eomesa (Danio rerio)
T-box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00907 (T-box) IPR001699 ENSDARG00000006640 T339762_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
EOMES
M03563_2.00 		Homo sapiens
DAGGTGTGAWNNN
NNNWTCACACCTH		 SELEX
Jolma et al.(2013)
EOMES_1 		0.884 0.934
EOMES
M03564_2.00 		Homo sapiens
TVACACNTNNNDRNGTGTGA
TCACACNYHNNNANGTGTBA		 SELEX
Jolma et al.(2013)
EOMES_2 		0.884 0.934
EOMES
M02752_2.00 		Homo sapiens
AGGTGTGAW
WTCACACCT		 SELEX
Jolma et al.(2010)
EOMES_monomer 		0.884 0.934
EOMES
M05807_2.00 		Homo sapiens
DAGGTGTGAN
NTCACACCTH		 SELEX
Yin et al.(2017)
EOMES_eDBD_HT-SELEX 		0.884 0.934
EOMES
M09647_2.00 		Homo sapiens
ARGTGWKAAN
NTTMWCACYT		 Misc
Heinz et al.(2010)
H9-Eomes_GSE26097 		0.884 0.934
EOMES
M05808_2.00 		Homo sapiens
NABGTGYKAH
DTMRCACVTN		 SELEX
Yin et al.(2017)
EOMES_eDBD_Methyl-HT-SELEX 		0.884 0.934
Eomes
M00215_2.00 		Mus musculus
RDGTGYBANN
NNTVRCACHY		 PBM
Badis et al.(2009)
Eomes_0921 		0.884 0.929
Tbr1
M01028_2.00 		Mus musculus
DTVRCAMNYH
DRNKTGYBAH		 PBM
SebePedros et al.(2013)
pTH2659 		0.846 0.869
TBR1
M03560_2.00 		Homo sapiens
AGGTGTGAAN
NTTCACACCT		 SELEX
Jolma et al.(2013)
TBR1_1 		0.846 0.869
TBR1
M03561_2.00 		Homo sapiens
RAGGTGTGAAH
DTTCACACCTY		 SELEX
Jolma et al.(2013)
TBR1_2 		0.846 0.869
Tbx21
M09428_2.00 		Mus musculus
DNDDSTGWSDND
HNHSWCASHHNH		 Misc
Kulakovskiy et al.(2013)
TBX21_MOUSE.H11MO.0.A 		0.785 0.732
Tbx21
M09648_2.00 		Mus musculus
ADGTGWSAHN
NDTSWCACHT		 Misc
Heinz et al.(2010)
CD8-Tbet_GSE33802 		0.785 0.732
TBX21
M03546_2.00 		Homo sapiens
GGTGTGAHDTMACACY
RGTGTKAHDTCACACC		 SELEX
Jolma et al.(2013)
TBX21_1 		0.785 0.727
TBX21
M03547_2.00 		Homo sapiens
DAGGTGTGAW
WTCACACCTH		 SELEX
Jolma et al.(2013)
TBX21_2 		0.785 0.727
TBX21
M03548_2.00 		Homo sapiens
TMACACYTNNDAGGTGTGA
TCACACCTHNNARGTGTKA		 SELEX
Jolma et al.(2013)
TBX21_3 		0.785 0.727
TBX21
M03549_2.00 		Homo sapiens
GGTGTGAWATCACACC
GGTGTGATWTCACACC		 SELEX
Jolma et al.(2013)
TBX21_4 		0.785 0.727
TBX21
M03550_2.00 		Homo sapiens
DAGGTGTGAW
WTCACACCTH		 SELEX
Jolma et al.(2013)
TBX21_5 		0.785 0.727
TBX21
M03551_2.00 		Homo sapiens
TSACACCWNMRAGGTGTGA
TCACACCTYKNWGGTGTSA		 SELEX
Jolma et al.(2013)
TBX21_6 		0.785 0.727
TBX21
M05793_2.00 		Homo sapiens
DAGGTGTKAN
NTMACACCTH		 SELEX
Yin et al.(2017)
TBX21_eDBD_HT-SELEX 		0.785 0.727
TBX21
M09425_2.00 		Homo sapiens
NDSDRGSTGWBRN
NYVWCASCYHSHN		 Misc
Kulakovskiy et al.(2013)
TBX21_HUMAN.H11MO.0.A 		0.785 0.727
TBX21
M05794_2.00 		Homo sapiens
DASGTGTKAW
WTMACACSTH		 SELEX
Yin et al.(2017)
TBX21_eDBD_Methyl-HT-SELEX 		0.785 0.727
A0A075Q982_PATMI
M00734_2.00 		Patiria miniata
NAGGTGTBAN
NTVACACCTN		 PBM
Cheatle-Jarvela et al.(2014)
