PXEA_0000566701 (Protopolystoma xenopodis)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 PXEA_0000566701 T336836_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
PXEA_0000566701-mRNA-1 Sox 25 106
PXEA_0000566701-mRNA-1 Sox 126 192

Links

Other Sox family TFs
Other Protopolystoma xenopodis TFs

198 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CpipJ_CPIJ014043 Culex pipiens CpipJ_CPIJ014043 N 0.487
AAEL011380 Aedes aegypti AAEL011380 N 0.476
ACEP16613 Atta cephalotes ACEP16613 N 0.473
ACYPI007949 Acyrthosiphon pisum ACYPI007949 N 0.500
ADAC001494 Anopheles darlingi ADAC001494 N 0.476
AGAP000005 Anopheles gambiae AGAP000005 N 0.476
BGIBMGA001132 Bombyx mori BGIBMGA001132 N 0.415
Bm4180 Brugia malayi Bm4180 N 0.444
CapteG158220 Capitella teleta CapteG158220 N 0.453
CBG17468 Caenorhabditis briggsae CBG17468 N 0.445
CBN17977 Caenorhabditis brenneri CBN17977 N 0.441
CGI_10023724 Crassostrea gigas CGI_10023724 N 0.506
CJA09678 Caenorhabditis japonica CJA09678 N 0.445
CPIJ014043 Culex quinquefasciatus CPIJ014043 N 0.487
CRE02943 Caenorhabditis remanei CRE02943 N 0.430
DAPPUDRAFT_232871 Daphnia pulex DAPPUDRAFT_232871 N 0.490
DAPPUDRAFT_306496 Daphnia pulex DAPPUDRAFT_306496 N 0.456
EFV57410 Trichinella spiralis EFV57410 N 0.484
ENSAMXG00000014832 Astyanax mexicanus ENSAMXG00000014832 N 0.432
hmg1/2 Ciona intestinalis ENSCING00000004075 N 0.452
ENSCJAG00000008378 Callithrix jacchus ENSCJAG00000008378 N 0.426
ENSCJAG00000008384 Callithrix jacchus ENSCJAG00000008384 N 0.423
ENSCJAG00000022832 Callithrix jacchus ENSCJAG00000022832 N 0.453
ENSCPOG00000003985 Cavia porcellus ENSCPOG00000003985 N 0.426
ENSCSAVG00000000341 Ciona savignyi ENSCSAVG00000000341 N 0.445
hmgb1a Danio rerio ENSDARG00000099175 N 0.432
ENSDNOG00000005537 Dasypus novemcinctus ENSDNOG00000005537 N 0.453
ENSECAG00000005186 Equus caballus ENSECAG00000005186 N 0.426
ENSFCAG00000028961 Felis catus ENSFCAG00000028961 N 0.426
HMGB1 Microcebus murinus ENSMICG00000006213 N 0.426
ENSMICG00000016224 Microcebus murinus ENSMICG00000016224 N 0.427
ENSMMUG00000001275 Macaca mulatta ENSMMUG00000001275 N 0.426
HMGB2 Macaca mulatta ENSMMUG00000020008 N 0.418
ENSMODG00000009238 Monodelphis domestica ENSMODG00000009238 N 0.426
ENSOARG00000010383 Ovis aries ENSOARG00000010383 N 0.432
ENSOARG00000011611 Ovis aries ENSOARG00000011611 N 0.446
ENSOARG00000015382 Ovis aries ENSOARG00000015382 N 0.432
ENSOARG00000015955 Ovis aries ENSOARG00000015955 N 0.432
ENSOARG00000017078 Ovis aries ENSOARG00000017078 N 0.426
ENSOCUG00000004133 Oryctolagus cuniculus ENSOCUG00000004133 N 0.451
ENSOCUG00000021132 Oryctolagus cuniculus ENSOCUG00000021132 N 0.432
ENSOGAG00000028411 Otolemur garnettii ENSOGAG00000028411 N 0.426
ENSPANG00000005029 Papio anubis ENSPANG00000005029 N 0.426
ENSPANG00000007527 Papio anubis ENSPANG00000007527 N 0.432
ENSPANG00000011105 Papio anubis ENSPANG00000011105 N 0.426
ENSPFOG00000008464 Poecilia formosa ENSPFOG00000008464 N 0.424
