TBX19 (Vicugna pacos)
T-box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00907 (T-box) IPR001699 ENSVPAG00000000446 T340592_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TBX19
M03562_2.00 		Homo sapiens
NDTVRCACVTANGTGYKANN
NNTMRCACNTABGTGYBAHN		 SELEX
Jolma et al.(2013)
TBX19_1 		0.912 0.983
TBX19
M05803_2.00 		Homo sapiens
NAGGTGYBAHWDTMRCACNTN
NANGTGYKAHWDTVRCACCTN		 SELEX
Yin et al.(2017)
TBX19_eDBD_HT-SELEX 		0.912 0.983
TBX19
M05804_2.00 		Homo sapiens
NANGTGYKAHWDTVRCACSTN
NASGTGYBAHWDTMRCACNTN		 SELEX
Yin et al.(2017)
TBX19_eDBD_Methyl-HT-SELEX 		0.912 0.983
T
M05809_2.00 		Homo sapiens
NANGTGYGAHWWNTVRCACCTN
NAGGTGYBANWWDTCRCACNTN		 SELEX
Yin et al.(2017)
T_eDBD_HT-SELEX_1 		0.868 0.830
T
M05810_2.00 		Homo sapiens
DTCRCAYVTABGTGYGAH
DTCRCACVTABRTGYGAH		 SELEX
Yin et al.(2017)
T_eDBD_HT-SELEX_2 		0.868 0.830
T
M09427_2.00 		Homo sapiens
BYNVCANNNVDGTGWKARDN
NHYTMWCACHBNNNTGBNRV		 Misc
Kulakovskiy et al.(2013)
BRAC_HUMAN.H11MO.0.A 		0.868 0.830
T
M09431_2.00 		Mus musculus
VVNRAWTTSACASNYHDVTGBNMAN
NTKNVCABHDRNSTGTSAAWTYNBB		 Misc
Kulakovskiy et al.(2013)
BRAC_MOUSE.H11MO.0.B 		0.868 0.830
T
M09651_2.00 		Mus musculus
NYTVDCASNNNNSTGHBARNN
NNYTVDCASNNNNSTGHBARN		 Misc
Heinz et al.(2010)
Mesoendoderm-Brachyury_GSE54963 		0.868 0.830
T
M11384_2.00 		Homo sapiens
MKHBTSACACSTAGGTGTGAAATK
MATTTCACACCTASGTGTSAVDMK		 Transfac
Matys et al.(2006)
V$BRACH_01 		0.868 0.830
T
M05811_2.00 		Homo sapiens
NABGTGYGAHWWNTVRCACSTN
NASGTGYBANWWDTCRCACVTN		 SELEX
Yin et al.(2017)
T_eDBD_Methyl-HT-SELEX_1 		0.868 0.830
T
M05812_2.00 		Homo sapiens
DTMRCAYVTABGTGYKAH
DTMRCACVTABRTGYKAH		 SELEX
Yin et al.(2017)
T_eDBD_Methyl-HT-SELEX_2 		0.868 0.830
byn
M03984_2.00 		Drosophila melanogaster
ABGTGYGADDD
HHHTCRCACVT		 SELEX
Nitta et al.(2015)
byn_1 		0.816 0.750
byn
M03985_2.00 		Drosophila melanogaster
DNGTGYBAHWWDTVRCACNH
DNGTGYBAHWWDTVRCACNH		 SELEX
Nitta et al.(2015)
byn_2 		0.816 0.750
byn
M03986_2.00 		Drosophila melanogaster
RDGTGYGADNDNDNNNNNNDRDGTGYGADD
HHTCRCACHYHNNNNNNHNHNHTCRCACHY		 SELEX
Nitta et al.(2015)
byn_3 		0.816 0.750
byn
M03987_2.00 		Drosophila melanogaster
NNTMRCAYNWWNRTGYKAHN
NDTMRCAYNWWNRTGYKANN		 SELEX
Nitta et al.(2015)
byn_4 		0.816 0.750
byn
M06453_2.00 		Drosophila melanogaster
ADGTGCDA
THGCACHT		 B1H
Zhu et al.(2011)
byn_FlyReg_FBgn0011723 		0.816 0.750
For this family, TFs with SR scores > 0.734 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSVPAP00000000417 T-box 43 218

Links

Other T-box family TFs
Other Vicugna pacos TFs

177 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
FLYWCH1 Macaca mulatta ENSMMUG00000015884 N
Myotis_brandtii_FLYWCH1_10002360 Myotis brandtii Myotis_brandtii_FLYWCH1_10002360 N
FLYWCH1 Tursiops truncatus ENSTTRG00000016604 N
ENSSTOG00000015412 Ictidomys tridecemlineatus ENSSTOG00000015412 N
FLYWCH1 Sus scrofa ENSSSCG00000028381 N
FLYWCH1 Pteropus vampyrus ENSPVAG00000008985 N
FLYWCH1 Pan troglodytes ENSPTRG00000007671 N
ENSPPYG00000007019 Pongo abelii ENSPPYG00000007019 N
ENSPANG00000009601 Papio anubis ENSPANG00000009601 N
FLYWCH1 Ochotona princeps ENSOPRG00000016761 N
FLYWCH1 Otolemur garnettii ENSOGAG00000013824 N
ENSNLEG00000009480 Nomascus leucogenys ENSNLEG00000009480 N
ENSMPUG00000015262 Mustela putorius furo ENSMPUG00000015262 N
ENSAMEG00000008370 Ailuropoda melanoleuca ENSAMEG00000008370 N
FLYWCH1 Myotis lucifugus ENSMLUG00000005535 N
FLYWCH1 Gorilla gorilla ENSGGOG00000001804 N
FLYWCH1 Homo sapiens ENSG00000059122 N
FLYWCH1 Felis catus ENSFCAG00000007271 N
FLYWCH1 Equus caballus ENSECAG00000003259 N
FLYWCH1 Dasypus novemcinctus ENSDNOG00000031962 N
ENSCSAG00000010349 Chlorocebus sabaeus ENSCSAG00000010349 N
FLYWCH1 Cavia porcellus ENSCPOG00000007496 N
FLYWCH1 Callithrix jacchus ENSCJAG00000015381 N
FLYWCH1 Canis familiaris ENSCAFG00000019343 N
FLYWCH1 Bos taurus ENSBTAG00000006117 N