CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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nAv.1.0.1.g02101
(
Acanthocheilonema viteae
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
nAv.1.0.1.g02101
T336632_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
nAv.1.0.1.t02101-RA
Sox
10
79
RGKTSPYGFFVKMCYEEHKKKYPNENVQVTEISKKCSEKWKTMSDDEKRRFFELAQKDAERYQAEVAAYG
nAv.1.0.1.t02101-RA
Sox
97
165
PKRALSAFFFFSHDKRPEVQQQHPEWKVGQVAQELGRFWKALGEEERAVYERKALEDKERYAEEMRNYK
Links
Other
Sox
family TFs
Other
Acanthocheilonema viteae
TFs
169 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Rel
Mus musculus
ENSMUSG00000020275
D
0.000
ENSAMEG00000018236
Ailuropoda melanoleuca
ENSAMEG00000018236
I
0.000
REL
Canis familiaris
ENSCAFG00000002981
I
0.000
ENSCSAG00000014415
Chlorocebus sabaeus
ENSCSAG00000014415
I
0.000
ENSETEG00000002607
Echinops telfairi
ENSETEG00000002607
I
0.000
ENSFALG00000011066
Ficedula albicollis
ENSFALG00000011066
I
0.000
REL
Felis catus
ENSFCAG00000008018
I
0.000
REL
Gallus gallus
ENSGALG00000007845
I
0.000
REL
Loxodonta africana
ENSLAFG00000013507
I
0.000
REL
Meleagris gallopavo
ENSMGAG00000001721
I
0.000
REL
Oryctolagus cuniculus
ENSOCUG00000004968
I
0.000
REL
Pteropus vampyrus
ENSPVAG00000000364
I
0.000
REL
Sorex araneus
ENSSARG00000011809
I
0.000
REL
Sus scrofa
ENSSSCG00000008388
I
0.000
Myotis_brandtii_REL_10034307
Myotis brandtii
Myotis_brandtii_REL_10034307
I
0.000