PmTbr 		0.751 0.628
For this family, TFs with SR scores > 0.734 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000007733 T-box 212 399
ENSDARP00000111994 T-box 212 399

Links

Other T-box family TFs
Other Danio rerio TFs

162 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AtMYB70 Arabidopsis thaliana AT2G23290 D 0.000
MYB73 Arabidopsis thaliana AT4G37260 D 0.000
MYB44 Arabidopsis thaliana AT5G67300 D 0.000
PK07741.1 Cannabis sativa PK07741.1 D 0.000
PK28565.1 Cannabis sativa PK28565.1 D 0.000
MYB25 Arabidopsis lyrata Al_scaffold_0004_2572 I 0.000
AMTR_s00006p00225600 Amborella trichopoda AMTR_s00006p00225600 I 0.000
AMTR_s00007p00169630 Amborella trichopoda AMTR_s00007p00169630 I 0.000
MYB25 Arabidopsis thaliana AT2G39880 I 0.000
MYB109 Arabidopsis thaliana AT3G55730 I 0.000
BGIOSGA000485 Oryza indica BGIOSGA000485 I 0.000
Bo1g004900 Brassica oleracea Bo1g004900 I 0.000
Bo2g167960 Brassica oleracea Bo2g167960 I 0.000
Bo3g153550 Brassica oleracea Bo3g153550 I 0.000
Bo4g025810 Brassica oleracea Bo4g025810 I 0.000
Bo4g151410 Brassica oleracea Bo4g151410 I 0.000
Bo7g063830 Brassica oleracea Bo7g063830 I 0.000
Bo7g118450 Brassica oleracea Bo7g118450 I 0.000
Bo8g090160 Brassica oleracea Bo8g090160 I 0.000
Bra005006 Brassica rapa Bra005006 I 0.000
Bra007186 Brassica rapa Bra007186 I 0.000
Bra010593 Brassica rapa Bra010593 I 0.000
Bra011749 Brassica rapa Bra011749 I 0.000
Bra012149 Brassica rapa Bra012149 I 0.000
Bra032176 Brassica rapa Bra032176 I 0.000
BRADI2G55040 Brachypodium distachyon BRADI2G55040 I 0.000
AtMYB70 Arabidopsis lyrata fgenesh2_kg.4__260__AT2G23290.1 I 0.000
GLYMA01G39740 Glycine max GLYMA01G39740 I 0.000
GLYMA02G42030 Glycine max GLYMA02G42030 I 0.000
GLYMA02G43280 Glycine max GLYMA02G43280 I 0.000
GLYMA04G03910 Glycine max GLYMA04G03910 I 0.000
GLYMA04G04490 Glycine max GLYMA04G04490 I 0.000
GLYMA05G21220 Glycine max GLYMA05G21220 I 0.000
GLYMA11G05550 Glycine max GLYMA11G05550 I 0.000
GLYMA14G06320 Glycine max GLYMA14G06320 I 0.000
GLYMA14G06870 Glycine max GLYMA14G06870 I 0.000
GLYMA14G09540 Glycine max GLYMA14G09540 I 0.000
GLYMA17G35620 Glycine max GLYMA17G35620 I 0.000
GRMZM2G369799 Zea mays GRMZM2G369799 I 0.000
GSMUA_Achr1G09750_001 Musa acuminata GSMUA_Achr1G09750_001 I 0.000
GSMUA_Achr1G26140_001 Musa acuminata GSMUA_Achr1G26140_001 I 0.000
GSMUA_Achr3G13070_001 Musa acuminata GSMUA_Achr3G13070_001 I 0.000
GSMUA_Achr3G28230_001 Musa acuminata GSMUA_Achr3G28230_001 I 0.000
GSMUA_Achr4G09450_001 Musa acuminata GSMUA_Achr4G09450_001 I 0.000
GSMUA_Achr4G20150_001 Musa acuminata GSMUA_Achr4G20150_001 I 0.000
GSMUA_Achr5G28780_001 Musa acuminata GSMUA_Achr5G28780_001 I 0.000
GSMUA_Achr6G33470_001 Musa acuminata GSMUA_Achr6G33470_001 I 0.000
