CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SMRZ_0001808901
(
Schistosoma margrebowiei
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
SMRZ_0001808901
T336940_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SMRZ_0001808901-mRNA-1
Sox
9
79
PKPPMTPYACFVQVIREEHRKKHPTENVIFSEFSKKCAEKWKLMNLEQRKCFEEMAKLDTERFNREMAHYI
SMRZ_0001808901-mRNA-1
Sox
99
165
PKRSWSAFFFFCDAFRSKIRSEHPDWKVSDIAKELGRRWEECSDKEKYERRAQNDKLRYEQDMEKYK
Links
Other
Sox
family TFs
Other
Schistosoma margrebowiei
TFs
92 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
hsf-1
Caenorhabditis elegans
WBGene00002004
D
0.000
PTRK_0001079800
Parastrongyloides trichosuri
PTRK_0001079800
I
0.000
L889_g598
Steinernema feltiae
L889_g598
I
0.000
L892_g820
Steinernema scapterisci
L892_g820
I
0.000
L898_g5106
Steinernema monticolum
L898_g5106
I
0.000
MhA1_Contig1076.frz3.gene4
Meloidogyne hapla
MhA1_Contig1076.frz3.gene4
I
0.000
nAv.1.0.1.g08619
Acanthocheilonema viteae
nAv.1.0.1.g08619
I
0.000
NBR_0001979501
Nippostrongylus brasiliensis
NBR_0001979501
I
0.000
nDi.2.2.2.g05157
Dirofilaria immitis
nDi.2.2.2.g05157
I
0.000
nLs.2.1.2.g08921
Litomosoides sigmodontis
nLs.2.1.2.g08921
I
0.000
nOo.2.0.1.g06259
Onchocerca ochengi
nOo.2.0.1.g06259
I
0.000
nRc.2.0.1.g30983
Romanomermis culicivorax
nRc.2.0.1.g30983
I
0.000
nRc.2.0.1.g38503
Romanomermis culicivorax
nRc.2.0.1.g38503
I
0.000
PTRK_0000997100
Parastrongyloides trichosuri
PTRK_0000997100
I
0.000
L596_g17815
Steinernema carpocapsae
L596_g17815
I
0.000
RSKR_0000052100
Rhabditophanes kr3021
RSKR_0000052100
I
0.000
SMUV_0000043201
Syphacia muris
SMUV_0000043201
I
0.000
SPAL_0000387400
Strongyloides papillosus
SPAL_0000387400
I
0.000
SPAL_0001635100
Strongyloides papillosus
SPAL_0001635100
I
0.000
SSTP_0000347800
Strongyloides stercoralis
SSTP_0000347800
I
0.000
SVE_0431600
Strongyloides venezuelensis
SVE_0431600
I
0.000
SVE_1155700
Strongyloides venezuelensis
SVE_1155700
I
0.000
SVUK_0000175201
Strongylus vulgaris
SVUK_0000175201
I
0.000
TCLT_0000441901
Thelazia callipaeda
TCLT_0000441901
I
0.000
TCNE_0000949901
Toxocara canis
TCNE_0000949901
I
0.000
BTMF_0001609701
Brugia timori
BTMF_0001609701
I
0.000
CBN21581
Caenorhabditis brenneri
CBN21581
I
0.000
CRE28338
Caenorhabditis remanei
CRE28338
I
0.000
LOAG_08901
Loa loa
LOAG_08901
I
0.000
WBGene00238233
Onchocerca volvulus
WBGene00238233
I
0.000
Minc16435
Meloidogyne incognita
Minc16435
I
0.000
ACOC_0000071501
Angiostrongylus costaricensis
ACOC_0000071501
I
0.000
ALUE_0000801801
Ascaris lumbricoides
ALUE_0000801801
I
0.000
ANCCAN_00795
Ancylostoma caninum
ANCCAN_00795
I
0.000
ANCCEY_01944
Ancylostoma ceylanicum
ANCCEY_01944
I
0.000
ASIM_0001223701
Anisakis simplex
ASIM_0001223701
I
0.000
ASU_10106
Ascaris suum
ASU_10106
I
0.000
Bm6746
Brugia malayi
Bm6746
I
0.000
BXY_0882000
Bursaphelenchus xylophilus
BXY_0882000
I
0.000
DICVIV_08378
Dictyocaulus viviparus
DICVIV_08378
I
0.000
DME_0000290701
Dracunculus medinensis
DME_0000290701
I
0.000
EEL_0000787901
Elaeophora elaphi
EEL_0000787901
I
0.000
EVEC_0000124901
Enterobius vermicularis
EVEC_0000124901
I
0.000
GPLIN_000109700
Globodera pallida
GPLIN_000109700
I
0.000
GPLIN_000673800
Globodera pallida
GPLIN_000673800
I
0.000
GPUH_0001175501
Gongylonema pulchrum
GPUH_0001175501
I
0.000
HCOI00423400
Haemonchus contortus
HCOI00423400
I
0.000
HCOI00424600
Haemonchus contortus
HCOI00424600
I
0.000