DAPPUDRAFT_306496 (Daphnia pulex)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 DAPPUDRAFT_306496 T327328_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
EFX87508 Sox 11 81
EFX87508 Sox 102 170

Links

Other Sox family TFs
Other Daphnia pulex TFs

198 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CpipJ_CPIJ014043 Culex pipiens CpipJ_CPIJ014043 N 0.523
AAEL011380 Aedes aegypti AAEL011380 N 0.538
ACEP16613 Atta cephalotes ACEP16613 N 0.542
ACYPI007949 Acyrthosiphon pisum ACYPI007949 N 0.549
ADAC001494 Anopheles darlingi ADAC001494 N 0.538
AGAP000005 Anopheles gambiae AGAP000005 N 0.538
Aqu1.227714 Amphimedon queenslandica Aqu1.227714 N 0.429
BGIBMGA001132 Bombyx mori BGIBMGA001132 N 0.578
Bm4180 Brugia malayi Bm4180 N 0.436
CapteG158220 Capitella teleta CapteG158220 N 0.444
CBG17468 Caenorhabditis briggsae CBG17468 N 0.427
CBN17977 Caenorhabditis brenneri CBN17977 N 0.424
CGI_10023724 Crassostrea gigas CGI_10023724 N 0.425
CJA09678 Caenorhabditis japonica CJA09678 N 0.424
CPIJ014043 Culex quinquefasciatus CPIJ014043 N 0.523
DAPPUDRAFT_232871 Daphnia pulex DAPPUDRAFT_232871 N 0.638
EFV57410 Trichinella spiralis EFV57410 N 0.455
ENSAMXG00000014031 Astyanax mexicanus ENSAMXG00000014031 N 0.428
ENSAMXG00000014832 Astyanax mexicanus ENSAMXG00000014832 N 0.458
ENSBTAG00000031711 Bos taurus ENSBTAG00000031711 N 0.430
hmg1/2 Ciona intestinalis ENSCING00000004075 N 0.510
ENSCJAG00000004401 Callithrix jacchus ENSCJAG00000004401 N 0.430
ENSCJAG00000014214 Callithrix jacchus ENSCJAG00000014214 N 0.437
ENSCJAG00000022832 Callithrix jacchus ENSCJAG00000022832 N 0.436
ENSCJAG00000033322 Callithrix jacchus ENSCJAG00000033322 N 0.436
ENSCSAG00000013078 Chlorocebus sabaeus ENSCSAG00000013078 N 0.437
ENSCSAVG00000000341 Ciona savignyi ENSCSAVG00000000341 N 0.507
hmgb3b Danio rerio ENSDARG00000006408 N 0.417
hmgb2a Danio rerio ENSDARG00000029722 N 0.448
hmgb1a Danio rerio ENSDARG00000099175 N 0.440
ENSDNOG00000005537 Dasypus novemcinctus ENSDNOG00000005537 N 0.436
ENSFCAG00000028961 Felis catus ENSFCAG00000028961 N 0.430
hmgb2b Gasterosteus aculeatus ENSGACG00000001173 N 0.444
hmgb1b Gasterosteus aculeatus ENSGACG00000011447 N 0.490
ENSGMOG00000010060 Gadus morhua ENSGMOG00000010060 N 0.430
ENSGMOG00000010657 Gadus morhua ENSGMOG00000010657 N 0.436
HMGB2 Macaca mulatta ENSMMUG00000020008 N 0.422
ENSMPUG00000018359 Mustela putorius furo ENSMPUG00000018359 N 0.437
ENSOARG00000010383 Ovis aries ENSOARG00000010383 N 0.436
ENSOARG00000015382 Ovis aries ENSOARG00000015382 N 0.436
ENSOARG00000015955 Ovis aries ENSOARG00000015955 N 0.436
ENSOCUG00000004133 Oryctolagus cuniculus ENSOCUG00000004133 N 0.434
ENSOCUG00000021132 Oryctolagus cuniculus ENSOCUG00000021132 N 0.422
HMGB3 Oryctolagus cuniculus ENSOCUG00000024959 N 0.440
ENSONIG00000005505 Oreochromis niloticus ENSONIG00000005505 N 0.418