ENSPPYG00000011668 Pongo abelii ENSPPYG00000011668 N 0.420
Hmgb2l1 Rattus norvegicus ENSRNOG00000013167 N 0.426
RGD1561694 Rattus norvegicus ENSRNOG00000029107 N 0.423
AABR07025074.1 Rattus norvegicus ENSRNOG00000032550 N 0.429
Hmgb2 Rattus norvegicus ENSRNOG00000033321 N 0.426
Hmg1l1 Rattus norvegicus ENSRNOG00000034130 N 0.426
Hmg1l1 Rattus norvegicus ENSRNOG00000051482 N 0.426
AC135696.1 Rattus norvegicus ENSRNOG00000058908 N 0.426
HMGB2 Sus scrofa ENSSSCG00000009704 N 0.430
ENSSTOG00000000443 Ictidomys tridecemlineatus ENSSTOG00000000443 N 0.426
ENSSTOG00000012404 Ictidomys tridecemlineatus ENSSTOG00000012404 N 0.421
ENSTBEG00000009427 Tupaia belangeri ENSTBEG00000009427 N 0.422
hmgb1a Takifugu rubripes ENSTRUG00000008452 N 0.425
Dsp1 Drosophila melanogaster FBgn0011764 N 0.476
GA11488 Drosophila pseudoobscura FBgn0071539 N 0.476
GF19115 Drosophila ananassae FBgn0096126 N 0.476
GG17955 Drosophila erecta FBgn0110175 N 0.476
GH12282 Drosophila grimshawi FBgn0119761 N 0.476
GI10980 Drosophila mojavensis FBgn0133743 N 0.476
GD17278 Drosophila simulans FBgn0188840 N 0.476
GJ19445 Drosophila virilis FBgn0206588 N 0.476
GK25058 Drosophila willistoni FBgn0227017 N 0.476
GE17263 Drosophila yakuba FBgn0234741 N 0.476
HelroG157878 Helobdella robusta HelroG157878 N 0.433
HMEL007340 Heliconius melpomene HMEL007340 N 0.467
ISCW017350 Ixodes scapularis ISCW017350 N 0.458
LOAG_04936 Loa loa LOAG_04936 N 0.444
LotgiG200052 Lottia gigantea LotgiG200052 N 0.493
NV15664 Nasonia vitripennis NV15664 N 0.507
PHUM006290 Pediculus humanus PHUM006290 N 0.450
Ppa-hmg-1.2 Pristionchus pacificus PPA02361 N 0.417
SINV22586 Solenopsis invicta SINV22586 N 0.473
SMAR013695 Strigamia maritima SMAR013695 N 0.473
Smp_000980 Schistosoma mansoni Smp_000980 N 0.531
Smp_100090 Schistosoma mansoni Smp_100090 N 0.458
Smp_103530 Schistosoma mansoni Smp_103530 N 0.546
SPU_005572 Strongylocentrotus purpuratus SPU_005572 N 0.433
tetur02g08260 Tetranychus urticae tetur02g08260 N 0.462
tetur02g08340 Tetranychus urticae tetur02g08340 N 0.459
hmg-1.2 Caenorhabditis elegans WBGene00001972 N 0.441
WBGene00245261 Onchocerca volvulus WBGene00245261 N 0.444
YQE_03203 Dendroctonus ponderosae YQE_03203 N 0.437
Cflo_05895--XP_001121384.1_APIME Camponotus floridanus Cflo_05895--XP_001121384.1_APIME N 0.473
Hsal_13110--XP_001121384.1_APIME Harpegnathos saltator Hsal_13110--XP_001121384.1_APIME N 0.473
Myotis_brandtii_Hmgb2_10018437 Myotis brandtii Myotis_brandtii_Hmgb2_10018437 N 0.437
fgenesh2_pm.scaffold_24000033 Branchiostoma floridae fgenesh2_pm.scaffold_24000033 N 0.450
Sakowv30042012m.g Saccoglossus kowalevskii Sakowv30042012m.g N 0.456
BAA06440 Xenopus laevis BAA06440 N 0.431
LCUP007363 Lucilia cuprina LCUP007363 N 0.476
LDEC006842 Leptinotarsa decemlineata LDEC006842 N 0.453
Sjc_0031360 Schistosoma japonicum Sjc_0031360 N 0.510
Sjc_0051340 Schistosoma japonicum Sjc_0051340 N 0.432
