CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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genemark-nMf.1.1.scaf10401-processed-gene-0.0
(
Meloidogyne floridensis
)
T-box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00907 (T-box)
IPR001699
genemark-nMf.1.1.scaf10401-processed-gene-0.0
T341712_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
genemark-nMf.1.1.scaf10401-processed-gene-0.0-mRNA-1
T-box
1
49
MHKYQPRIHIVRSNDVHSYKVANWSTTVFPETEFIAVTAYQNSQASNKF
Links
Other
T-box
family TFs
Other
Meloidogyne floridensis
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CJA04937
Caenorhabditis japonica
CJA04937
N
0.748
ENSAPLG00000008726
Anas platyrhynchos
ENSAPLG00000008726
N
0.756
GD16116
Drosophila simulans
FBgn0187752
N
0.748
LOAG_15011
Loa loa
LOAG_15011
N
0.750
Myotis_brandtii_TBX4_10031053
Myotis brandtii
Myotis_brandtii_TBX4_10031053
N
0.763
Minc08191
Meloidogyne incognita
Minc08191
N
0.833
BGLB010992
Biomphalaria glabrata
BGLB010992
N
0.738
BTMF_0001726401
Brugia timori
BTMF_0001726401
N
0.736
DILT_0001768201
Diphyllobothrium latum
DILT_0001768201
N
0.752
PEQ_0001168701
Parascaris equorum
PEQ_0001168701
N
0.736
PXEA_0002205701
Protopolystoma xenopodis
PXEA_0002205701
N
0.781
SMTD_0000415401
Schistosoma mattheei
SMTD_0000415401
N
0.748
SPER_0000972801
Spirometra erinaceieuropaei
SPER_0000972801
N
0.748