CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CY34DRAFT_28710
(
Suillus luteus
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
CY34DRAFT_28710
T327281_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ROX1
M00070_2.00
Saccharomyces cerevisiae
NRAACAATWNN
NNWATTGTTYN
PBM
Badis et al.(2008)
ROX1_2099
0.447
0.435
ROX1
M07498_2.00
Saccharomyces cerevisiae
YYHATTGTTYTS
SARAACAATDRR
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0371.1
0.447
0.435
ROX1
M08607_2.00
Saccharomyces cerevisiae
BYATTGTN
NACAATRV
Misc
DeBoer et al.(2011)
YPR065W_1396
0.447
0.435
ROX1
M11346_2.00
Saccharomyces cerevisiae
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$ROX1_Q6_01
0.447
0.435
ROX1
M11347_2.00
Saccharomyces cerevisiae
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$ROX1_Q6
0.447
0.435
ste11
M11342_2.00
Schizosaccharomyces pombe
DWNTTTCTTTGTTHNHWW
WWDNDAACAAAGAAANWH
Transfac
Matys et al.(2006)
F$STE11_01
0.442
0.348
ste11
M11343_2.00
Schizosaccharomyces pombe
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$STE11_02
0.442
0.348
cic
M06452_2.00
Drosophila melanogaster
YYCATTSA
TSAATGRR
B1H
Zhu et al.(2011)
cic_SANGER_5_FBgn0028386
0.434
0.333
Cic
M00195_2.00
Mus musculus
NNTGCTGABN
NVTCAGCANN
PBM
Badis et al.(2009)
Cic_3454
0.428
0.319
For this family, TFs with SR scores >
0.415
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KIK40639
Sox
2
71
IPRPRNAFILFRCDFVQQKKIPGHVESDHRNLSRIAGKIWRGMKKEQQKPWIDLALKEKERHAAMYPGYK
Links
Other
Sox
family TFs
Other
Suillus luteus
TFs
462 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PILCRDRAFT_823319
Piloderma croceum
PILCRDRAFT_823319
N
M422DRAFT_71920
Sphaerobolus stellatus
M422DRAFT_71920
N
Moror_825
Moniliophthora roreri
Moror_825
N
PaG_00960
Pseudozyma aphidis
PaG_00960
N
PAN0_024c6129
Pseudozyma antarctica
PAN0_024c6129
N
PAXRUDRAFT_821096
Paxillus rubicundulus
PAXRUDRAFT_821096
N
PFL1_03819
Pseudozyma flocculosa
PFL1_03819
N
PHACADRAFT_255607
Phanerochaete carnosa
PHACADRAFT_255607
N
PHLGIDRAFT_82021
Phlebiopsis gigantea
PHLGIDRAFT_82021
N
PHSY_007464
Pseudozyma hubeiensis
PHSY_007464
N
PIIN_03157
Piriformospora indica
PIIN_03157
N
M422DRAFT_180219
Sphaerobolus stellatus
M422DRAFT_180219
N
PLEOSDRAFT_1110570
Pleurotus ostreatus
PLEOSDRAFT_1110570
N
PSEUBRA_SCAF13g01932
Pseudozyma brasiliensis
PSEUBRA_SCAF13g01932
N
SCHCODRAFT_74719
Schizophyllum commune
SCHCODRAFT_74719
N
sr15132
Sporisorium reilianum
sr15132
N
UHOR_06369
Ustilago hordei
UHOR_06369
N
UM04242
Ustilago maydis
UM04242
N
V565_017120
Rhizoctonia solani
V565_017120
N
fgenesh1_pg.C_scaffold_1000144
Phanerochaete chrysosporium
fgenesh1_pg.C_scaffold_1000144
N
e_gw1.15.51.1
Tremella mesenterica
e_gw1.15.51.1
N
estExt_Genewise1.C_20637
Heterobasidion annosum
estExt_Genewise1.C_20637
N
GLOTRDRAFT_136812
Gloeophyllum trabeum
GLOTRDRAFT_136812
N
BN946_scf185014.g25
Trametes cinnabarina
BN946_scf185014.g25
N
BOTBODRAFT_155106
Botryobasidium botryosum
BOTBODRAFT_155106
N
CC1G_01048
Coprinopsis cinerea
CC1G_01048
N
CERSUDRAFT_82708
Ceriporiopsis subvermispora
CERSUDRAFT_82708
N
CY34DRAFT_800522
Suillus luteus
CY34DRAFT_800522
N
DACRYDRAFT_20007
Dacryopinax sp
DACRYDRAFT_20007
N
E5Q_03246
Mixia osmundae
E5Q_03246
N
FIBRA_08487
Fibroporia radiculosa
FIBRA_08487
N
FOMPIDRAFT_1025229
Fomitopsis pinicola
FOMPIDRAFT_1025229
N
GALMADRAFT_269832
Galerina marginata
GALMADRAFT_269832
N
A1Q1_01006
Trichosporon asahii
A1Q1_01006
N
GYMLUDRAFT_75242
Gymnopus luxurians
GYMLUDRAFT_75242
N
HETIRDRAFT_432523
Heterobasidion irregulare
HETIRDRAFT_432523
N
JAAARDRAFT_31927
Jaapia argillacea
JAAARDRAFT_31927
N
K437DRAFT_69739
Tilletiaria anomala
K437DRAFT_69739
N
LACBIDRAFT_305811
Laccaria bicolor
LACBIDRAFT_305811
N
M378DRAFT_187599
Amanita muscaria
M378DRAFT_187599
N
M404DRAFT_992985
Pisolithus tinctorius
M404DRAFT_992985
N
M408DRAFT_197963
Serendipita vermifera
M408DRAFT_197963
N
M413DRAFT_15049
Hebeloma cylindrosporum
M413DRAFT_15049
N