SMU15002907 Schmidtea mediterranea SMU15002907 N 0.497
SMU15016767 Schmidtea mediterranea SMU15016767 N 0.484
SMU15030256 Schmidtea mediterranea SMU15030256 N 0.511
SMU15030485 Schmidtea mediterranea SMU15030485 N 0.467
hmgb2.S Xenopus laevis XB-GENE-1000251 N 0.432
AALB006743 Anopheles albimanus AALB006743 N 0.476
AARA010318 Anopheles arabiensis AARA010318 N 0.476
AATE018776 Anopheles atroparvus AATE018776 N 0.476
ACUA021022 Anopheles culicifacies ACUA021022 N 0.476
ADIR011701 Anopheles dirus ADIR011701 N 0.476
AEPI002924 Anopheles epiroticus AEPI002924 N 0.476
AFAF003948 Anopheles farauti AFAF003948 N 0.476
AFUN010134 Anopheles funestus AFUN010134 N 0.476
AMAM015540 Anopheles maculatus AMAM015540 N 0.476
AMEC021909 Anopheles melas AMEC021909 N 0.476
AMEM017336 Anopheles merus AMEM017336 N 0.476
AMIN005344 Anopheles minimus AMIN005344 N 0.476
AQUA004962 Anopheles quadriannulatus AQUA004962 N 0.448
ASIS000124 Anopheles sinensis ASIS000124 N 0.476
BGLB010942 Biomphalaria glabrata BGLB010942 N 0.500
MDOA008812 Musca domestica MDOA008812 N 0.490
A_00070 Schistosoma haematobium A_00070 N 0.449
A_05510 Schistosoma haematobium A_05510 N 0.546
ACOC_0000768601 Angiostrongylus costaricensis ACOC_0000768601 N 0.463
ANCCAN_10156 Ancylostoma caninum ANCCAN_10156 N 0.426
ASU_03902 Ascaris suum ASU_03902 N 0.444
augustus_masked-nMf.1.1.scaf01778-processed-gene-0.2 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf01778-processed-gene-0.2 N 0.422
BXY_1555400 Bursaphelenchus xylophilus BXY_1555400 N 0.418
csin110255 Clonorchis sinensis csin110255 N 0.523
csin112095 Clonorchis sinensis csin112095 N 0.439
D915_00818 Fasciola hepatica D915_00818 N 0.517
D915_15256 Fasciola hepatica D915_15256 N 0.526
D917_01254 Trichinella nativa D917_01254 N 0.484
D917_08189 Trichinella nativa D917_08189 N 0.444
D918_07195 Trichuris suis D918_07195 N 0.456
DILT_0000548601 Diphyllobothrium latum DILT_0000548601 N 0.528
DILT_0001497901 Diphyllobothrium latum DILT_0001497901 N 0.527
DME_0001055201 Dracunculus medinensis DME_0001055201 N 0.461
ECANG7_02036 Echinococcus canadensis ECANG7_02036 N 0.555
ECANG7_05481 Echinococcus canadensis ECANG7_05481 N 0.464
EEL_0000068601 Elaeophora elaphi EEL_0000068601 N 0.444
EmuJ_000768300 Echinococcus multilocularis EmuJ_000768300 N 0.464
EmuJ_001049000 Echinococcus multilocularis EmuJ_001049000 N 0.577
EVEC_0000577301 Enterobius vermicularis EVEC_0000577301 N 0.444
genemark-nMf.1.1.scaf06964-processed-gene-0.3 Meloidogyne floridensis genemark-nMf.1.1.scaf06964-processed-gene-0.3 N 0.422
Hba_13817 Heterorhabditis bacteriophora Hba_13817 N 0.468
HCOI00860100 Haemonchus contortus HCOI00860100 N 0.463
HDID_0000237901 Hymenolepis diminuta HDID_0000237901 N 0.522
HDID_0000408601 Hymenolepis diminuta HDID_0000408601 N 0.487
HmN_000466000 Hymenolepis microstoma HmN_000466000 N 0.522
HmN_000813000 Hymenolepis microstoma HmN_000813000 N 0.472
HNAJ_0000974401 Hymenolepis nana HNAJ_0000974401 N 0.487
