CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
L892_g15959
(
Steinernema scapterisci
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
L892_g15959
T336531_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
L892_g15959.t1
Sox
597
663
PKKNQTAYFLWFSDNRSSITKEGDRVADTAKRAGAIWKDMSSEDKAPYEERAKEDKDRYQREMKKYL
L892_g15959.t2
Sox
600
666
PKKNQTAYFLWFSDNRSSITKEGDRVADTAKRAGAIWKDMSSEDKAPYEERAKEDKDRYQREMKKYL
Links
Other
Sox
family TFs
Other
Steinernema scapterisci
TFs
46 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GALMADRAFT_215335
Galerina marginata
GALMADRAFT_215335
I
0.000
GG13363
Drosophila erecta
FBgn0105635
N
0.000
XP_002941963
Xenopus tropicalis
XP_002941963
N
0.000
chd3
Xenopus tropicalis
XB-GENE-1008908
N
0.000
LDEC009474
Leptinotarsa decemlineata
LDEC009474
N
0.000
YQE_12532
Dendroctonus ponderosae
YQE_12532
N
0.000
SINV11745
Solenopsis invicta
SINV11745
N
0.000
MGG_00866
Magnaporthe oryzae
MGG_00866
N
0.000
MCINX004608
Melitaea cinxia
MCINX004608
N
0.000
LACBIDRAFT_297819
Laccaria bicolor
LACBIDRAFT_297819
N
0.000
KGM_21779
Danaus plexippus
KGM_21779
N
0.000
K443DRAFT_674317
Laccaria amethystina
K443DRAFT_674317
N
0.000
ISCW005933
Ixodes scapularis
ISCW005933
N
0.000
ACEP22065
Atta cephalotes
ACEP22065
N
0.000
ENSSHAG00000004107
Sarcophilus harrisii
ENSSHAG00000004107
N
0.000
CHD4
Ochotona princeps
ENSOPRG00000003477
N
0.000
ENSOCUG00000023865
Oryctolagus cuniculus
ENSOCUG00000023865
N
0.000
ENSMODG00000024829
Monodelphis domestica
ENSMODG00000024829
N
0.000
CHD5
Macaca mulatta
ENSMMUG00000016838
N
0.000
CHD4
Microcebus murinus
ENSMICG00000006588
N
0.000
CHD4
Echinops telfairi
ENSETEG00000005912
N
0.000
CHD5
Echinops telfairi
ENSETEG00000004120
N
0.000
chd4b
Danio rerio
ENSDARG00000025789
N
0.000
BGIBMGA002931
Bombyx mori
BGIBMGA002931
N
0.000
ACYPI56610
Acyrthosiphon pisum
ACYPI56610
N
0.000