Ecym_5292 (Eremothecium cymbalariae)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 Ecym_5292 T327412_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NHP10
M00068_2.00 		Saccharomyces cerevisiae
TCCCCGGC
GCCGGGGA		 PBM
Badis et al.(2008)
NHP10_2069 		0.417 0.603
NHP10
M07496_2.00 		Saccharomyces cerevisiae
YCCCCGGY
RCCGGGGR		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0344.1 		0.417 0.603
NHP10
M08604_2.00 		Saccharomyces cerevisiae
TCCCCGGY
RCCGGGGA		 Misc
DeBoer et al.(2011)
YDL002C_502 		0.417 0.603
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AET40054 Sox 97 164

Links

Other Sox family TFs
Other Eremothecium cymbalariae TFs

15 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CAGL0F03751g Candida glabrata CAGL0F03751g N
KAFR_0B03230 Kazachstania africana KAFR_0B03230 N
KLTH0D12452g Lachancea thermotolerans KLTH0D12452g N
LALA0_S01e04984g Lachancea lanzarotensis LALA0_S01e04984g N
NCAS_0C01050 Naumovozyma castellii NCAS_0C01050 N
NDAI_0K01050 Naumovozyma dairenensis NDAI_0K01050 N
TDEL_0B03810 Torulaspora delbrueckii TDEL_0B03810 N
TPHA_0G01400 Tetrapisispora phaffii TPHA_0G01400 N
ZBAI_05956 Zygosaccharomyces bailii ZBAI_05956 N
ZYRO0F09526g Zygosaccharomyces rouxii ZYRO0F09526g N
16480_YMR213W Saccharomyces paradoxus 16480_YMR213W N
17212_YMR213W Saccharomyces mikatae 17212_YMR213W N
19101_YMR213W Saccharomyces bayanus 19101_YMR213W N
KLTH0D12452g Kluyveromyces thermotolerans KLTH0D12452g N
Kwal_9014 Kluyveromyces waltii Kwal_9014 N
SAKL0H05302g Lachancea kluyveri SAKL0H05302g N