SROB_0000153901 (Schistosoma rodhaini)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 SROB_0000153901 T337010_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
SROB_0000153901-mRNA-1 Sox 10 80
SROB_0000153901-mRNA-1 Sox 100 166

Links

Other Sox family TFs
Other Schistosoma rodhaini TFs

240 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CpipJ_CPIJ014043 Culex pipiens CpipJ_CPIJ014043 N 0.523
WUBG_12099 Wuchereria bancrofti WUBG_12099 N 0.000
AAEL011380 Aedes aegypti AAEL011380 N 0.511
ACEP16613 Atta cephalotes ACEP16613 N 0.475
ACYPI007949 Acyrthosiphon pisum ACYPI007949 N 0.468
ADAC001494 Anopheles darlingi ADAC001494 N 0.511
AGAP000005 Anopheles gambiae AGAP000005 N 0.511
Aqu1.227714 Amphimedon queenslandica Aqu1.227714 N 0.434
Bm4180 Brugia malayi Bm4180 N 0.433
CapteG158220 Capitella teleta CapteG158220 N 0.470
CBG17468 Caenorhabditis briggsae CBG17468 N 0.428
CGI_10023724 Crassostrea gigas CGI_10023724 N 0.452
CJA09678 Caenorhabditis japonica CJA09678 N 0.428
CJA42049 Caenorhabditis japonica CJA42049 N 0.000
CPIJ014043 Culex quinquefasciatus CPIJ014043 N 0.523
CRE02943 Caenorhabditis remanei CRE02943 N 0.000
DAPPUDRAFT_232871 Daphnia pulex DAPPUDRAFT_232871 N 0.480
DAPPUDRAFT_306496 Daphnia pulex DAPPUDRAFT_306496 N 0.440
EFV53345 Trichinella spiralis EFV53345 N 0.421
EFV57410 Trichinella spiralis EFV57410 N 0.435
ENSBTAG00000031711 Bos taurus ENSBTAG00000031711 N 0.430
ENSCJAG00000007419 Callithrix jacchus ENSCJAG00000007419 N 0.000
ENSCJAG00000014214 Callithrix jacchus ENSCJAG00000014214 N 0.435
ENSCJAG00000022832 Callithrix jacchus ENSCJAG00000022832 N 0.435
ENSCJAG00000033322 Callithrix jacchus ENSCJAG00000033322 N 0.430
ENSCSAG00000013078 Chlorocebus sabaeus ENSCSAG00000013078 N 0.430
ENSDNOG00000005537 Dasypus novemcinctus ENSDNOG00000005537 N 0.435
ENSMPUG00000018359 Mustela putorius furo ENSMPUG00000018359 N 0.430
ENSOCUG00000021132 Oryctolagus cuniculus ENSOCUG00000021132 N 0.463
HMGB3 Oryctolagus cuniculus ENSOCUG00000024959 N 0.426
ENSPFOG00000008464 Poecilia formosa ENSPFOG00000008464 N 0.461
Hmgb2l1 Rattus norvegicus ENSRNOG00000013167 N 0.470
RGD1561694 Rattus norvegicus ENSRNOG00000029107 N 0.470
AABR07025074.1 Rattus norvegicus ENSRNOG00000032550 N 0.426
Hmgb2 Rattus norvegicus ENSRNOG00000033321 N 0.470
LOC688583 Rattus norvegicus ENSRNOG00000050910 N 0.430
ENSSSCG00000020770 Sus scrofa ENSSSCG00000020770 N 0.430
ENSSSCG00000024283 Sus scrofa ENSSSCG00000024283 N 0.430
ENSSTOG00000012404 Ictidomys tridecemlineatus ENSSTOG00000012404 N 0.000
hmgb1a Takifugu rubripes ENSTRUG00000008452 N 0.480
Dsp1 Drosophila melanogaster FBgn0011764 N 0.494
GA11488 Drosophila pseudoobscura FBgn0071539 N 0.494
GF19115 Drosophila ananassae FBgn0096126 N 0.494
GG17955 Drosophila erecta FBgn0110175 N 0.494
GH12282 Drosophila grimshawi FBgn0119761 N 0.494
GI10980 Drosophila mojavensis FBgn0133743 N 0.494
GD17278 Drosophila simulans FBgn0188840 N 0.494
GJ19445 Drosophila virilis FBgn0206588 N 0.494
GK25058 Drosophila willistoni FBgn0227017 N 0.494
GE17263 Drosophila yakuba FBgn0234741 N 0.494
