SROB_0001061001 (Schistosoma rodhaini)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 SROB_0001061001 T337019_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
SROB_0001061001-mRNA-1 Sox 9 79
SROB_0001061001-mRNA-1 Sox 99 165

Links

Other Sox family TFs
Other Schistosoma rodhaini TFs

92 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
WRKY46 Arabidopsis thaliana AT2G46400 D 0.000
WRKY62 Arabidopsis thaliana AT5G01900 D 0.000
WRKY62 Arabidopsis lyrata Al_scaffold_0006_13 I 0.000
BGIOSGA012571 Oryza indica BGIOSGA012571 I 0.000
BGIOSGA023706 Oryza indica BGIOSGA023706 I 0.000
Bo2g137260 Brassica oleracea Bo2g137260 I 0.000
Bo3g035140 Brassica oleracea Bo3g035140 I 0.000
Bo4g101290 Brassica oleracea Bo4g101290 I 0.000
Bra000203 Brassica rapa Bra000203 I 0.000
Bra000423 Brassica rapa Bra000423 I 0.000
Bra004586 Brassica rapa Bra004586 I 0.000
Bra014426 Brassica rapa Bra014426 I 0.000
BRADI1G17660 Brachypodium distachyon BRADI1G17660 I 0.000
BRADI1G63220 Brachypodium distachyon BRADI1G63220 I 0.000
F775_07376 Aegilops tauschii F775_07376 I 0.000
F775_15928 Aegilops tauschii F775_15928 I 0.000
F775_21933 Aegilops tauschii F775_21933 I 0.000
fgenesh1_pm.C_scaffold_5002145 Arabidopsis lyrata fgenesh1_pm.C_scaffold_5002145 I 0.000
GRMZM2G059562 Zea mays GRMZM2G059562 I 0.000
GRMZM2G381378 Zea mays GRMZM2G381378 I 0.000
GSMUA_Achr5G07490_001 Musa acuminata GSMUA_Achr5G07490_001 I 0.000
GSMUA_Achr5G08580_001 Musa acuminata GSMUA_Achr5G08580_001 I 0.000
LPERR05G16170 Leersia perrieri LPERR05G16170 I 0.000
LPERR07G23280 Leersia perrieri LPERR07G23280 I 0.000
MLOC_58019 Hordeum vulgare MLOC_58019 I 0.000
MLOC_74606 Hordeum vulgare MLOC_74606 I 0.000
MLOC_77883 Hordeum vulgare MLOC_77883 I 0.000
MLOC_78461 Hordeum vulgare MLOC_78461 I 0.000
OB03G26140 Oryza brachyantha OB03G26140 I 0.000
OB07G31890 Oryza brachyantha OB07G31890 I 0.000
OBART03G16400 Oryza barthii OBART03G16400 I 0.000
OBART05G20340 Oryza barthii OBART05G20340 I 0.000
OBART07G26430 Oryza barthii OBART07G26430 I 0.000
OGLUM03G16780 Oryza glumaepatula OGLUM03G16780 I 0.000
OGLUM05G21510 Oryza glumaepatula OGLUM05G21510 I 0.000
OGLUM07G26470 Oryza glumaepatula OGLUM07G26470 I 0.000
OLONG_008209 Oryza longistaminata OLONG_008209 I 0.000
OLONG_024544 Oryza longistaminata OLONG_024544 I 0.000
OMERI03G14670 Oryza meridionalis OMERI03G14670 I 0.000
OMERI05G18260 Oryza meridionalis OMERI05G18260 I 0.000
OMERI07G23060 Oryza meridionalis OMERI07G23060 I 0.000
OMERI11G01540 Oryza meridionalis OMERI11G01540 I 0.000
OMERI11G01580 Oryza meridionalis OMERI11G01580 I 0.000
ONIVA03G17390 Oryza nivara ONIVA03G17390 I 0.000
ONIVA07G26140 Oryza nivara ONIVA07G26140 I 0.000
OPUNC07G24890 Oryza punctata OPUNC07G24890 I 0.000
ORGLA07G0207800 Oryza glaberrima ORGLA07G0207800 I 0.000
ORUFI03G16960 Oryza rufipogon ORUFI03G16960 I 0.000
ORUFI07G27440 Oryza rufipogon ORUFI07G27440 I 0.000
OS03G0335200 Oryza sativa OS03G0335200 I 0.000
