gw1.29.97.1 (Naegleria gruberi)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 gw1.29.97.1 T334248_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
gw1.29.97.1 Sox 13 78

Links

Other Sox family TFs
Other Naegleria gruberi TFs

4 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
DYT1 Arabidopsis thaliana AT4G21330 D
Bo3g162600 Brassica oleracea Bo3g162600 I
LjT46I09.60.nd Lotus japonicus LjT46I09.60.nd I
chr4.CM1616.440.nc Lotus japonicus chr4.CM1616.440.nc I
Thhalv10027186m.g Eutrema salsugineum Thhalv10027186m.g I
Bostr.10689s0082 Boechera stricta Bostr.10689s0082 I
MTR_4g091910 Medicago truncatula MTR_4g091910 I
GLYMA15G06950 Glycine max GLYMA15G06950 I
GLYMA13G32370 Glycine max GLYMA13G32370 I
DYT1 Arabidopsis lyrata fgenesh1_pg.C_scaffold_7001824 I
Bra013519 Brassica rapa Bra013519 I
PRUPE_ppa021593mg Prunus persica PRUPE_ppa021593mg N
Ca_22008 Cicer arietinum Ca_22008 N
29842.m003700 Ricinus communis 29842.m003700 N
cassava15938.m1 Manihot esculenta cassava15938.m1 N
cassava21844.m1 Manihot esculenta cassava21844.m1 N
Gorai.011G019900 Gossypium raimondii Gorai.011G019900 N