ENSLACG00000004599 (Latimeria chalumnae)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 ENSLACG00000004599 T328223_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Hmg20b
M02487_2.00 		Mus musculus
NNATTATWHWN
NWDWATAATNN		 PBM
Weirauch et al.(2014)
pTH8555 		0.632 0.768
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSLACP00000005178 Sox 104 172
ENSLACP00000021993 Sox 104 172

Links

Other Sox family TFs
Other Latimeria chalumnae TFs

177 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
LCORL Homo sapiens ENSG00000178177 D
LCORL Tursiops truncatus ENSTTRG00000016951 I
LCORL Oryctolagus cuniculus ENSOCUG00000006802 I
LCORL Otolemur garnettii ENSOGAG00000005593 I
ENSPANG00000024022 Papio anubis ENSPANG00000024022 I
LCORL Procavia capensis ENSPCAG00000007105 I
ENSPSIG00000017051 Pelodiscus sinensis ENSPSIG00000017051 I
LCORL Pan troglodytes ENSPTRG00000015943 I
LCORL Pteropus vampyrus ENSPVAG00000013601 I
ENSSHAG00000015746 Sarcophilus harrisii ENSSHAG00000015746 I
LCORL Sus scrofa ENSSSCG00000008748 I
ENSSTOG00000000960 Ictidomys tridecemlineatus ENSSTOG00000000960 I
LCORL Taeniopygia guttata ENSTGUG00000009625 I
ENSTSYG00000014055 Tarsius syrichta ENSTSYG00000014055 I
ENSOARG00000004333 Ovis aries ENSOARG00000004333 I
LCORL Vicugna pacos ENSVPAG00000010356 I
Aan_R007397 Calypte anna Aan_R007397 I
Afo_R006360 Aptenodytes forsteri Afo_R006360 I
Alligator_sinensis_CCG006744.1 Alligator sinensis Alligator_sinensis_CCG006744.1 I
Brh_R013202 Buceros rhinoceros Brh_R013202 I
ENSP00000371661-D1 Bos grunniens ENSP00000371661-D1 I
ENSP00000371661 Macaca fascicularis ENSP00000371661 I
Gfo_R010322 Geospiza fortis Gfo_R010322 I
Myotis_brandtii_LCORL_10024397 Myotis brandtii Myotis_brandtii_LCORL_10024397 I
Ogr00836 Ophisaurus gracilis Ogr00836 I
Pvit_18026 Pogona vitticeps Pvit_18026 I
Tal_R001804 Tyto alba Tal_R001804 I
ENSFALG00000009227 Ficedula albicollis ENSFALG00000009227 I
ENSAMEG00000000192 Ailuropoda melanoleuca ENSAMEG00000000192 I
ENSAPLG00000006384 Anas platyrhynchos ENSAPLG00000006384 I
LCORL Bos taurus ENSBTAG00000046561 I
LCORL Canis familiaris ENSCAFG00000016672 I
LCORL Callithrix jacchus ENSCJAG00000012800 I
ENSCPOG00000003269 Cavia porcellus ENSCPOG00000003269 I
ENSCSAG00000016522 Chlorocebus sabaeus ENSCSAG00000016522 I
lcorl Danio rerio ENSDARG00000070098 I
LCORL Dasypus novemcinctus ENSDNOG00000001545 I
ENSDORG00000003797 Dipodomys ordii ENSDORG00000003797 I
LCORL Equus caballus ENSECAG00000000648 I
LCORL Erinaceus europaeus ENSEEUG00000000419 I
LCORL Anolis carolinensis ENSACAG00000002012 I
LCORL Felis catus ENSFCAG00000029474 I
LCORL Gallus gallus ENSGALG00000014421 I
LCORL Gorilla gorilla ENSGGOG00000014894 I
ENSLACG00000017771 Latimeria chalumnae ENSLACG00000017771 I
LCORL Loxodonta africana ENSLAFG00000009691 I
LCORL Meleagris gallopavo ENSMGAG00000012554 I
ENSMICG00000008878 Microcebus murinus ENSMICG00000008878 I
LCORL Myotis lucifugus ENSMLUG00000013781 I
LCORL Monodelphis domestica ENSMODG00000000757 I
ENSMPUG00000002301 Mustela putorius furo ENSMPUG00000002301 I
Lcorl Mus musculus ENSMUSG00000015882 I