GSMUA_Achr8G25220_001 Musa acuminata GSMUA_Achr8G25220_001 I 0.000
GSMUA_Achr9G03720_001 Musa acuminata GSMUA_Achr9G03720_001 I 0.000
GSMUA_Achr9G22600_001 Musa acuminata GSMUA_Achr9G22600_001 I 0.000
GSMUA_AchrUn_randomG01280_001 Musa acuminata GSMUA_AchrUn_randomG01280_001 I 0.000
LPERR01G32110 Leersia perrieri LPERR01G32110 I 0.000
MTR_4g019370 Medicago truncatula MTR_4g019370 I 0.000
MTR_4g094982 Medicago truncatula MTR_4g094982 I 0.000
MTR_5g016510 Medicago truncatula MTR_5g016510 I 0.000
MTR_5g082910 Medicago truncatula MTR_5g082910 I 0.000
OB01G46120 Oryza brachyantha OB01G46120 I 0.000
OBART01G37390 Oryza barthii OBART01G37390 I 0.000
OGLUM01G41330 Oryza glumaepatula OGLUM01G41330 I 0.000
OLONG_001357 Oryza longistaminata OLONG_001357 I 0.000
OMERI01G34370 Oryza meridionalis OMERI01G34370 I 0.000
ONIVA01G42300 Oryza nivara ONIVA01G42300 I 0.000
OPUNC01G36300 Oryza punctata OPUNC01G36300 I 0.000
ORGLA01G0312200 Oryza glaberrima ORGLA01G0312200 I 0.000
ORUFI01G40770 Oryza rufipogon ORUFI01G40770 I 0.000
OS01G0850400 Oryza sativa OS01G0850400 I 0.000
PGSC0003DMG400003316 Solanum tuberosum PGSC0003DMG400003316 I 0.000
PGSC0003DMG400020338 Solanum tuberosum PGSC0003DMG400020338 I 0.000
PGSC0003DMG400024983 Solanum tuberosum PGSC0003DMG400024983 I 0.000
PGSC0003DMG400027190 Solanum tuberosum PGSC0003DMG400027190 I 0.000
POPTR_0002s12410 Populus trichocarpa POPTR_0002s12410 I 0.000
POPTR_0005s18620 Populus trichocarpa POPTR_0005s18620 I 0.000
POPTR_0008s07100 Populus trichocarpa POPTR_0008s07100 I 0.000
POPTR_0009s09890 Populus trichocarpa POPTR_0009s09890 I 0.000
POPTR_0014s02260 Populus trichocarpa POPTR_0014s02260 I 0.000
POPTR_0014s03440 Populus trichocarpa POPTR_0014s03440 I 0.000
PRUPE_ppa008450mg Prunus persica PRUPE_ppa008450mg I 0.000
PRUPE_ppa008979mg Prunus persica PRUPE_ppa008979mg I 0.000
PRUPE_ppa010735mg Prunus persica PRUPE_ppa010735mg I 0.000
PRUPE_ppa017892mg Prunus persica PRUPE_ppa017892mg I 0.000
PRUPE_ppa023154mg Prunus persica PRUPE_ppa023154mg I 0.000
AtMYB1 Arabidopsis lyrata scaffold_301043.1 I 0.000
ATMYBR1 Arabidopsis lyrata scaffold_803378.1 I 0.000
SELMODRAFT_113522 Selaginella moellendorffii SELMODRAFT_113522 I 0.000
SELMODRAFT_77255 Selaginella moellendorffii SELMODRAFT_77255 I 0.000
Si022959m.g Setaria italica Si022959m.g I 0.000
Si024344m.g Setaria italica Si024344m.g I 0.000
Solyc02g092930.1 Solanum lycopersicum Solyc02g092930.1 I 0.000
Solyc04g078420.1 Solanum lycopersicum Solyc04g078420.1 I 0.000
Solyc05g052850.2 Solanum lycopersicum Solyc05g052850.2 I 0.000
Solyc09g011780.2 Solanum lycopersicum Solyc09g011780.2 I 0.000
TCM_000696 Theobroma cacao TCM_000696 I 0.000
