maker-par_contig_8731-fgenesh-gene-0.0 (Pythium arrhenomanes)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 maker-par_contig_8731-fgenesh-gene-0.0 T331145_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
EPrPR00000026475 Sox 29 97
EPrPR00000026475 Sox 117 185

Links

Other Sox family TFs
Other Pythium arrhenomanes TFs

15 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SPRG_05304 Saprolegnia parasitica SPRG_05304 N 0.506
ALNC14_025770 Albugo laibachii ALNC14_025770 N 0.662
F443_05401 Phytophthora parasitica F443_05401 N 0.631
fgenesh_scip_prom.28083.225 Phytophthora lateralis fgenesh_scip_prom.28083.225 N 0.654
fgenesh_scip_prom.46568.1753 Phytophthora kernoviae fgenesh_scip_prom.46568.1753 N 0.634
HpaG806488 Hyaloperonospora arabidopsidis HpaG806488 N 0.456
maker-pag1_scaffold_208-fgenesh-gene-0.7 Pythium aphanidermatum maker-pag1_scaffold_208-fgenesh-gene-0.7 N 0.714
maker-pir_contig_78-fgenesh-gene-0.0 Pythium irregulare maker-pir_contig_78-fgenesh-gene-0.0 N 0.675
maker-pve_contig_1-fgenesh-gene-1.10 Pythium vexans maker-pve_contig_1-fgenesh-gene-1.10 N 0.645
maker-pve_contig_1-fgenesh-gene-1.21 Pythium vexans maker-pve_contig_1-fgenesh-gene-1.21 N 0.467
Phyra73033 Phytophthora ramorum Phyra73033 N 0.654
PITG_16117 Phytophthora infestans PITG_16117 N 0.640
PYU1_G009481 Pythium ultimum PYU1_G009481 N 0.675
estExt_fgenesh1_kg.C_12090001 Phytophthora capsici estExt_fgenesh1_kg.C_12090001 N 0.631
estExt_fgenesh1_kg.C_40116 Phytophthora capsici estExt_fgenesh1_kg.C_40116 N 0.478