LALA0_S09e06216g (Lachancea lanzarotensis)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 LALA0_S09e06216g T330888_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NHP10
M00068_2.00 		Saccharomyces cerevisiae
TCCCCGGC
GCCGGGGA		 PBM
Badis et al.(2008)
NHP10_2069 		0.415 0.667
NHP10
M07496_2.00 		Saccharomyces cerevisiae
YCCCCGGY
RCCGGGGR		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0344.1 		0.415 0.667
NHP10
M08604_2.00 		Saccharomyces cerevisiae
TCCCCGGY
RCCGGGGA		 Misc
DeBoer et al.(2011)
YDL002C_502 		0.415 0.667
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CEP63953 Sox 94 159

Links

Other Sox family TFs
Other Lachancea lanzarotensis TFs

21 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
NHP10 Saccharomyces cerevisiae YDL002C D 0.415
CD36_81110 Candida dubliniensis CD36_81110 I 0.430
G210_3517 Candida maltosa G210_3517 I 0.421
603_YDL002C Saccharomyces bayanus 603_YDL002C I 0.415
3735_YDL002C Saccharomyces paradoxus 3735_YDL002C I 0.415
KNAG_0K01480 Kazachstania naganishii KNAG_0K01480 I 0.442
SKUD_167206 Saccharomyces kudriavzevii SKUD_167206 I 0.415
3225_YDL002C Saccharomyces mikatae 3225_YDL002C I 0.415
TDEL_0D04120 Torulaspora delbrueckii TDEL_0D04120 I 0.497
ZBAI_02112 Zygosaccharomyces bailii ZBAI_02112 I 0.451
ZBAI_07968 Zygosaccharomyces bailii ZBAI_07968 I 0.451
ZYRO0A04378g Zygosaccharomyces rouxii ZYRO0A04378g I 0.444
SAKL0C11308g Lachancea kluyveri SAKL0C11308g N 0.588
Kwal_11003 Kluyveromyces waltii Kwal_11003 N 0.523
KLTH0G16566g Kluyveromyces thermotolerans KLTH0G16566g N 0.566
SPAPADRAFT_141112 Spathaspora passalidarum SPAPADRAFT_141112 N 0.440
KLTH0G16566g Lachancea thermotolerans KLTH0G16566g N 0.566
HPODL_00357 Ogataea parapolymorpha HPODL_00357 N 0.475
GNLVRS01_PISO0H08323g Millerozyma farinosa GNLVRS01_PISO0H08323g N 0.436
GNLVRS01_PISO0G08322g Millerozyma farinosa GNLVRS01_PISO0G08322g N 0.436
DEHA2F18194g Debaryomyces hansenii DEHA2F18194g N 0.436