000082500
N
0.854
SPAL_0001290200
Strongyloides papillosus
SPAL_0001290200
N
0.806
SSTP_0000571600
Strongyloides stercoralis
SSTP_0000571600
N
0.806
SVE_0161800
Strongyloides venezuelensis
SVE_0161800
N
0.786
TCLT_0000791701
Thelazia callipaeda
TCLT_0000791701
N
0.845
ASU_06962
Ascaris suum
ASU_06962
N
0.864
Bm7459
Brugia malayi
Bm7459
N
0.883
CBG06922
Caenorhabditis briggsae
CBG06922
N
0.825
CRE15772
Caenorhabditis remanei
CRE15772
N
0.825
LOAG_01471
Loa loa
LOAG_01471
N
0.883
Ppa-sma-2
Pristionchus pacificus
PPA15247
N
0.755
sma-2
Caenorhabditis elegans
WBGene00004856
N
0.825
WBGene00245189
Onchocerca volvulus
WBGene00245189
N
0.883
Minc06478
Meloidogyne incognita
Minc06478
N
0.806
ANCDUO_02619
Ancylostoma duodenale
ANCDUO_02619
N
0.721
L596_g26009
Steinernema carpocapsae
L596_g26009
N
0.777
BTMF_0000953701
Brugia timori
BTMF_0000953701
N
0.883
BXY_1512700
Bursaphelenchus xylophilus
BXY_1512700
N
0.786
DME_0000390001
Dracunculus medinensis
DME_0000390001
N
0.854
EEL_0000068901
Elaeophora elaphi
EEL_0000068901
N
0.883
EVEC_0000636701
Enterobius vermicularis
EVEC_0000636701
N
0.913
Hba_13214
Heterorhabditis bacteriophora
Hba_13214
N
0.768
HCOI00251100
Haemonchus contortus
HCOI00251100
N
0.806
WUBG_02400
Wuchereria bancrofti
WUBG_02400
N
0.883