ENSONIG00000019935 Oreochromis niloticus ENSONIG00000019935 N 0.427
hmgb1a Oryzias latipes ENSORLG00000003400 N 0.457
hmgb2b Oryzias latipes ENSORLG00000018687 N 0.427
ENSPANG00000007527 Papio anubis ENSPANG00000007527 N 0.436
ENSPANG00000010595 Papio anubis ENSPANG00000010595 N 0.421
ENSPFOG00000004533 Poecilia formosa ENSPFOG00000004533 N 0.423
ENSPFOG00000004794 Poecilia formosa ENSPFOG00000004794 N 0.444
ENSPFOG00000008464 Poecilia formosa ENSPFOG00000008464 N 0.463
ENSPMAG00000007397 Petromyzon marinus ENSPMAG00000007397 N 0.439
Hmgb2l1 Rattus norvegicus ENSRNOG00000013167 N 0.430
RGD1561694 Rattus norvegicus ENSRNOG00000029107 N 0.430
Hmgb2 Rattus norvegicus ENSRNOG00000033321 N 0.430
LOC688583 Rattus norvegicus ENSRNOG00000050910 N 0.437
HMGB2 Sus scrofa ENSSSCG00000009704 N 0.434
ENSSSCG00000020770 Sus scrofa ENSSSCG00000020770 N 0.437
ENSSSCG00000024283 Sus scrofa ENSSSCG00000024283 N 0.437
ENSSTOG00000012404 Ictidomys tridecemlineatus ENSSTOG00000012404 N 0.465
hmgb2b Tetraodon nigroviridis ENSTNIG00000004824 N 0.440
hmgb1a Tetraodon nigroviridis ENSTNIG00000009909 N 0.441
hmgb1b Takifugu rubripes ENSTRUG00000004822 N 0.426
hmgb2b Takifugu rubripes ENSTRUG00000005015 N 0.440
hmgb1a Takifugu rubripes ENSTRUG00000008452 N 0.452
ENSXMAG00000006844 Xiphophorus maculatus ENSXMAG00000006844 N 0.423
ENSXMAG00000011106 Xiphophorus maculatus ENSXMAG00000011106 N 0.444
Dsp1 Drosophila melanogaster FBgn0011764 N 0.557
GA11488 Drosophila pseudoobscura FBgn0071539 N 0.557
GF19115 Drosophila ananassae FBgn0096126 N 0.557
GG17955 Drosophila erecta FBgn0110175 N 0.557
GH12282 Drosophila grimshawi FBgn0119761 N 0.557
GI10980 Drosophila mojavensis FBgn0133743 N 0.557
GD17278 Drosophila simulans FBgn0188840 N 0.557
GJ19445 Drosophila virilis FBgn0206588 N 0.557
GK25058 Drosophila willistoni FBgn0227017 N 0.557
GE17263 Drosophila yakuba FBgn0234741 N 0.557
GB47828 Apis mellifera GB47828 N 0.420
HelroG157878 Helobdella robusta HelroG157878 N 0.470
HelroG87827 Helobdella robusta HelroG87827 N 0.433
HMEL007340 Heliconius melpomene HMEL007340 N 0.575
ISCW017350 Ixodes scapularis ISCW017350 N 0.513
LOAG_04936 Loa loa LOAG_04936 N 0.436
LotgiG200052 Lottia gigantea LotgiG200052 N 0.454
MCINX009638 Melitaea cinxia MCINX009638 N 0.462
NV15664 Nasonia vitripennis NV15664 N 0.556
PHUM006290 Pediculus humanus PHUM006290 N 0.513
RPRC006379 Rhodnius prolixus RPRC006379 N 0.484
SINV22586 Solenopsis invicta SINV22586 N 0.542
SMAR013695 Strigamia maritima SMAR013695 N 0.509
Smp_000980 Schistosoma mansoni Smp_000980 N 0.440
Smp_100090 Schistosoma mansoni Smp_100090 N 0.420
Smp_103530 Schistosoma mansoni Smp_103530 N 0.442
SPU_005572 Strongylocentrotus purpuratus SPU_005572 N 0.473
tetur02g08260 Tetranychus urticae tetur02g08260 N 0.540
tetur02g08340 Tetranychus urticae tetur02g08340 N 0.544
hmg-1.2 Caenorhabditis elegans WBGene00001972 N 0.424