OS07G0680400 Oryza sativa OS07G0680400 I 0.000
PGSC0003DMG400016769 Solanum tuberosum PGSC0003DMG400016769 I 0.000
Sb01g036180 Sorghum bicolor Sb01g036180 I 0.000
Sb02g043030 Sorghum bicolor Sb02g043030 I 0.000
scaffold_800734.1 Arabidopsis lyrata scaffold_800734.1 I 0.000
SELMODRAFT_29702 Selaginella moellendorffii SELMODRAFT_29702 I 0.000
SELMODRAFT_29703 Selaginella moellendorffii SELMODRAFT_29703 I 0.000
Si002401m.g Setaria italica Si002401m.g I 0.000
Si030395m.g Setaria italica Si030395m.g I 0.000
Si036565m.g Setaria italica Si036565m.g I 0.000
TCM_011624 Theobroma cacao TCM_011624 I 0.000
Traes_4AS_0DA136E0E Triticum aestivum Traes_4AS_0DA136E0E I 0.000
Bostr.25993s0129 Boechera stricta Bostr.25993s0129 I 0.000
Cagra.0050s0059 Capsella grandiflora Cagra.0050s0059 I 0.000
Cagra.0255s0014 Capsella grandiflora Cagra.0255s0014 I 0.000
Carubv10012720m.g Capsella rubella Carubv10012720m.g I 0.000
Carubv10019489m.g Capsella rubella Carubv10019489m.g I 0.000
Carubv10023578m.g Capsella rubella Carubv10023578m.g I 0.000
Ciclev10007904m.g Citrus clementina Ciclev10007904m.g I 0.000
Eucgr.J02655 Eucalyptus grandis Eucgr.J02655 I 0.000
Gorai.003G150700 Gossypium raimondii Gorai.003G150700 I 0.000
Gorai.009G421200 Gossypium raimondii Gorai.009G421200 I 0.000
Gorai.012G119600 Gossypium raimondii Gorai.012G119600 I 0.000
Gorai.013G090200 Gossypium raimondii Gorai.013G090200 I 0.000
orange1.1g038951m.g Citrus sinensis orange1.1g038951m.g I 0.000
Pavir.Ba00227 Panicum virgatum Pavir.Ba00227 I 0.000
Pavir.Cb02194 Panicum virgatum Pavir.Cb02194 I 0.000
Pavir.Ea03258 Panicum virgatum Pavir.Ea03258 I 0.000
Pavir.Eb03563 Panicum virgatum Pavir.Eb03563 I 0.000
Pavir.Ha01933 Panicum virgatum Pavir.Ha01933 I 0.000
Pavir.Ib01568 Panicum virgatum Pavir.Ib01568 I 0.000
Pavir.J05812 Panicum virgatum Pavir.J05812 I 0.000
Pavir.J14149 Panicum virgatum Pavir.J14149 I 0.000
Pavir.J39511 Panicum virgatum Pavir.J39511 I 0.000
SapurV1A.0222s0350 Salix purpurea SapurV1A.0222s0350 I 0.000
PDK_20s1314561g002 Phoenix dactylifera PDK_20s1314561g002 I 0.000
BGIOSGA036756 Oryza indica BGIOSGA036756 N 0.000
LPERR11G00970 Leersia perrieri LPERR11G00970 N 0.000
LPERR12G01080 Leersia perrieri LPERR12G01080 N 0.000
OB11G10760 Oryza brachyantha OB11G10760 N 0.000
OB12G11030 Oryza brachyantha OB12G11030 N 0.000
OBART12G00850 Oryza barthii OBART12G00850 N 0.000
OMERI11G01570 Oryza meridionalis OMERI11G01570 N 0.000
OPUNC11G00980 Oryza punctata OPUNC11G00980 N 0.000
OPUNC12G00990 Oryza punctata OPUNC12G00990 N 0.000
ORGLA12G0007600 Oryza glaberrima ORGLA12G0007600 N 0.000
OS11G0117500 Oryza sativa OS11G0117500 N 0.000
OS12G0116700 Oryza sativa OS12G0116700 N 0.000
Sb08g002560 Sorghum bicolor Sb08g002560 N 0.000
Si010764m.g Setaria italica Si010764m.g N 0.000
Si019098m.g Setaria italica Si019098m.g N 0.000
Pavir.Bb03750 Panicum virgatum Pavir.Bb03750 N 0.000
Pavir.J34713 Panicum virgatum Pavir.J34713 N 0.000