Scas_Contig682.13 (Saccharomyces castellii)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 Scas_Contig682.13 T334963_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HMO1
M11344_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$_HMO1_01 		0.609 0.855
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Scas_Contig682.13 Sox 111 184

Links

Other Sox family TFs
Other Saccharomyces castellii TFs

29 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PV05_09876 Exophiala xenobiotica PV05_09876 N
PMAA_001790 Penicillium marneffei PMAA_001790 N
estExt_fgenesh1_pg.C_80203 Cryphonectria parasitica estExt_fgenesh1_pg.C_80203 N
fgenesh1_pg.C_scaffold_6000355 Mycosphaerella fijiensis fgenesh1_pg.C_scaffold_6000355 N
Z519_01036 Cladophialophora bantiana Z519_01036 N
Z518_04980 Rhinocladiella mackenziei Z518_04980 N
Z518_02267 Rhinocladiella mackenziei Z518_02267 N
TSTA_099190 Talaromyces stipitatus TSTA_099190 N
PV11_00794 Exophiala sideris PV11_00794 N
PV08_11467 Exophiala spinifera PV08_11467 N
PV08_00876 Exophiala spinifera PV08_00876 N
PV06_05578 Exophiala oligosperma PV06_05578 N
PV06_02162 Exophiala oligosperma PV06_02162 N
PV06_00861 Exophiala oligosperma PV06_00861 N
A1O5_09560 Cladophialophora psammophila A1O5_09560 N
PV04_08619 Capronia semiimmersa PV04_08619 N
PV04_00541 Capronia semiimmersa PV04_00541 N
PMAA_001790 Talaromyces marneffei PMAA_001790 N
MYCFIDRAFT_79333 Pseudocercospora fijiensis MYCFIDRAFT_79333 N
M438DRAFT_363806 Aureobasidium pullulans M438DRAFT_363806 N
M437DRAFT_60050 Aureobasidium melanogenum M437DRAFT_60050 N
JL09_g1719 Pichia kudriavzevii JL09_g1719 N
G647_04386 Cladophialophora carrionii G647_04386 N
G647_01486 Cladophialophora carrionii G647_01486 N
CADANGAG00007889 Aspergillus niger CADANGAG00007889 N
ACLA_074230 Aspergillus clavatus CADACLAG00006381 N
AUEXF2481DRAFT_701448 Aureobasidium subglaciale AUEXF2481DRAFT_701448 N
AUEXF2481DRAFT_234640 Aureobasidium subglaciale AUEXF2481DRAFT_234640 N