WBGene00245261 Onchocerca volvulus WBGene00245261 N 0.436
YQE_03203 Dendroctonus ponderosae YQE_03203 N 0.501
Cflo_05895--XP_001121384.1_APIME Camponotus floridanus Cflo_05895--XP_001121384.1_APIME N 0.542
Hsal_13110--XP_001121384.1_APIME Harpegnathos saltator Hsal_13110--XP_001121384.1_APIME N 0.542
Myotis_brandtii_Hmgb2_10018437 Myotis brandtii Myotis_brandtii_Hmgb2_10018437 N 0.436
Myotis_brandtii_HMGB3_10026974 Myotis brandtii Myotis_brandtii_HMGB3_10026974 N 0.420
fgenesh2_pm.scaffold_24000033 Branchiostoma floridae fgenesh2_pm.scaffold_24000033 N 0.451
Sakowv30042012m.g Saccoglossus kowalevskii Sakowv30042012m.g N 0.460
AAC59859 Xenopus laevis AAC59859 N 0.454
AAH44009 Xenopus laevis AAH44009 N 0.446
AAH73449 Xenopus laevis AAH73449 N 0.454
AAI68534 Xenopus tropicalis AAI68534 N 0.448
BAA06440 Xenopus laevis BAA06440 N 0.428
LCUP007363 Lucilia cuprina LCUP007363 N 0.553
LDEC006842 Leptinotarsa decemlineata LDEC006842 N 0.533
Sjc_0031360 Schistosoma japonicum Sjc_0031360 N 0.418
Sjc_0051340 Schistosoma japonicum Sjc_0051340 N 0.417
SMU15016767 Schmidtea mediterranea SMU15016767 N 0.424
SMU15030256 Schmidtea mediterranea SMU15030256 N 0.492
hmgb2.S Xenopus laevis XB-GENE-1000251 N 0.435
AALB006743 Anopheles albimanus AALB006743 N 0.538
AARA010318 Anopheles arabiensis AARA010318 N 0.538
AATE010886 Anopheles atroparvus AATE010886 N 0.462
AATE018776 Anopheles atroparvus AATE018776 N 0.538
ACUA021022 Anopheles culicifacies ACUA021022 N 0.538
ADIR000367 Anopheles dirus ADIR000367 N 0.452
ADIR011701 Anopheles dirus ADIR011701 N 0.538
AEPI002924 Anopheles epiroticus AEPI002924 N 0.538
AEPI003041 Anopheles epiroticus AEPI003041 N 0.421
AFAF003948 Anopheles farauti AFAF003948 N 0.538
AFUN010134 Anopheles funestus AFUN010134 N 0.538
AMAM015540 Anopheles maculatus AMAM015540 N 0.538
AMEC021909 Anopheles melas AMEC021909 N 0.538
AMEM017336 Anopheles merus AMEM017336 N 0.538
AMIN005344 Anopheles minimus AMIN005344 N 0.538
AQUA004962 Anopheles quadriannulatus AQUA004962 N 0.503
ASIS000124 Anopheles sinensis ASIS000124 N 0.538
ASIS009950 Anopheles sinensis ASIS009950 N 0.469
MDOA008812 Musca domestica MDOA008812 N 0.539
A_05510 Schistosoma haematobium A_05510 N 0.442
ACAC_0001052301 Angiostrongylus cantonensis ACAC_0001052301 N 0.426
ACOC_0000768601 Angiostrongylus costaricensis ACOC_0000768601 N 0.453
ANCCAN_10156 Ancylostoma caninum ANCCAN_10156 N 0.416
ASU_03902 Ascaris suum ASU_03902 N 0.436
csin110255 Clonorchis sinensis csin110255 N 0.425
D915_15256 Fasciola hepatica D915_15256 N 0.428
D917_01254 Trichinella nativa D917_01254 N 0.455
D917_08189 Trichinella nativa D917_08189 N 0.420
D918_07195 Trichuris suis D918_07195 N 0.439
DILT_0001497901 Diphyllobothrium latum DILT_0001497901 N 0.451
DME_0001055201 Dracunculus medinensis DME_0001055201 N 0.419
ECANG7_02036 Echinococcus canadensis ECANG7_02036 N 0.422