TCM_007138 Theobroma cacao TCM_007138 I 0.000
TCM_042474 Theobroma cacao TCM_042474 I 0.000
TCM_042629 Theobroma cacao TCM_042629 I 0.000
VIT_07s0129g01050 Vitis vinifera VIT_07s0129g01050 I 0.000
VIT_13s0019g03200 Vitis vinifera VIT_13s0019g03200 I 0.000
VIT_13s0067g01360 Vitis vinifera VIT_13s0067g01360 I 0.000
VIT_18s0001g09850 Vitis vinifera VIT_18s0001g09850 I 0.000
Ca_01522 Cicer arietinum Ca_01522 I 0.000
Ca_02182 Cicer arietinum Ca_02182 I 0.000
Ca_12468 Cicer arietinum Ca_12468 I 0.000
Cla004431 Citrullus lanatus Cla004431 I 0.000
Cla006872 Citrullus lanatus Cla006872 I 0.000
Cla014191 Citrullus lanatus Cla014191 I 0.000
Cla018417 Citrullus lanatus Cla018417 I 0.000
Cla020946 Citrullus lanatus Cla020946 I 0.000
Cla022947 Citrullus lanatus Cla022947 I 0.000
Pm005220 Prunus mume Pm005220 I 0.000
Pm005332 Prunus mume Pm005332 I 0.000
Pm018862 Prunus mume Pm018862 I 0.000
Pm021211 Prunus mume Pm021211 I 0.000
27798.m000612 Ricinus communis 27798.m000612 I 0.000
29801.m003096 Ricinus communis 29801.m003096 I 0.000
29814.m000736 Ricinus communis 29814.m000736 I 0.000
29970.m000987 Ricinus communis 29970.m000987 I 0.000
30170.m013698 Ricinus communis 30170.m013698 I 0.000
cassava1242.valid.m1 Manihot esculenta cassava1242.valid.m1 I 0.000
cassava2215.valid.m1 Manihot esculenta cassava2215.valid.m1 I 0.000
cassava41257.m1 Manihot esculenta cassava41257.m1 I 0.000
cassava43120.valid.m1 Manihot esculenta cassava43120.valid.m1 I 0.000
cassava47374.m1 Manihot esculenta cassava47374.m1 I 0.000
cassava7558.valid.m1 Manihot esculenta cassava7558.valid.m1 I 0.000
Cucsa.066910 Cucumis sativus Cucsa.066910 I 0.000
Cucsa.073130 Cucumis sativus Cucsa.073130 I 0.000
Cucsa.102710 Cucumis sativus Cucsa.102710 I 0.000
Cucsa.352560 Cucumis sativus Cucsa.352560 I 0.000
Cucsa.368410 Cucumis sativus Cucsa.368410 I 0.000
Cucsa.395890 Cucumis sativus Cucsa.395890 I 0.000
e_gw1.9.342.1 Physcomitrella patens e_gw1.9.342.1 I 0.000
gw1.10.6.1 Physcomitrella patens gw1.10.6.1 I 0.000
mgf002573m Mimulus guttatus mgf002573m I 0.000
mgf014089m Mimulus guttatus mgf014089m I 0.000
mgf020432m Mimulus guttatus mgf020432m I 0.000
mgf023922m Mimulus guttatus mgf023922m I 0.000
Aquca_007_00580 Aquilegia coerulea Aquca_007_00580 I 0.000
Aquca_007_00776 Aquilegia coerulea Aquca_007_00776 I 0.000
Aquca_009_00809 Aquilegia coerulea Aquca_009_00809 I 0.000
Aquca_045_00169 Aquilegia coerulea Aquca_045_00169 I 0.000
Aquca_083_00054 Aquilegia coerulea Aquca_083_00054 I 0.000
Bostr.0568s0154 Boechera stricta Bostr.0568s0154 I 0.000
Bostr.20505s0177 Boechera stricta Bostr.20505s0177 I 0.000
Bostr.22252s0145 Boechera stricta Bostr.22252s0145 I 0.000
Bostr.23794s0078 Boechera stricta Bostr.23794s0078 I 0.000