HNAJ_0001249801 Hymenolepis nana HNAJ_0001249801 N 0.522
L596_g22130 Steinernema carpocapsae L596_g22130 N 0.441
L889_g13533 Steinernema feltiae L889_g13533 N 0.441
L892_g17551 Steinernema scapterisci L892_g17551 N 0.441
L893_g5947 Steinernema glaseri L893_g5947 N 0.441
MCOS_0000526101 Mesocestoides corti MCOS_0000526101 N 0.580
MCOS_0000726501 Mesocestoides corti MCOS_0000726501 N 0.529
nAv.1.0.1.g02101 Acanthocheilonema viteae nAv.1.0.1.g02101 N 0.444
NBR_0000911001 Nippostrongylus brasiliensis NBR_0000911001 N 0.463
nDi.2.2.2.g04979 Dirofilaria immitis nDi.2.2.2.g04979 N 0.444
NECAME_09126 Necator americanus NECAME_09126 N 0.463
nRc.2.0.1.g43473 Romanomermis culicivorax nRc.2.0.1.g43473 N 0.444
PEQ_0000150901 Parascaris equorum PEQ_0000150901 N 0.444
PTRK_0000986200 Parastrongyloides trichosuri PTRK_0000986200 N 0.461
PXEA_0000637001 Protopolystoma xenopodis PXEA_0000637001 N 0.449
PXEA_0002175501 Protopolystoma xenopodis PXEA_0002175501 N 0.581
RSKR_0000605700 Rhabditophanes kr3021 RSKR_0000605700 N 0.420
SBAD_0000405201 Soboliphyme baturini SBAD_0000405201 N 0.446
scaffold580-EXSNAP2012.5 Pristionchus exspectatus scaffold580-EXSNAP2012.5 N 0.417
SCUD_0000020101 Schistosoma curassoni SCUD_0000020101 N 0.531
SCUD_0000067701 Schistosoma curassoni SCUD_0000067701 N 0.546
SCUD_0001034301 Schistosoma curassoni SCUD_0001034301 N 0.449
SMRZ_0000146101 Schistosoma margrebowiei SMRZ_0000146101 N 0.546
SMRZ_0000842001 Schistosoma margrebowiei SMRZ_0000842001 N 0.449
SMRZ_0001808901 Schistosoma margrebowiei SMRZ_0001808901 N 0.546
SMTD_0001017101 Schistosoma mattheei SMTD_0001017101 N 0.449
SMTD_0001194601 Schistosoma mattheei SMTD_0001194601 N 0.531
SMUV_0000232601 Syphacia muris SMUV_0000232601 N 0.444
SPAL_0001030300 Strongyloides papillosus SPAL_0001030300 N 0.461
SROB_0000153901 Schistosoma rodhaini SROB_0000153901 N 0.531
SROB_0000500401 Schistosoma rodhaini SROB_0000500401 N 0.458
SROB_0001061001 Schistosoma rodhaini SROB_0001061001 N 0.546
SSLN_0000493501 Schistocephalus solidus SSLN_0000493501 N 0.527
SSTP_0000371800 Strongyloides stercoralis SSTP_0000371800 N 0.461
SVE_0494300 Strongyloides venezuelensis SVE_0494300 N 0.461
T265_10726 Opisthorchis viverrini T265_10726 N 0.460
T265_12733 Opisthorchis viverrini T265_12733 N 0.506
T265_14643 Opisthorchis viverrini T265_14643 N 0.523
TCLT_0000879501 Thelazia callipaeda TCLT_0000879501 N 0.444
TCNE_0000567001 Toxocara canis TCNE_0000567001 N 0.444
TELCIR_07111 Teladorsagia circumcincta TELCIR_07111 N 0.463
TMUE_s0235000800 Trichuris muris TMUE_s0235000800 N 0.441
TRE_0000506801 Trichobilharzia regenti TRE_0000506801 N 0.495
TsM_000088100 Taenia solium TsM_000088100 N 0.467
TsM_000115400 Taenia solium TsM_000115400 N 0.577
TTAC_0000194001 Hydatigera taeniaeformis TTAC_0000194001 N 0.436
TTAC_0000225801 Hydatigera taeniaeformis TTAC_0000225801 N 0.555
TTRE_0000338301 Trichuris trichiura TTRE_0000338301 N 0.456