EEL_0000068601 Elaeophora elaphi EEL_0000068601 N 0.436
EmuJ_001049000 Echinococcus multilocularis EmuJ_001049000 N 0.457
EVEC_0000577301 Enterobius vermicularis EVEC_0000577301 N 0.436
Hba_13817 Heterorhabditis bacteriophora Hba_13817 N 0.454
HCOI00860100 Haemonchus contortus HCOI00860100 N 0.453
HDID_0000237901 Hymenolepis diminuta HDID_0000237901 N 0.439
HmN_000466000 Hymenolepis microstoma HmN_000466000 N 0.439
HNAJ_0001249801 Hymenolepis nana HNAJ_0001249801 N 0.439
L596_g22130 Steinernema carpocapsae L596_g22130 N 0.434
L889_g13533 Steinernema feltiae L889_g13533 N 0.434
L892_g17551 Steinernema scapterisci L892_g17551 N 0.434
L893_g5947 Steinernema glaseri L893_g5947 N 0.434
MCOS_0000526101 Mesocestoides corti MCOS_0000526101 N 0.460
nAv.1.0.1.g02101 Acanthocheilonema viteae nAv.1.0.1.g02101 N 0.436
NBR_0000911001 Nippostrongylus brasiliensis NBR_0000911001 N 0.453
nDi.2.2.2.g04979 Dirofilaria immitis nDi.2.2.2.g04979 N 0.436
NECAME_09126 Necator americanus NECAME_09126 N 0.453
nRc.2.0.1.g43473 Romanomermis culicivorax nRc.2.0.1.g43473 N 0.435
PEQ_0000150901 Parascaris equorum PEQ_0000150901 N 0.436
PTRK_0000986200 Parastrongyloides trichosuri PTRK_0000986200 N 0.424
PXEA_0000566701 Protopolystoma xenopodis PXEA_0000566701 N 0.456
PXEA_0000637001 Protopolystoma xenopodis PXEA_0000637001 N 0.469
PXEA_0002175501 Protopolystoma xenopodis PXEA_0002175501 N 0.468
SBAD_0000405201 Soboliphyme baturini SBAD_0000405201 N 0.426
SCUD_0000020101 Schistosoma curassoni SCUD_0000020101 N 0.440
SCUD_0000067701 Schistosoma curassoni SCUD_0000067701 N 0.442
SMRZ_0000146101 Schistosoma margrebowiei SMRZ_0000146101 N 0.442
SMRZ_0001808901 Schistosoma margrebowiei SMRZ_0001808901 N 0.442
SMTD_0001194601 Schistosoma mattheei SMTD_0001194601 N 0.440
SMUV_0000232601 Syphacia muris SMUV_0000232601 N 0.436
SPAL_0001030300 Strongyloides papillosus SPAL_0001030300 N 0.424
SROB_0000153901 Schistosoma rodhaini SROB_0000153901 N 0.440
SROB_0000500401 Schistosoma rodhaini SROB_0000500401 N 0.420
SROB_0001061001 Schistosoma rodhaini SROB_0001061001 N 0.442
SSLN_0000493501 Schistocephalus solidus SSLN_0000493501 N 0.451
SSTP_0000371800 Strongyloides stercoralis SSTP_0000371800 N 0.424
SVE_0494300 Strongyloides venezuelensis SVE_0494300 N 0.424
T265_10726 Opisthorchis viverrini T265_10726 N 0.435
T265_12733 Opisthorchis viverrini T265_12733 N 0.446
T265_14643 Opisthorchis viverrini T265_14643 N 0.425
TCLT_0000879501 Thelazia callipaeda TCLT_0000879501 N 0.436
TCNE_0000567001 Toxocara canis TCNE_0000567001 N 0.436
TELCIR_07111 Teladorsagia circumcincta TELCIR_07111 N 0.453
TMUE_s0235000800 Trichuris muris TMUE_s0235000800 N 0.424
TsM_000115400 Taenia solium TsM_000115400 N 0.457
TTAC_0000225801 Hydatigera taeniaeformis TTAC_0000225801 N 0.422
TTRE_0000338301 Trichuris trichiura TTRE_0000338301 N 0.439