Bostr.27895s0157 Boechera stricta Bostr.27895s0157 I 0.000
Bostr.7867s1585 Boechera stricta Bostr.7867s1585 I 0.000
Cagra.0342s0017 Capsella grandiflora Cagra.0342s0017 I 0.000
Cagra.10445s0001 Capsella grandiflora Cagra.10445s0001 I 0.000
Cagra.1232s0025 Capsella grandiflora Cagra.1232s0025 I 0.000
Carubv10007638m.g Capsella rubella Carubv10007638m.g I 0.000
Carubv10023414m.g Capsella rubella Carubv10023414m.g I 0.000
Carubv10023692m.g Capsella rubella Carubv10023692m.g I 0.000
Carubv10027659m.g Capsella rubella Carubv10027659m.g I 0.000
Ciclev10001979m.g Citrus clementina Ciclev10001979m.g I 0.000
Ciclev10012003m.g Citrus clementina Ciclev10012003m.g I 0.000
Ciclev10026107m.g Citrus clementina Ciclev10026107m.g I 0.000
Ciclev10029124m.g Citrus clementina Ciclev10029124m.g I 0.000
Ciclev10031463m.g Citrus clementina Ciclev10031463m.g I 0.000
Ciclev10032317m.g Citrus clementina Ciclev10032317m.g I 0.000
Eucgr.F00002 Eucalyptus grandis Eucgr.F00002 I 0.000
Eucgr.H02226 Eucalyptus grandis Eucgr.H02226 I 0.000
Eucgr.J00189 Eucalyptus grandis Eucgr.J00189 I 0.000
Eucgr.J00250 Eucalyptus grandis Eucgr.J00250 I 0.000
Eucgr.K03010 Eucalyptus grandis Eucgr.K03010 I 0.000
evm.TU.supercontig_19.238 Carica papaya evm.TU.supercontig_19.238 I 0.000
evm.TU.supercontig_21.145 Carica papaya evm.TU.supercontig_21.145 I 0.000
evm.TU.supercontig_56.79 Carica papaya evm.TU.supercontig_56.79 I 0.000
evm.TU.supercontig_6.98 Carica papaya evm.TU.supercontig_6.98 I 0.000
gene00185-v1.0-hybrid Fragaria vesca gene00185-v1.0-hybrid I 0.000
gene09039-v1.0-hybrid Fragaria vesca gene09039-v1.0-hybrid I 0.000
gene20888-v1.0-hybrid Fragaria vesca gene20888-v1.0-hybrid I 0.000
gene21001-v1.0-hybrid Fragaria vesca gene21001-v1.0-hybrid I 0.000
gene24027-v1.0-hybrid Fragaria vesca gene24027-v1.0-hybrid I 0.000
gene26289-v1.0-hybrid Fragaria vesca gene26289-v1.0-hybrid I 0.000
Gorai.002G009300 Gossypium raimondii Gorai.002G009300 I 0.000
Gorai.005G234900 Gossypium raimondii Gorai.005G234900 I 0.000
Gorai.007G055600 Gossypium raimondii Gorai.007G055600 I 0.000
Gorai.007G218100 Gossypium raimondii Gorai.007G218100 I 0.000
Gorai.009G208900 Gossypium raimondii Gorai.009G208900 I 0.000
Gorai.009G215900 Gossypium raimondii Gorai.009G215900 I 0.000
Gorai.010G023500 Gossypium raimondii Gorai.010G023500 I 0.000
Gorai.011G278500 Gossypium raimondii Gorai.011G278500 I 0.000
Gorai.012G078200 Gossypium raimondii Gorai.012G078200 I 0.000
Lus10007503.g Linum usitatissimum Lus10007503.g I 0.000
Lus10010238.g Linum usitatissimum Lus10010238.g I 0.000
Lus10010260.g Linum usitatissimum Lus10010260.g I 0.000
Lus10021762.g Linum usitatissimum Lus10021762.g I 0.000
