CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Smp_000980
(
Schistosoma mansoni
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
Smp_000980
T332644_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Smp_000980.1:pep
Sox
10
80
PKGPMSAYACFVQVIREEHKKKHPGEQIVFSDFSKKCAERWKLMTPKEKKRFEDLAVLDRERFNREMCDYV
Smp_000980.1:pep
Sox
100
166
PARAWSAFFFFCDEFRSKVRESNPDWKVADIAKELGRQWETCQDKAKYELLAQKDKQRYEEDMIKYR
Links
Other
Sox
family TFs
Other
Schistosoma mansoni
TFs
240 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
hsf-1
Caenorhabditis elegans
WBGene00002004
D
SMUV_0000043201
Syphacia muris
SMUV_0000043201
I
MhA1_Contig1076.frz3.gene4
Meloidogyne hapla
MhA1_Contig1076.frz3.gene4
I
nAv.1.0.1.g08619
Acanthocheilonema viteae
nAv.1.0.1.g08619
I
NBR_0001979501
Nippostrongylus brasiliensis
NBR_0001979501
I
nDi.2.2.2.g05157
Dirofilaria immitis
nDi.2.2.2.g05157
I
nLs.2.1.2.g08921
Litomosoides sigmodontis
nLs.2.1.2.g08921
I
nOo.2.0.1.g06259
Onchocerca ochengi
nOo.2.0.1.g06259
I
nRc.2.0.1.g30983
Romanomermis culicivorax
nRc.2.0.1.g30983
I
PTRK_0000997100
Parastrongyloides trichosuri
PTRK_0000997100
I
PTRK_0001079800
Parastrongyloides trichosuri
PTRK_0001079800
I
RSKR_0000052100
Rhabditophanes kr3021
RSKR_0000052100
I
HCOI00423400
Haemonchus contortus
HCOI00423400
I
snap_masked-nMf.1.1.scaf11979-processed-gene-0.4
Meloidogyne floridensis
snap_masked-nMf.1.1.scaf11979-processed-gene-0.4
I
SPAL_0000387400
Strongyloides papillosus
SPAL_0000387400
I
SPAL_0001635100
Strongyloides papillosus
SPAL_0001635100
I
SSTP_0000347800
Strongyloides stercoralis
SSTP_0000347800
I
SVE_0431600
Strongyloides venezuelensis
SVE_0431600
I
SVE_1155700
Strongyloides venezuelensis
SVE_1155700
I
SVUK_0000175201
Strongylus vulgaris
SVUK_0000175201
I
TCLT_0000441901
Thelazia callipaeda
TCLT_0000441901
I
TCNE_0000949901
Toxocara canis
TCNE_0000949901
I
ASU_10106
Ascaris suum
ASU_10106
I
CBN21581
Caenorhabditis brenneri
CBN21581
I
CRE28338
Caenorhabditis remanei
CRE28338
I
LOAG_08901
Loa loa
LOAG_08901
I
WBGene00238233
Onchocerca volvulus
WBGene00238233
I
Minc16435
Meloidogyne incognita
Minc16435
I
ACOC_0000071501
Angiostrongylus costaricensis
ACOC_0000071501
I
ALUE_0000801801
Ascaris lumbricoides
ALUE_0000801801
I
ANCCAN_00795
Ancylostoma caninum
ANCCAN_00795
I
ANCCEY_01944
Ancylostoma ceylanicum
ANCCEY_01944
I
ASIM_0001223701
Anisakis simplex
ASIM_0001223701
I
HCOI00424600
Haemonchus contortus
HCOI00424600
I
BTMF_0001609701
Brugia timori
BTMF_0001609701
I
BXY_0882000
Bursaphelenchus xylophilus
BXY_0882000
I
DICVIV_08378
Dictyocaulus viviparus
DICVIV_08378
I
DME_0000290701
Dracunculus medinensis
DME_0000290701
I
EEL_0000787901
Elaeophora elaphi
EEL_0000787901
I
EVEC_0000124901
Enterobius vermicularis
EVEC_0000124901
I
GPLIN_000109700
Globodera pallida
GPLIN_000109700
I
GPLIN_000673800
Globodera pallida
GPLIN_000673800
I
Bm6746
Brugia malayi
Bm6746
I