TVAG_161660 (Trichomonas vaginalis)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 TVAG_161660 T333474_2.00 EuPathDB (2015-Mar-30)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NCU02819
M02490_2.00 		Neurospora crassa
NNHNNNNNRN
NYNNNNNDNN		 PBM
Weirauch et al.(2014)
pTH9672 		0.421 0.418
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
TVAG_161660 Sox 1 67

Links

Other Sox family TFs
Other Trichomonas vaginalis TFs

8 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
NCU02819 Neurospora crassa NCU02819 D 0.421
NEUTE1DRAFT_106544 Neurospora tetrasperma NEUTE1DRAFT_106544 I 0.421
SMAC_00615 Sordaria macrospora SMAC_00615 I 0.421
TVAG_125540 Trichomonas vaginalis TVAG_125540 I 0.670
estExt_fgenesh3_kg.C_40082 Neurospora discreta estExt_fgenesh3_kg.C_40082 I 0.421
TVAG_302620 Trichomonas vaginalis TVAG_302620 N 0.626
TVAG_325010 Trichomonas vaginalis TVAG_325010 N 0.669
TVAG_453060 Trichomonas vaginalis TVAG_453060 N 0.425