CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
nRc.2.0.1.g43473
(
Romanomermis culicivorax
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
nRc.2.0.1.g43473
T336767_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
nRc.2.0.1.t43473-RA
Sox
8
77
PRGKTSPYGFFVKMCYEEHKKKYPSENVQVTEISKKCSEKWKTMTQSEKQRFYELAQKDAERYQSECMAF
nRc.2.0.1.t43473-RA
Sox
96
164
PKRALSAFFFFSHDKRPEVQQSHPEWKVGQVAQELGRQWKDLSEETKRKYEEMAQRDKGRYEVEMRDYK
Links
Other
Sox
family TFs
Other
Romanomermis culicivorax
TFs
152 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F503_00174
Ophiostoma piceae uamh
F503_00174
I
CADANGAG00013131
Aspergillus niger
CADANGAG00013131
N
K437DRAFT_117734
Tilletiaria anomala
K437DRAFT_117734
N
PaG_02455
Pseudozyma aphidis
PaG_02455
N
PSEUBRA_SCAF2g02553
Pseudozyma brasiliensis
PSEUBRA_SCAF2g02553
N
sr12563
Sporisorium reilianum
sr12563
N
UHOR_02203
Ustilago hordei
UHOR_02203
N
UM01482
Ustilago maydis
UM01482
N