Lus10000418.g (Linum usitatissimum)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 Lus10000418.g T334556_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10000418 Sox 74 134

Links

Other Sox family TFs
Other Linum usitatissimum TFs

5 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GB40407 Apis mellifera GB40407 N
ECPE_0000630101 Echinostoma caproni ECPE_0000630101 N
D915_09507 Fasciola hepatica D915_09507 N
csin110359 Clonorchis sinensis csin110359 N
XP_002932070 Xenopus tropicalis XP_002932070 N
Sakowv30007281m.g Saccoglossus kowalevskii Sakowv30007281m.g N
Ocbimv22015923m.g Octopus bimaculoides Ocbimv22015923m.g N
Hsal_12996--XP_001120922.1_APIME Harpegnathos saltator Hsal_12996--XP_001120922.1_APIME N
Cflo_08746--XP_001120922.1_APIME Camponotus floridanus Cflo_08746--XP_001120922.1_APIME N
tetur28g00880 Tetranychus urticae tetur28g00880 N
PHUM498340 Pediculus humanus PHUM498340 N
NV10328 Nasonia vitripennis NV10328 N
LotgiG79113 Lottia gigantea LotgiG79113 N
HelroG64733 Helobdella robusta HelroG64733 N
BGIBMGA000497 Bombyx mori BGIBMGA000497 N
ENSPMAG00000000069 Petromyzon marinus ENSPMAG00000000069 N
ENSPFOG00000002143 Poecilia formosa ENSPFOG00000002143 N
ENSORLG00000018098 Oryzias latipes ENSORLG00000018098 N
ENSOANG00000012949 Ornithorhynchus anatinus ENSOANG00000012949 N
ENSMODG00000023118 Monodelphis domestica ENSMODG00000023118 N
ENSLOCG00000009094 Lepisosteus oculatus ENSLOCG00000009094 N
ENSLACG00000012364 Latimeria chalumnae ENSLACG00000012364 N
si:dkey-34f9.3 Danio rerio ENSDARG00000077813 N
ENSAMXG00000018323 Astyanax mexicanus ENSAMXG00000018323 N
DAPPUDRAFT_39727 Daphnia pulex DAPPUDRAFT_39727 N
CGI_10004257 Crassostrea gigas CGI_10004257 N
CapteG94620 Capitella teleta CapteG94620 N
CapteG155726 Capitella teleta CapteG155726 N