HelroG157726 Helobdella robusta HelroG157726 N 0.439
HelroG157878 Helobdella robusta HelroG157878 N 0.527
HMEL007340 Heliconius melpomene HMEL007340 N 0.477
ISCW017350 Ixodes scapularis ISCW017350 N 0.505
LOAG_04936 Loa loa LOAG_04936 N 0.433
NV15664 Nasonia vitripennis NV15664 N 0.475
PHUM006290 Pediculus humanus PHUM006290 N 0.465
Ppa-hmg-1.2 Pristionchus pacificus PPA02361 N 0.445
SINV22586 Solenopsis invicta SINV22586 N 0.475
SMAR013695 Strigamia maritima SMAR013695 N 0.512
Smp_000980 Schistosoma mansoni Smp_000980 N 0.741
SPU_005572 Strongylocentrotus purpuratus SPU_005572 N 0.436
tetur02g08260 Tetranychus urticae tetur02g08260 N 0.480
tetur02g08340 Tetranychus urticae tetur02g08340 N 0.477
hmg-1.2 Caenorhabditis elegans WBGene00001972 N 0.423
WBGene00245261 Onchocerca volvulus WBGene00245261 N 0.433
Cflo_05895--XP_001121384.1_APIME Camponotus floridanus Cflo_05895--XP_001121384.1_APIME N 0.475
Hsal_13110--XP_001121384.1_APIME Harpegnathos saltator Hsal_13110--XP_001121384.1_APIME N 0.475
fgenesh2_pm.scaffold_24000033 Branchiostoma floridae fgenesh2_pm.scaffold_24000033 N 0.500
Sakowv30042012m.g Saccoglossus kowalevskii Sakowv30042012m.g N 0.465
SMU15016767 Schmidtea mediterranea SMU15016767 N 0.501
SMU15027649 Schmidtea mediterranea SMU15027649 N 0.448
Minc01077 Meloidogyne incognita Minc01077 N 0.000
Minc03268 Meloidogyne incognita Minc03268 N 0.000
Minc08988 Meloidogyne incognita Minc08988 N 0.000
AALB006743 Anopheles albimanus AALB006743 N 0.511
AARA010318 Anopheles arabiensis AARA010318 N 0.511
AATE010886 Anopheles atroparvus AATE010886 N 0.453
AATE018776 Anopheles atroparvus AATE018776 N 0.511
ACUA021022 Anopheles culicifacies ACUA021022 N 0.511
ADIR011701 Anopheles dirus ADIR011701 N 0.511
AEPI002924 Anopheles epiroticus AEPI002924 N 0.511
AFAF003948 Anopheles farauti AFAF003948 N 0.511
AFUN010134 Anopheles funestus AFUN010134 N 0.511
AMAM015540 Anopheles maculatus AMAM015540 N 0.511
AMEC021909 Anopheles melas AMEC021909 N 0.511
AMEM017336 Anopheles merus AMEM017336 N 0.511
AMIN005344 Anopheles minimus AMIN005344 N 0.511
ASIS000124 Anopheles sinensis ASIS000124 N 0.511
ASIS009950 Anopheles sinensis ASIS009950 N 0.447
ACAC_0001052301 Angiostrongylus cantonensis ACAC_0001052301 N 0.000
ACOC_0000768601 Angiostrongylus costaricensis ACOC_0000768601 N 0.452
ANCCAN_10156 Ancylostoma caninum ANCCAN_10156 N 0.432
ANCCEY_10333 Ancylostoma ceylanicum ANCCEY_10333 N 0.000
ASIM_0000048401 Anisakis simplex ASIM_0000048401 N 0.000
ASU_03902 Ascaris suum ASU_03902 N 0.433
augustus_masked-nMf.1.1.scaf01778-processed-gene-0.2 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf01778-processed-gene-0.2 N 0.483
BXY_1555400 Bursaphelenchus xylophilus BXY_1555400 N 0.449
BXY_1714600 Bursaphelenchus xylophilus BXY_1714600 N 0.000
csin110255 Clonorchis sinensis csin110255 N 0.544
D915_00818 Fasciola hepatica D915_00818 N 0.623
D915_15256 Fasciola hepatica D915_15256 N 0.548
D917_01254 Trichinella nativa D917_01254 N 0.435
D917_08189 Trichinella nativa D917_08189 N 0.442
D918_07195 Trichuris suis D918_07195 N 0.452