Lus10028250.g Linum usitatissimum Lus10028250.g I 0.000
Lus10028979.g Linum usitatissimum Lus10028979.g I 0.000
Lus10030336.g Linum usitatissimum Lus10030336.g I 0.000
Lus10040239.g Linum usitatissimum Lus10040239.g I 0.000
Lus10040940.g Linum usitatissimum Lus10040940.g I 0.000
MDP0000196986 Malus domestica MDP0000196986 I 0.000
MDP0000232454 Malus domestica MDP0000232454 I 0.000
MDP0000275800 Malus domestica MDP0000275800 I 0.000
MDP0000284922 Malus domestica MDP0000284922 I 0.000
MDP0000298689 Malus domestica MDP0000298689 I 0.000
MDP0000463846 Malus domestica MDP0000463846 I 0.000
MDP0000477900 Malus domestica MDP0000477900 I 0.000
MDP0000480596 Malus domestica MDP0000480596 I 0.000
MDP0000641708 Malus domestica MDP0000641708 I 0.000
MDP0000784297 Malus domestica MDP0000784297 I 0.000
MDP0000823270 Malus domestica MDP0000823270 I 0.000
MDP0000894463 Malus domestica MDP0000894463 I 0.000
orange1.1g012494m.g Citrus sinensis orange1.1g012494m.g I 0.000
orange1.1g017566m.g Citrus sinensis orange1.1g017566m.g I 0.000
orange1.1g021071m.g Citrus sinensis orange1.1g021071m.g I 0.000
orange1.1g022144m.g Citrus sinensis orange1.1g022144m.g I 0.000
orange1.1g040502m.g Citrus sinensis orange1.1g040502m.g I 0.000
orange1.1g046570m.g Citrus sinensis orange1.1g046570m.g I 0.000
Pavir.Ca02945 Panicum virgatum Pavir.Ca02945 I 0.000
Pavir.Cb00156 Panicum virgatum Pavir.Cb00156 I 0.000
SapurV1A.0167s0310 Salix purpurea SapurV1A.0167s0310 I 0.000
SapurV1A.0339s0020 Salix purpurea SapurV1A.0339s0020 I 0.000
SapurV1A.0597s0060 Salix purpurea SapurV1A.0597s0060 I 0.000
SapurV1A.0650s0070 Salix purpurea SapurV1A.0650s0070 I 0.000
SapurV1A.0708s0130 Salix purpurea SapurV1A.0708s0130 I 0.000
SapurV1A.0709s0060 Salix purpurea SapurV1A.0709s0060 I 0.000
SapurV1A.0919s0160 Salix purpurea SapurV1A.0919s0160 I 0.000
SapurV1A.1934s0020 Salix purpurea SapurV1A.1934s0020 I 0.000
Thhalv10000438m.g Eutrema salsugineum Thhalv10000438m.g I 0.000
Thhalv10004676m.g Eutrema salsugineum Thhalv10004676m.g I 0.000
Thhalv10010431m.g Eutrema salsugineum Thhalv10010431m.g I 0.000
Thhalv10016794m.g Eutrema salsugineum Thhalv10016794m.g I 0.000
Thhalv10021963m.g Eutrema salsugineum Thhalv10021963m.g I 0.000
Thhalv10025742m.g Eutrema salsugineum Thhalv10025742m.g I 0.000
PK01153.1 Cannabis sativa PK01153.1 I 0.000
PK16550.1 Cannabis sativa PK16550.1 I 0.000
PK17282.1 Cannabis sativa PK17282.1 I 0.000
chr2.CM0002.110.nc Lotus japonicus chr2.CM0002.110.nc I 0.000
chr2.CM0250.240.nd Lotus japonicus chr2.CM0250.240.nd I 0.000
chr2.LjT13M01.180.nd Lotus japonicus chr2.LjT13M01.180.nd I 0.000
chr5.CM0096.100.nc Lotus japonicus chr5.CM0096.100.nc I 0.000
CM0528.210.nd Lotus japonicus CM0528.210.nd I 0.000