DILT_0001497901 Diphyllobothrium latum DILT_0001497901 N 0.609
DME_0001055201 Dracunculus medinensis DME_0001055201 N 0.451
ECANG7_02036 Echinococcus canadensis ECANG7_02036 N 0.595
EEL_0000068601 Elaeophora elaphi EEL_0000068601 N 0.433
EmuJ_001049000 Echinococcus multilocularis EmuJ_001049000 N 0.633
EVEC_0000577301 Enterobius vermicularis EVEC_0000577301 N 0.433
genemark-nMf.1.1.scaf06964-processed-gene-0.3 Meloidogyne floridensis genemark-nMf.1.1.scaf06964-processed-gene-0.3 N 0.483
GPUH_0001544201 Gongylonema pulchrum GPUH_0001544201 N 0.000
Hba_13817 Heterorhabditis bacteriophora Hba_13817 N 0.451
HCOI00860100 Haemonchus contortus HCOI00860100 N 0.452
HDID_0000237901 Hymenolepis diminuta HDID_0000237901 N 0.590
HmN_000466000 Hymenolepis microstoma HmN_000466000 N 0.590
HNAJ_0001249801 Hymenolepis nana HNAJ_0001249801 N 0.590
L596_g22130 Steinernema carpocapsae L596_g22130 N 0.433
L889_g13533 Steinernema feltiae L889_g13533 N 0.436
L892_g17551 Steinernema scapterisci L892_g17551 N 0.433
L893_g5947 Steinernema glaseri L893_g5947 N 0.436
MCOS_0000526101 Mesocestoides corti MCOS_0000526101 N 0.637
MhA1_Contig113.frz3.gene9 Meloidogyne hapla MhA1_Contig113.frz3.gene9 N 0.000
nAv.1.0.1.g02101 Acanthocheilonema viteae nAv.1.0.1.g02101 N 0.433
NBR_0000911001 Nippostrongylus brasiliensis NBR_0000911001 N 0.452
nDi.2.2.2.g04979 Dirofilaria immitis nDi.2.2.2.g04979 N 0.433
NECAME_09126 Necator americanus NECAME_09126 N 0.452
nLs.2.1.2.g00300 Litomosoides sigmodontis nLs.2.1.2.g00300 N 0.000
nRc.2.0.1.g43473 Romanomermis culicivorax nRc.2.0.1.g43473 N 0.445
PEQ_0000150901 Parascaris equorum PEQ_0000150901 N 0.433
PTRK_0000986200 Parastrongyloides trichosuri PTRK_0000986200 N 0.483
PXEA_0000566701 Protopolystoma xenopodis PXEA_0000566701 N 0.531
PXEA_0002175501 Protopolystoma xenopodis PXEA_0002175501 N 0.619
RSKR_0000605700 Rhabditophanes kr3021 RSKR_0000605700 N 0.449
SBAD_0000405201 Soboliphyme baturini SBAD_0000405201 N 0.445
scaffold580-EXSNAP2012.5 Pristionchus exspectatus scaffold580-EXSNAP2012.5 N 0.445
SCUD_0000020101 Schistosoma curassoni SCUD_0000020101 N 0.741
SMTD_0001194601 Schistosoma mattheei SMTD_0001194601 N 0.741
SMUV_0000232601 Syphacia muris SMUV_0000232601 N 0.437
SPAL_0001030300 Strongyloides papillosus SPAL_0001030300 N 0.483
SSLN_0000493501 Schistocephalus solidus SSLN_0000493501 N 0.609
SSTP_0000371800 Strongyloides stercoralis SSTP_0000371800 N 0.483
SVE_0494300 Strongyloides venezuelensis SVE_0494300 N 0.483
T265_12733 Opisthorchis viverrini T265_12733 N 0.680
T265_14643 Opisthorchis viverrini T265_14643 N 0.544
TCLT_0000879501 Thelazia callipaeda TCLT_0000879501 N 0.433
TCNE_0000567001 Toxocara canis TCNE_0000567001 N 0.433
TELCIR_06008 Teladorsagia circumcincta TELCIR_06008 N 0.000
TELCIR_07111 Teladorsagia circumcincta TELCIR_07111 N 0.452
TMUE_s0235000800 Trichuris muris TMUE_s0235000800 N 0.436
TsM_000115400 Taenia solium TsM_000115400 N 0.633
TTAC_0000225801 Hydatigera taeniaeformis TTAC_0000225801 N 0.595
TTRE_0000338301 Trichuris trichiura TTRE_0000338301 N 0.452